Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A2513:A2491
Extra
PDB:
ATOM 1 O3' G A2512 66.968 -39.356 -0.417 1.00 35.87 O
ATOM 2 P G A2513 67.346 -40.793 0.224 1.00 47.88 P
ATOM 3 OP1 G A2513 66.192 -41.265 1.055 1.00 40.72 O
ATOM 4 OP2 G A2513 68.702 -40.661 0.829 1.00 42.09 O
ATOM 5 O5' G A2513 67.458 -41.766 -1.021 1.00 41.35 O
ATOM 6 C5' G A2513 66.491 -41.704 -2.041 1.00 44.66 C
ATOM 7 C4' G A2513 67.070 -42.194 -3.327 1.00 42.28 C
ATOM 8 O4' G A2513 68.148 -41.332 -3.762 1.00 49.58 O
ATOM 9 C3' G A2513 67.738 -43.545 -3.278 1.00 41.34 C
ATOM 10 O3' G A2513 66.800 -44.582 -3.277 1.00 43.35 O
ATOM 11 C2' G A2513 68.564 -43.529 -4.549 1.00 42.28 C
ATOM 12 O2' G A2513 67.773 -43.794 -5.689 1.00 38.35 O
ATOM 13 C1' G A2513 69.045 -42.080 -4.569 1.00 46.01 C
ATOM 14 N9 G A2513 70.377 -42.065 -3.983 1.00 45.46 N
ATOM 15 C8 G A2513 70.707 -42.158 -2.657 1.00 48.33 C
ATOM 16 N7 G A2513 71.990 -42.267 -2.460 1.00 51.62 N
ATOM 17 C5 G A2513 72.537 -42.208 -3.730 1.00 47.63 C
ATOM 18 C6 G A2513 73.877 -42.306 -4.149 1.00 50.50 C
ATOM 19 O6 G A2513 74.880 -42.520 -3.460 1.00 56.36 O
ATOM 20 N1 G A2513 73.995 -42.165 -5.527 1.00 47.79 N
ATOM 21 C2 G A2513 72.944 -41.990 -6.394 1.00 45.52 C
ATOM 22 N2 G A2513 73.249 -41.861 -7.698 1.00 46.42 N
ATOM 23 N3 G A2513 71.684 -41.939 -6.013 1.00 45.21 N
ATOM 24 C4 G A2513 71.557 -42.047 -4.677 1.00 45.47 C
ATOM 25 P U A2514 67.106 -45.899 -2.435 1.00 43.55 P
ATOM 26 OP1 U A2514 65.812 -46.510 -2.059 1.00 52.69 O
ATOM 27 OP2 U A2514 68.074 -45.523 -1.362 1.00 47.61 O
ATOM 28 O5' U A2514 67.741 -46.873 -3.530 1.00 40.79 O
TER
ATOM 1 O3' U B2490 77.428 -43.550 -5.968 1.00 63.25 O
ATOM 2 P C B2491 77.403 -42.617 -7.297 1.00 54.24 P
ATOM 3 OP1 C B2491 78.207 -41.377 -7.107 1.00 53.95 O
ATOM 4 OP2 C B2491 75.977 -42.500 -7.679 1.00 44.38 O
ATOM 5 O5' C B2491 78.042 -43.498 -8.462 1.00 40.84 O
ATOM 6 C5' C B2491 77.342 -44.629 -8.976 1.00 42.52 C
ATOM 7 C4' C B2491 77.100 -44.497 -10.473 1.00 42.98 C
ATOM 8 O4' C B2491 76.474 -45.738 -10.917 1.00 39.85 O
ATOM 9 C3' C B2491 76.137 -43.378 -10.895 1.00 42.14 C
ATOM 10 O3' C B2491 76.811 -42.203 -11.344 1.00 42.07 O
ATOM 11 C2' C B2491 75.366 -43.992 -12.050 1.00 38.32 C
ATOM 12 O2' C B2491 76.044 -43.849 -13.288 1.00 30.61 O
ATOM 13 C1' C B2491 75.266 -45.454 -11.604 1.00 41.45 C
ATOM 14 N1 C B2491 74.158 -45.642 -10.638 1.00 43.47 N
ATOM 15 C2 C B2491 72.823 -45.585 -11.076 1.00 39.34 C
ATOM 16 O2 C B2491 72.593 -45.483 -12.299 1.00 38.47 O
ATOM 17 N3 C B2491 71.824 -45.652 -10.146 1.00 36.86 N
ATOM 18 C4 C B2491 72.130 -45.779 -8.843 1.00 34.49 C
ATOM 19 N4 C B2491 71.142 -45.788 -7.941 1.00 28.74 N
ATOM 20 C5 C B2491 73.466 -45.894 -8.394 1.00 41.15 C
ATOM 21 C6 C B2491 74.437 -45.828 -9.312 1.00 43.66 C
ATOM 22 P A B2492 75.966 -40.844 -11.588 1.00 46.35 P
ATOM 23 OP1 A B2492 76.774 -39.861 -12.380 1.00 38.54 O
ATOM 24 OP2 A B2492 75.412 -40.447 -10.275 1.00 40.37 O
ATOM 25 O5' A B2492 74.714 -41.282 -12.461 1.00 48.89 O
TER
ATOM 2 P G A2513 67.346 -40.793 0.224 1.00 47.88 P
ATOM 3 OP1 G A2513 66.192 -41.265 1.055 1.00 40.72 O
ATOM 4 OP2 G A2513 68.702 -40.661 0.829 1.00 42.09 O
ATOM 5 O5' G A2513 67.458 -41.766 -1.021 1.00 41.35 O
ATOM 6 C5' G A2513 66.491 -41.704 -2.041 1.00 44.66 C
ATOM 7 C4' G A2513 67.070 -42.194 -3.327 1.00 42.28 C
ATOM 8 O4' G A2513 68.148 -41.332 -3.762 1.00 49.58 O
ATOM 9 C3' G A2513 67.738 -43.545 -3.278 1.00 41.34 C
ATOM 10 O3' G A2513 66.800 -44.582 -3.277 1.00 43.35 O
ATOM 11 C2' G A2513 68.564 -43.529 -4.549 1.00 42.28 C
ATOM 12 O2' G A2513 67.773 -43.794 -5.689 1.00 38.35 O
ATOM 13 C1' G A2513 69.045 -42.080 -4.569 1.00 46.01 C
ATOM 14 N9 G A2513 70.377 -42.065 -3.983 1.00 45.46 N
ATOM 15 C8 G A2513 70.707 -42.158 -2.657 1.00 48.33 C
ATOM 16 N7 G A2513 71.990 -42.267 -2.460 1.00 51.62 N
ATOM 17 C5 G A2513 72.537 -42.208 -3.730 1.00 47.63 C
ATOM 18 C6 G A2513 73.877 -42.306 -4.149 1.00 50.50 C
ATOM 19 O6 G A2513 74.880 -42.520 -3.460 1.00 56.36 O
ATOM 20 N1 G A2513 73.995 -42.165 -5.527 1.00 47.79 N
ATOM 21 C2 G A2513 72.944 -41.990 -6.394 1.00 45.52 C
ATOM 22 N2 G A2513 73.249 -41.861 -7.698 1.00 46.42 N
ATOM 23 N3 G A2513 71.684 -41.939 -6.013 1.00 45.21 N
ATOM 24 C4 G A2513 71.557 -42.047 -4.677 1.00 45.47 C
ATOM 25 P U A2514 67.106 -45.899 -2.435 1.00 43.55 P
ATOM 26 OP1 U A2514 65.812 -46.510 -2.059 1.00 52.69 O
ATOM 27 OP2 U A2514 68.074 -45.523 -1.362 1.00 47.61 O
ATOM 28 O5' U A2514 67.741 -46.873 -3.530 1.00 40.79 O
TER
ATOM 1 O3' U B2490 77.428 -43.550 -5.968 1.00 63.25 O
ATOM 2 P C B2491 77.403 -42.617 -7.297 1.00 54.24 P
ATOM 3 OP1 C B2491 78.207 -41.377 -7.107 1.00 53.95 O
ATOM 4 OP2 C B2491 75.977 -42.500 -7.679 1.00 44.38 O
ATOM 5 O5' C B2491 78.042 -43.498 -8.462 1.00 40.84 O
ATOM 6 C5' C B2491 77.342 -44.629 -8.976 1.00 42.52 C
ATOM 7 C4' C B2491 77.100 -44.497 -10.473 1.00 42.98 C
ATOM 8 O4' C B2491 76.474 -45.738 -10.917 1.00 39.85 O
ATOM 9 C3' C B2491 76.137 -43.378 -10.895 1.00 42.14 C
ATOM 10 O3' C B2491 76.811 -42.203 -11.344 1.00 42.07 O
ATOM 11 C2' C B2491 75.366 -43.992 -12.050 1.00 38.32 C
ATOM 12 O2' C B2491 76.044 -43.849 -13.288 1.00 30.61 O
ATOM 13 C1' C B2491 75.266 -45.454 -11.604 1.00 41.45 C
ATOM 14 N1 C B2491 74.158 -45.642 -10.638 1.00 43.47 N
ATOM 15 C2 C B2491 72.823 -45.585 -11.076 1.00 39.34 C
ATOM 16 O2 C B2491 72.593 -45.483 -12.299 1.00 38.47 O
ATOM 17 N3 C B2491 71.824 -45.652 -10.146 1.00 36.86 N
ATOM 18 C4 C B2491 72.130 -45.779 -8.843 1.00 34.49 C
ATOM 19 N4 C B2491 71.142 -45.788 -7.941 1.00 28.74 N
ATOM 20 C5 C B2491 73.466 -45.894 -8.394 1.00 41.15 C
ATOM 21 C6 C B2491 74.437 -45.828 -9.312 1.00 43.66 C
ATOM 22 P A B2492 75.966 -40.844 -11.588 1.00 46.35 P
ATOM 23 OP1 A B2492 76.774 -39.861 -12.380 1.00 38.54 O
ATOM 24 OP2 A B2492 75.412 -40.447 -10.275 1.00 40.37 O
ATOM 25 O5' A B2492 74.714 -41.282 -12.461 1.00 48.89 O
TER
Atoms:
OP1: (66.192,-41.265,1.055)
OP2: (68.702,-40.661,0.829)
C3': (67.738,-43.545,-3.278)
C1': (69.045,-42.080,-4.569)
C5': (66.491,-41.704,-2.041)
O6: (74.880,-42.520,-3.460)
O4': (68.148,-41.332,-3.762)
C8: (70.707,-42.158,-2.657)
C2: (72.944,-41.990,-6.394)
C6: (73.877,-42.306,-4.149)
C5: (72.537,-42.208,-3.730)
C4: (71.557,-42.047,-4.677)
P: (67.346,-40.793,0.224)
C4': (67.070,-42.194,-3.327)
C2': (68.564,-43.529,-4.549)
O2': (67.773,-43.794,-5.689)
N1: (73.995,-42.165,-5.527)
N2: (73.249,-41.861,-7.698)
N3: (71.684,-41.939,-6.013)
N7: (71.990,-42.267,-2.460)
N9: (70.377,-42.065,-3.983)
O5': (67.458,-41.766,-1.021)
O3': (66.800,-44.582,-3.277)
OP2: (68.702,-40.661,0.829)
C3': (67.738,-43.545,-3.278)
C1': (69.045,-42.080,-4.569)
C5': (66.491,-41.704,-2.041)
O6: (74.880,-42.520,-3.460)
O4': (68.148,-41.332,-3.762)
C8: (70.707,-42.158,-2.657)
C2: (72.944,-41.990,-6.394)
C6: (73.877,-42.306,-4.149)
C5: (72.537,-42.208,-3.730)
C4: (71.557,-42.047,-4.677)
P: (67.346,-40.793,0.224)
C4': (67.070,-42.194,-3.327)
C2': (68.564,-43.529,-4.549)
O2': (67.773,-43.794,-5.689)
N1: (73.995,-42.165,-5.527)
N2: (73.249,-41.861,-7.698)
N3: (71.684,-41.939,-6.013)
N7: (71.990,-42.267,-2.460)
N9: (70.377,-42.065,-3.983)
O5': (67.458,-41.766,-1.021)
O3': (66.800,-44.582,-3.277)
C2: (72.823,-45.585,-11.076)
OP1: (78.207,-41.377,-7.107)
OP2: (75.977,-42.500,-7.679)
C4: (72.130,-45.779,-8.843)
O5': (78.042,-43.498,-8.462)
C3': (76.137,-43.378,-10.895)
C1': (75.266,-45.454,-11.604)
O4': (76.474,-45.738,-10.917)
C5': (77.342,-44.629,-8.976)
P: (77.403,-42.617,-7.297)
O2: (72.593,-45.483,-12.299)
C4': (77.100,-44.497,-10.473)
C2': (75.366,-43.992,-12.050)
O2': (76.044,-43.849,-13.288)
N1: (74.158,-45.642,-10.638)
N3: (71.824,-45.652,-10.146)
N4: (71.142,-45.788,-7.941)
C6: (74.437,-45.828,-9.312)
C5: (73.466,-45.894,-8.394)
O3': (76.811,-42.203,-11.344)
OP1: (78.207,-41.377,-7.107)
OP2: (75.977,-42.500,-7.679)
C4: (72.130,-45.779,-8.843)
O5': (78.042,-43.498,-8.462)
C3': (76.137,-43.378,-10.895)
C1': (75.266,-45.454,-11.604)
O4': (76.474,-45.738,-10.917)
C5': (77.342,-44.629,-8.976)
P: (77.403,-42.617,-7.297)
O2: (72.593,-45.483,-12.299)
C4': (77.100,-44.497,-10.473)
C2': (75.366,-43.992,-12.050)
O2': (76.044,-43.849,-13.288)
N1: (74.158,-45.642,-10.638)
N3: (71.824,-45.652,-10.146)
N4: (71.142,-45.788,-7.941)
C6: (74.437,-45.828,-9.312)
C5: (73.466,-45.894,-8.394)
O3': (76.811,-42.203,-11.344)
Image (generated by PyMOL):