ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQE:A565:A732

Extra

PDB:
ATOM 1 O3' C A 564 136.307 107.591 -34.148 1.00 27.00 O
ATOM 2 P G A 565 134.860 108.023 -34.715 1.00 27.57 P
ATOM 3 OP1 G A 565 134.310 109.007 -33.732 1.00 29.22 O
ATOM 4 OP2 G A 565 134.076 106.820 -35.075 1.00 26.12 O
ATOM 5 O5' G A 565 135.196 108.793 -36.052 1.00 27.36 O
ATOM 6 C5' G A 565 136.000 109.973 -36.014 1.00 29.13 C
ATOM 7 C4' G A 565 135.922 110.690 -37.331 1.00 31.83 C
ATOM 8 O4' G A 565 136.423 109.807 -38.376 1.00 32.54 O
ATOM 9 C3' G A 565 134.529 111.146 -37.767 1.00 33.45 C
ATOM 10 O3' G A 565 134.590 112.414 -38.368 1.00 34.59 O
ATOM 11 C2' G A 565 134.146 110.152 -38.855 1.00 33.73 C
ATOM 12 O2' G A 565 133.340 110.736 -39.871 1.00 36.26 O
ATOM 13 C1' G A 565 135.504 109.767 -39.436 1.00 31.06 C
ATOM 14 N9 G A 565 135.429 108.414 -39.965 1.00 27.76 N
ATOM 15 C8 G A 565 135.356 107.234 -39.267 1.00 26.16 C
ATOM 16 N7 G A 565 135.142 106.203 -40.039 1.00 24.54 N
ATOM 17 C5 G A 565 135.105 106.738 -41.319 1.00 25.43 C
ATOM 18 C6 G A 565 134.877 106.117 -42.571 1.00 26.71 C
ATOM 19 O6 G A 565 134.637 104.928 -42.813 1.00 29.15 O
ATOM 20 N1 G A 565 134.940 107.032 -43.613 1.00 25.87 N
ATOM 21 C2 G A 565 135.180 108.367 -43.470 1.00 27.45 C
ATOM 22 N2 G A 565 135.198 109.091 -44.600 1.00 29.84 N
ATOM 23 N3 G A 565 135.384 108.958 -42.311 1.00 26.70 N
ATOM 24 C4 G A 565 135.326 108.091 -41.287 1.00 26.05 C
ATOM 25 P G A 566 133.373 113.437 -38.189 1.00 33.91 P
ATOM 26 OP1 G A 566 133.636 114.159 -36.895 1.00 32.21 O
ATOM 27 OP2 G A 566 132.100 112.713 -38.388 1.00 35.65 O
ATOM 28 O5' G A 566 133.587 114.440 -39.397 1.00 34.13 O
TER

ATOM 1 O3' A B 731 133.169 109.347 -47.013 1.00 34.48 O
ATOM 2 P C B 732 133.039 107.745 -47.161 1.00 34.79 P
ATOM 3 OP1 C B 732 131.598 107.378 -47.193 1.00 35.70 O
ATOM 4 OP2 C B 732 133.895 107.149 -46.112 1.00 35.67 O
ATOM 5 O5' C B 732 133.662 107.431 -48.606 1.00 33.96 O
ATOM 6 C5' C B 732 135.057 107.671 -48.868 1.00 34.77 C
ATOM 7 C4' C B 732 135.387 107.365 -50.308 1.00 35.97 C
ATOM 8 O4' C B 732 134.500 108.111 -51.175 1.00 37.29 O
ATOM 9 C3' C B 732 136.792 107.770 -50.737 1.00 37.13 C
ATOM 10 O3' C B 732 137.707 106.695 -50.471 1.00 37.78 O
ATOM 11 C2' C B 732 136.647 108.031 -52.239 1.00 36.77 C
ATOM 12 O2' C B 732 136.865 106.879 -53.033 1.00 38.14 O
ATOM 13 C1' C B 732 135.187 108.478 -52.355 1.00 35.59 C
ATOM 14 N1 C B 732 134.942 109.908 -52.622 1.00 34.64 N
ATOM 15 C2 C B 732 135.342 110.870 -51.689 1.00 34.00 C
ATOM 16 O2 C B 732 135.909 110.503 -50.658 1.00 34.77 O
ATOM 17 N3 C B 732 135.097 112.177 -51.940 1.00 33.44 N
ATOM 18 C4 C B 732 134.479 112.534 -53.072 1.00 33.68 C
ATOM 19 N4 C B 732 134.252 113.830 -53.283 1.00 32.21 N
ATOM 20 C5 C B 732 134.066 111.578 -54.039 1.00 32.93 C
ATOM 21 C6 C B 732 134.316 110.290 -53.777 1.00 34.66 C
ATOM 22 P G B 733 139.277 106.993 -50.254 1.00 37.13 P
ATOM 23 OP1 G B 733 139.824 107.551 -51.544 1.00 35.72 O
ATOM 24 OP2 G B 733 139.823 105.721 -49.708 1.00 37.93 O
ATOM 25 O5' G B 733 139.324 108.108 -49.087 1.00 34.04 O
TER

Atoms:
OP1: (134.310,109.007,-33.732)
OP2: (134.076,106.820,-35.075)
C3': (134.529,111.146,-37.767)
C1': (135.504,109.767,-39.436)
C5': (136.000,109.973,-36.014)
O6: (134.637,104.928,-42.813)
O4': (136.423,109.807,-38.376)
C8: (135.356,107.234,-39.267)
C2: (135.180,108.367,-43.470)
C6: (134.877,106.117,-42.571)
C5: (135.105,106.738,-41.319)
C4: (135.326,108.091,-41.287)
P: (134.860,108.023,-34.715)
C4': (135.922,110.690,-37.331)
C2': (134.146,110.152,-38.855)
O2': (133.340,110.736,-39.871)
N1: (134.940,107.032,-43.613)
N2: (135.198,109.091,-44.600)
N3: (135.384,108.958,-42.311)
N7: (135.142,106.203,-40.039)
N9: (135.429,108.414,-39.965)
O5': (135.196,108.793,-36.052)
O3': (134.590,112.414,-38.368)
C2: (135.342,110.870,-51.689)
OP1: (131.598,107.378,-47.193)
OP2: (133.895,107.149,-46.112)
C4: (134.479,112.534,-53.072)
O5': (133.662,107.431,-48.606)
C3': (136.792,107.770,-50.737)
C1': (135.187,108.478,-52.355)
O4': (134.500,108.111,-51.175)
C5': (135.057,107.671,-48.868)
P: (133.039,107.745,-47.161)
O2: (135.909,110.503,-50.658)
C4': (135.387,107.365,-50.308)
C2': (136.647,108.031,-52.239)
O2': (136.865,106.879,-53.033)
N1: (134.942,109.908,-52.622)
N3: (135.097,112.177,-51.940)
N4: (134.252,113.830,-53.283)
C6: (134.316,110.290,-53.777)
C5: (134.066,111.578,-54.039)
O3': (137.707,106.695,-50.471)
Image (generated by PyMOL):
PyMOL image
show in jmol