Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A1588:A1238
Extra
PDB:
ATOM 1 O3' C A1587 -36.417 -66.153 3.205 1.00 28.28 O
ATOM 2 P G A1588 -37.660 -67.150 3.390 1.00 30.39 P
ATOM 3 OP1 G A1588 -38.868 -66.567 2.752 1.00 40.70 O
ATOM 4 OP2 G A1588 -37.709 -67.568 4.813 1.00 40.70 O
ATOM 5 O5' G A1588 -37.267 -68.385 2.485 1.00 0.79 O
ATOM 6 C5' G A1588 -36.224 -69.262 2.887 1.00 0.79 C
ATOM 7 C4' G A1588 -36.777 -70.651 3.006 1.00 0.79 C
ATOM 8 O4' G A1588 -35.707 -71.579 3.278 1.00 0.79 O
ATOM 9 C3' G A1588 -37.799 -70.827 4.106 1.00 0.79 C
ATOM 10 O3' G A1588 -38.831 -71.666 3.638 1.00 0.79 O
ATOM 11 C2' G A1588 -36.988 -71.385 5.279 1.00 0.79 C
ATOM 12 O2' G A1588 -37.719 -72.304 6.057 1.00 0.79 O
ATOM 13 C1' G A1588 -35.780 -72.047 4.607 1.00 0.79 C
ATOM 14 N9 G A1588 -34.483 -71.712 5.192 1.00 37.85 N
ATOM 15 C8 G A1588 -34.169 -70.639 5.985 1.00 37.85 C
ATOM 16 N7 G A1588 -32.889 -70.531 6.216 1.00 37.85 N
ATOM 17 C5 G A1588 -32.332 -71.614 5.565 1.00 37.85 C
ATOM 18 C6 G A1588 -30.988 -71.994 5.428 1.00 37.85 C
ATOM 19 O6 G A1588 -29.979 -71.422 5.853 1.00 37.85 O
ATOM 20 N1 G A1588 -30.861 -73.161 4.687 1.00 37.85 N
ATOM 21 C2 G A1588 -31.899 -73.857 4.128 1.00 37.85 C
ATOM 22 N2 G A1588 -31.569 -74.948 3.427 1.00 37.85 N
ATOM 23 N3 G A1588 -33.163 -73.505 4.240 1.00 37.85 N
ATOM 24 C4 G A1588 -33.305 -72.377 4.964 1.00 37.85 C
ATOM 25 P C A1589 -40.167 -70.999 3.019 1.00 5.21 P
ATOM 26 OP1 C A1589 -39.925 -69.545 2.820 1.00 1.59 O
ATOM 27 OP2 C A1589 -41.365 -71.440 3.768 1.00 1.59 O
ATOM 28 O5' C A1589 -40.247 -71.640 1.570 1.00 24.18 O
TER
ATOM 1 O3' U B1237 -29.325 -75.727 2.142 1.00 2.45 O
ATOM 2 P C B1238 -27.958 -74.901 2.353 1.00 18.90 P
ATOM 3 OP1 C B1238 -28.293 -73.751 3.209 1.00 23.60 O
ATOM 4 OP2 C B1238 -27.311 -74.662 1.049 1.00 23.60 O
ATOM 5 O5' C B1238 -27.005 -75.869 3.176 1.00 8.40 O
ATOM 6 C5' C B1238 -26.821 -75.707 4.601 1.00 8.40 C
ATOM 7 C4' C B1238 -25.493 -76.298 5.035 1.00 8.40 C
ATOM 8 O4' C B1238 -25.529 -77.735 4.889 1.00 8.40 O
ATOM 9 C3' C B1238 -24.317 -75.836 4.197 1.00 8.40 C
ATOM 10 O3' C B1238 -23.743 -74.676 4.763 1.00 8.40 O
ATOM 11 C2' C B1238 -23.349 -76.997 4.269 1.00 8.40 C
ATOM 12 O2' C B1238 -22.558 -76.917 5.422 1.00 8.40 O
ATOM 13 C1' C B1238 -24.296 -78.195 4.362 1.00 8.40 C
ATOM 14 N1 C B1238 -24.558 -78.851 3.061 1.00 32.96 N
ATOM 15 C2 C B1238 -23.503 -79.458 2.379 1.00 32.96 C
ATOM 16 O2 C B1238 -22.368 -79.477 2.896 1.00 32.96 O
ATOM 17 N3 C B1238 -23.743 -80.016 1.176 1.00 32.96 N
ATOM 18 C4 C B1238 -24.971 -79.992 0.660 1.00 32.96 C
ATOM 19 N4 C B1238 -25.156 -80.528 -0.537 1.00 32.96 N
ATOM 20 C5 C B1238 -26.059 -79.412 1.340 1.00 32.96 C
ATOM 21 C6 C B1238 -25.814 -78.857 2.523 1.00 32.96 C
ATOM 22 P C B1239 -22.950 -73.654 3.823 1.00 34.81 P
ATOM 23 OP1 C B1239 -22.720 -72.412 4.589 1.00 28.02 O
ATOM 24 OP2 C B1239 -23.696 -73.593 2.540 1.00 28.02 O
ATOM 25 O5' C B1239 -21.538 -74.360 3.627 1.00 20.29 O
TER
ATOM 2 P G A1588 -37.660 -67.150 3.390 1.00 30.39 P
ATOM 3 OP1 G A1588 -38.868 -66.567 2.752 1.00 40.70 O
ATOM 4 OP2 G A1588 -37.709 -67.568 4.813 1.00 40.70 O
ATOM 5 O5' G A1588 -37.267 -68.385 2.485 1.00 0.79 O
ATOM 6 C5' G A1588 -36.224 -69.262 2.887 1.00 0.79 C
ATOM 7 C4' G A1588 -36.777 -70.651 3.006 1.00 0.79 C
ATOM 8 O4' G A1588 -35.707 -71.579 3.278 1.00 0.79 O
ATOM 9 C3' G A1588 -37.799 -70.827 4.106 1.00 0.79 C
ATOM 10 O3' G A1588 -38.831 -71.666 3.638 1.00 0.79 O
ATOM 11 C2' G A1588 -36.988 -71.385 5.279 1.00 0.79 C
ATOM 12 O2' G A1588 -37.719 -72.304 6.057 1.00 0.79 O
ATOM 13 C1' G A1588 -35.780 -72.047 4.607 1.00 0.79 C
ATOM 14 N9 G A1588 -34.483 -71.712 5.192 1.00 37.85 N
ATOM 15 C8 G A1588 -34.169 -70.639 5.985 1.00 37.85 C
ATOM 16 N7 G A1588 -32.889 -70.531 6.216 1.00 37.85 N
ATOM 17 C5 G A1588 -32.332 -71.614 5.565 1.00 37.85 C
ATOM 18 C6 G A1588 -30.988 -71.994 5.428 1.00 37.85 C
ATOM 19 O6 G A1588 -29.979 -71.422 5.853 1.00 37.85 O
ATOM 20 N1 G A1588 -30.861 -73.161 4.687 1.00 37.85 N
ATOM 21 C2 G A1588 -31.899 -73.857 4.128 1.00 37.85 C
ATOM 22 N2 G A1588 -31.569 -74.948 3.427 1.00 37.85 N
ATOM 23 N3 G A1588 -33.163 -73.505 4.240 1.00 37.85 N
ATOM 24 C4 G A1588 -33.305 -72.377 4.964 1.00 37.85 C
ATOM 25 P C A1589 -40.167 -70.999 3.019 1.00 5.21 P
ATOM 26 OP1 C A1589 -39.925 -69.545 2.820 1.00 1.59 O
ATOM 27 OP2 C A1589 -41.365 -71.440 3.768 1.00 1.59 O
ATOM 28 O5' C A1589 -40.247 -71.640 1.570 1.00 24.18 O
TER
ATOM 1 O3' U B1237 -29.325 -75.727 2.142 1.00 2.45 O
ATOM 2 P C B1238 -27.958 -74.901 2.353 1.00 18.90 P
ATOM 3 OP1 C B1238 -28.293 -73.751 3.209 1.00 23.60 O
ATOM 4 OP2 C B1238 -27.311 -74.662 1.049 1.00 23.60 O
ATOM 5 O5' C B1238 -27.005 -75.869 3.176 1.00 8.40 O
ATOM 6 C5' C B1238 -26.821 -75.707 4.601 1.00 8.40 C
ATOM 7 C4' C B1238 -25.493 -76.298 5.035 1.00 8.40 C
ATOM 8 O4' C B1238 -25.529 -77.735 4.889 1.00 8.40 O
ATOM 9 C3' C B1238 -24.317 -75.836 4.197 1.00 8.40 C
ATOM 10 O3' C B1238 -23.743 -74.676 4.763 1.00 8.40 O
ATOM 11 C2' C B1238 -23.349 -76.997 4.269 1.00 8.40 C
ATOM 12 O2' C B1238 -22.558 -76.917 5.422 1.00 8.40 O
ATOM 13 C1' C B1238 -24.296 -78.195 4.362 1.00 8.40 C
ATOM 14 N1 C B1238 -24.558 -78.851 3.061 1.00 32.96 N
ATOM 15 C2 C B1238 -23.503 -79.458 2.379 1.00 32.96 C
ATOM 16 O2 C B1238 -22.368 -79.477 2.896 1.00 32.96 O
ATOM 17 N3 C B1238 -23.743 -80.016 1.176 1.00 32.96 N
ATOM 18 C4 C B1238 -24.971 -79.992 0.660 1.00 32.96 C
ATOM 19 N4 C B1238 -25.156 -80.528 -0.537 1.00 32.96 N
ATOM 20 C5 C B1238 -26.059 -79.412 1.340 1.00 32.96 C
ATOM 21 C6 C B1238 -25.814 -78.857 2.523 1.00 32.96 C
ATOM 22 P C B1239 -22.950 -73.654 3.823 1.00 34.81 P
ATOM 23 OP1 C B1239 -22.720 -72.412 4.589 1.00 28.02 O
ATOM 24 OP2 C B1239 -23.696 -73.593 2.540 1.00 28.02 O
ATOM 25 O5' C B1239 -21.538 -74.360 3.627 1.00 20.29 O
TER
Atoms:
OP1: (-38.868,-66.567,2.752)
OP2: (-37.709,-67.568,4.813)
C3': (-37.799,-70.827,4.106)
C1': (-35.780,-72.047,4.607)
C5': (-36.224,-69.262,2.887)
O6: (-29.979,-71.422,5.853)
O4': (-35.707,-71.579,3.278)
C8: (-34.169,-70.639,5.985)
C2: (-31.899,-73.857,4.128)
C6: (-30.988,-71.994,5.428)
C5: (-32.332,-71.614,5.565)
C4: (-33.305,-72.377,4.964)
P: (-37.660,-67.150,3.390)
C4': (-36.777,-70.651,3.006)
C2': (-36.988,-71.385,5.279)
O2': (-37.719,-72.304,6.057)
N1: (-30.861,-73.161,4.687)
N2: (-31.569,-74.948,3.427)
N3: (-33.163,-73.505,4.240)
N7: (-32.889,-70.531,6.216)
N9: (-34.483,-71.712,5.192)
O5': (-37.267,-68.385,2.485)
O3': (-38.831,-71.666,3.638)
OP2: (-37.709,-67.568,4.813)
C3': (-37.799,-70.827,4.106)
C1': (-35.780,-72.047,4.607)
C5': (-36.224,-69.262,2.887)
O6: (-29.979,-71.422,5.853)
O4': (-35.707,-71.579,3.278)
C8: (-34.169,-70.639,5.985)
C2: (-31.899,-73.857,4.128)
C6: (-30.988,-71.994,5.428)
C5: (-32.332,-71.614,5.565)
C4: (-33.305,-72.377,4.964)
P: (-37.660,-67.150,3.390)
C4': (-36.777,-70.651,3.006)
C2': (-36.988,-71.385,5.279)
O2': (-37.719,-72.304,6.057)
N1: (-30.861,-73.161,4.687)
N2: (-31.569,-74.948,3.427)
N3: (-33.163,-73.505,4.240)
N7: (-32.889,-70.531,6.216)
N9: (-34.483,-71.712,5.192)
O5': (-37.267,-68.385,2.485)
O3': (-38.831,-71.666,3.638)
C2: (-23.503,-79.458,2.379)
OP1: (-28.293,-73.751,3.209)
OP2: (-27.311,-74.662,1.049)
C4: (-24.971,-79.992,0.660)
O5': (-27.005,-75.869,3.176)
C3': (-24.317,-75.836,4.197)
C1': (-24.296,-78.195,4.362)
O4': (-25.529,-77.735,4.889)
C5': (-26.821,-75.707,4.601)
P: (-27.958,-74.901,2.353)
O2: (-22.368,-79.477,2.896)
C4': (-25.493,-76.298,5.035)
C2': (-23.349,-76.997,4.269)
O2': (-22.558,-76.917,5.422)
N1: (-24.558,-78.851,3.061)
N3: (-23.743,-80.016,1.176)
N4: (-25.156,-80.528,-0.537)
C6: (-25.814,-78.857,2.523)
C5: (-26.059,-79.412,1.340)
O3': (-23.743,-74.676,4.763)
OP1: (-28.293,-73.751,3.209)
OP2: (-27.311,-74.662,1.049)
C4: (-24.971,-79.992,0.660)
O5': (-27.005,-75.869,3.176)
C3': (-24.317,-75.836,4.197)
C1': (-24.296,-78.195,4.362)
O4': (-25.529,-77.735,4.889)
C5': (-26.821,-75.707,4.601)
P: (-27.958,-74.901,2.353)
O2: (-22.368,-79.477,2.896)
C4': (-25.493,-76.298,5.035)
C2': (-23.349,-76.997,4.269)
O2': (-22.558,-76.917,5.422)
N1: (-24.558,-78.851,3.061)
N3: (-23.743,-80.016,1.176)
N4: (-25.156,-80.528,-0.537)
C6: (-25.814,-78.857,2.523)
C5: (-26.059,-79.412,1.340)
O3': (-23.743,-74.676,4.763)
Image (generated by PyMOL):