Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A231:A419
Extra
PDB:
ATOM 1 O3' A A 230 -80.537 -62.635 88.460 1.00 3.73 O
ATOM 2 P G A 231 -79.226 -62.869 89.322 1.00 0.27 P
ATOM 3 OP1 G A 231 -78.680 -64.183 88.920 1.00 0.27 O
ATOM 4 OP2 G A 231 -79.568 -62.654 90.736 1.00 0.27 O
ATOM 5 O5' G A 231 -78.288 -61.685 88.826 1.00 0.27 O
ATOM 6 C5' G A 231 -77.952 -61.531 87.450 1.00 0.27 C
ATOM 7 C4' G A 231 -77.517 -60.126 87.157 1.00 0.27 C
ATOM 8 O4' G A 231 -78.504 -59.227 87.734 1.00 0.27 O
ATOM 9 C3' G A 231 -76.158 -59.715 87.756 1.00 0.27 C
ATOM 10 O3' G A 231 -75.479 -58.794 86.866 1.00 0.27 O
ATOM 11 C2' G A 231 -76.563 -58.992 89.046 1.00 0.27 C
ATOM 12 O2' G A 231 -75.634 -58.033 89.505 1.00 0.27 O
ATOM 13 C1' G A 231 -77.875 -58.332 88.631 1.00 0.27 C
ATOM 14 N9 G A 231 -78.787 -58.062 89.742 1.00 0.23 N
ATOM 15 C8 G A 231 -79.265 -58.923 90.689 1.00 0.23 C
ATOM 16 N7 G A 231 -80.050 -58.350 91.565 1.00 0.23 N
ATOM 17 C5 G A 231 -80.074 -57.039 91.149 1.00 0.23 C
ATOM 18 C6 G A 231 -80.763 -55.937 91.664 1.00 0.23 C
ATOM 19 O6 G A 231 -81.511 -55.850 92.645 1.00 0.23 O
ATOM 20 N1 G A 231 -80.533 -54.809 90.921 1.00 0.23 N
ATOM 21 C2 G A 231 -79.742 -54.724 89.840 1.00 0.23 C
ATOM 22 N2 G A 231 -79.672 -53.515 89.290 1.00 0.23 N
ATOM 23 N3 G A 231 -79.096 -55.742 89.334 1.00 0.23 N
ATOM 24 C4 G A 231 -79.312 -56.852 90.038 1.00 0.23 C
ATOM 25 P A A 232 -74.563 -59.349 85.645 1.00 0.55 P
ATOM 26 OP1 A A 232 -75.469 -59.550 84.466 1.00 0.55 O
ATOM 27 OP2 A A 232 -73.797 -60.515 86.189 1.00 0.55 O
ATOM 28 O5' A A 232 -73.565 -58.151 85.341 1.00 0.55 O
TER
ATOM 1 O3' U B 418 -83.371 -51.291 90.352 1.00 0.01 O
ATOM 2 P C B 419 -82.090 -51.034 91.269 1.00 0.01 P
ATOM 3 OP1 C B 419 -81.251 -52.222 91.136 1.00 0.01 O
ATOM 4 OP2 C B 419 -82.571 -50.649 92.618 1.00 0.01 O
ATOM 5 O5' C B 419 -81.376 -49.808 90.567 1.00 0.01 O
ATOM 6 C5' C B 419 -80.158 -50.011 89.896 1.00 0.01 C
ATOM 7 C4' C B 419 -79.958 -49.006 88.821 1.00 0.01 C
ATOM 8 O4' C B 419 -81.205 -48.343 88.532 1.00 0.01 O
ATOM 9 C3' C B 419 -79.017 -47.886 89.165 1.00 0.01 C
ATOM 10 O3' C B 419 -77.680 -48.267 89.022 1.00 0.01 O
ATOM 11 C2' C B 419 -79.439 -46.802 88.211 1.00 0.01 C
ATOM 12 O2' C B 419 -78.919 -47.056 86.920 1.00 0.01 O
ATOM 13 C1' C B 419 -80.953 -47.006 88.180 1.00 0.01 C
ATOM 14 N1 C B 419 -81.645 -46.128 89.143 1.00 0.01 N
ATOM 15 C2 C B 419 -81.879 -44.796 88.797 1.00 0.01 C
ATOM 16 O2 C B 419 -81.501 -44.406 87.708 1.00 0.01 O
ATOM 17 N3 C B 419 -82.508 -43.950 89.624 1.00 0.01 N
ATOM 18 C4 C B 419 -82.921 -44.393 90.796 1.00 0.01 C
ATOM 19 N4 C B 419 -83.537 -43.534 91.601 1.00 0.01 N
ATOM 20 C5 C B 419 -82.716 -45.748 91.190 1.00 0.01 C
ATOM 21 C6 C B 419 -82.081 -46.583 90.345 1.00 0.01 C
ATOM 22 P C B 420 -76.608 -47.866 90.134 1.00 7.31 P
ATOM 23 OP1 C B 420 -75.444 -48.765 89.958 1.00 7.31 O
ATOM 24 OP2 C B 420 -77.296 -47.845 91.446 1.00 7.31 O
ATOM 25 O5' C B 420 -76.231 -46.407 89.694 1.00 7.31 O
TER
ATOM 2 P G A 231 -79.226 -62.869 89.322 1.00 0.27 P
ATOM 3 OP1 G A 231 -78.680 -64.183 88.920 1.00 0.27 O
ATOM 4 OP2 G A 231 -79.568 -62.654 90.736 1.00 0.27 O
ATOM 5 O5' G A 231 -78.288 -61.685 88.826 1.00 0.27 O
ATOM 6 C5' G A 231 -77.952 -61.531 87.450 1.00 0.27 C
ATOM 7 C4' G A 231 -77.517 -60.126 87.157 1.00 0.27 C
ATOM 8 O4' G A 231 -78.504 -59.227 87.734 1.00 0.27 O
ATOM 9 C3' G A 231 -76.158 -59.715 87.756 1.00 0.27 C
ATOM 10 O3' G A 231 -75.479 -58.794 86.866 1.00 0.27 O
ATOM 11 C2' G A 231 -76.563 -58.992 89.046 1.00 0.27 C
ATOM 12 O2' G A 231 -75.634 -58.033 89.505 1.00 0.27 O
ATOM 13 C1' G A 231 -77.875 -58.332 88.631 1.00 0.27 C
ATOM 14 N9 G A 231 -78.787 -58.062 89.742 1.00 0.23 N
ATOM 15 C8 G A 231 -79.265 -58.923 90.689 1.00 0.23 C
ATOM 16 N7 G A 231 -80.050 -58.350 91.565 1.00 0.23 N
ATOM 17 C5 G A 231 -80.074 -57.039 91.149 1.00 0.23 C
ATOM 18 C6 G A 231 -80.763 -55.937 91.664 1.00 0.23 C
ATOM 19 O6 G A 231 -81.511 -55.850 92.645 1.00 0.23 O
ATOM 20 N1 G A 231 -80.533 -54.809 90.921 1.00 0.23 N
ATOM 21 C2 G A 231 -79.742 -54.724 89.840 1.00 0.23 C
ATOM 22 N2 G A 231 -79.672 -53.515 89.290 1.00 0.23 N
ATOM 23 N3 G A 231 -79.096 -55.742 89.334 1.00 0.23 N
ATOM 24 C4 G A 231 -79.312 -56.852 90.038 1.00 0.23 C
ATOM 25 P A A 232 -74.563 -59.349 85.645 1.00 0.55 P
ATOM 26 OP1 A A 232 -75.469 -59.550 84.466 1.00 0.55 O
ATOM 27 OP2 A A 232 -73.797 -60.515 86.189 1.00 0.55 O
ATOM 28 O5' A A 232 -73.565 -58.151 85.341 1.00 0.55 O
TER
ATOM 1 O3' U B 418 -83.371 -51.291 90.352 1.00 0.01 O
ATOM 2 P C B 419 -82.090 -51.034 91.269 1.00 0.01 P
ATOM 3 OP1 C B 419 -81.251 -52.222 91.136 1.00 0.01 O
ATOM 4 OP2 C B 419 -82.571 -50.649 92.618 1.00 0.01 O
ATOM 5 O5' C B 419 -81.376 -49.808 90.567 1.00 0.01 O
ATOM 6 C5' C B 419 -80.158 -50.011 89.896 1.00 0.01 C
ATOM 7 C4' C B 419 -79.958 -49.006 88.821 1.00 0.01 C
ATOM 8 O4' C B 419 -81.205 -48.343 88.532 1.00 0.01 O
ATOM 9 C3' C B 419 -79.017 -47.886 89.165 1.00 0.01 C
ATOM 10 O3' C B 419 -77.680 -48.267 89.022 1.00 0.01 O
ATOM 11 C2' C B 419 -79.439 -46.802 88.211 1.00 0.01 C
ATOM 12 O2' C B 419 -78.919 -47.056 86.920 1.00 0.01 O
ATOM 13 C1' C B 419 -80.953 -47.006 88.180 1.00 0.01 C
ATOM 14 N1 C B 419 -81.645 -46.128 89.143 1.00 0.01 N
ATOM 15 C2 C B 419 -81.879 -44.796 88.797 1.00 0.01 C
ATOM 16 O2 C B 419 -81.501 -44.406 87.708 1.00 0.01 O
ATOM 17 N3 C B 419 -82.508 -43.950 89.624 1.00 0.01 N
ATOM 18 C4 C B 419 -82.921 -44.393 90.796 1.00 0.01 C
ATOM 19 N4 C B 419 -83.537 -43.534 91.601 1.00 0.01 N
ATOM 20 C5 C B 419 -82.716 -45.748 91.190 1.00 0.01 C
ATOM 21 C6 C B 419 -82.081 -46.583 90.345 1.00 0.01 C
ATOM 22 P C B 420 -76.608 -47.866 90.134 1.00 7.31 P
ATOM 23 OP1 C B 420 -75.444 -48.765 89.958 1.00 7.31 O
ATOM 24 OP2 C B 420 -77.296 -47.845 91.446 1.00 7.31 O
ATOM 25 O5' C B 420 -76.231 -46.407 89.694 1.00 7.31 O
TER
Atoms:
OP1: (-78.680,-64.183,88.920)
OP2: (-79.568,-62.654,90.736)
C3': (-76.158,-59.715,87.756)
C1': (-77.875,-58.332,88.631)
C5': (-77.952,-61.531,87.450)
O6: (-81.511,-55.850,92.645)
O4': (-78.504,-59.227,87.734)
C8: (-79.265,-58.923,90.689)
C2: (-79.742,-54.724,89.840)
C6: (-80.763,-55.937,91.664)
C5: (-80.074,-57.039,91.149)
C4: (-79.312,-56.852,90.038)
P: (-79.226,-62.869,89.322)
C4': (-77.517,-60.126,87.157)
C2': (-76.563,-58.992,89.046)
O2': (-75.634,-58.033,89.505)
N1: (-80.533,-54.809,90.921)
N2: (-79.672,-53.515,89.290)
N3: (-79.096,-55.742,89.334)
N7: (-80.050,-58.350,91.565)
N9: (-78.787,-58.062,89.742)
O5': (-78.288,-61.685,88.826)
O3': (-75.479,-58.794,86.866)
OP2: (-79.568,-62.654,90.736)
C3': (-76.158,-59.715,87.756)
C1': (-77.875,-58.332,88.631)
C5': (-77.952,-61.531,87.450)
O6: (-81.511,-55.850,92.645)
O4': (-78.504,-59.227,87.734)
C8: (-79.265,-58.923,90.689)
C2: (-79.742,-54.724,89.840)
C6: (-80.763,-55.937,91.664)
C5: (-80.074,-57.039,91.149)
C4: (-79.312,-56.852,90.038)
P: (-79.226,-62.869,89.322)
C4': (-77.517,-60.126,87.157)
C2': (-76.563,-58.992,89.046)
O2': (-75.634,-58.033,89.505)
N1: (-80.533,-54.809,90.921)
N2: (-79.672,-53.515,89.290)
N3: (-79.096,-55.742,89.334)
N7: (-80.050,-58.350,91.565)
N9: (-78.787,-58.062,89.742)
O5': (-78.288,-61.685,88.826)
O3': (-75.479,-58.794,86.866)
C2: (-81.879,-44.796,88.797)
OP1: (-81.251,-52.222,91.136)
OP2: (-82.571,-50.649,92.618)
C4: (-82.921,-44.393,90.796)
O5': (-81.376,-49.808,90.567)
C3': (-79.017,-47.886,89.165)
C1': (-80.953,-47.006,88.180)
O4': (-81.205,-48.343,88.532)
C5': (-80.158,-50.011,89.896)
P: (-82.090,-51.034,91.269)
O2: (-81.501,-44.406,87.708)
C4': (-79.958,-49.006,88.821)
C2': (-79.439,-46.802,88.211)
O2': (-78.919,-47.056,86.920)
N1: (-81.645,-46.128,89.143)
N3: (-82.508,-43.950,89.624)
N4: (-83.537,-43.534,91.601)
C6: (-82.081,-46.583,90.345)
C5: (-82.716,-45.748,91.190)
O3': (-77.680,-48.267,89.022)
OP1: (-81.251,-52.222,91.136)
OP2: (-82.571,-50.649,92.618)
C4: (-82.921,-44.393,90.796)
O5': (-81.376,-49.808,90.567)
C3': (-79.017,-47.886,89.165)
C1': (-80.953,-47.006,88.180)
O4': (-81.205,-48.343,88.532)
C5': (-80.158,-50.011,89.896)
P: (-82.090,-51.034,91.269)
O2: (-81.501,-44.406,87.708)
C4': (-79.958,-49.006,88.821)
C2': (-79.439,-46.802,88.211)
O2': (-78.919,-47.056,86.920)
N1: (-81.645,-46.128,89.143)
N3: (-82.508,-43.950,89.624)
N4: (-83.537,-43.534,91.601)
C6: (-82.081,-46.583,90.345)
C5: (-82.716,-45.748,91.190)
O3': (-77.680,-48.267,89.022)
Image (generated by PyMOL):