Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:2213:2249
Extra
PDB:
ATOM 1 O3' A A 212 -57.450 97.399 104.155 1.00 91.41 O
ATOM 2 P G A 213 -58.136 96.021 104.588 1.00 90.10 P
ATOM 3 OP1 G A 213 -59.269 96.362 105.489 1.00 91.12 O
ATOM 4 OP2 G A 213 -57.056 95.153 105.103 1.00 89.14 O
ATOM 5 O5' G A 213 -58.685 95.435 103.207 1.00 89.58 O
ATOM 6 C5' G A 213 -59.830 95.979 102.568 1.00 90.36 C
ATOM 7 C4' G A 213 -60.051 95.352 101.211 1.00 89.71 C
ATOM 8 O4' G A 213 -58.850 95.505 100.412 1.00 89.07 O
ATOM 9 C3' G A 213 -60.315 93.850 101.202 1.00 88.77 C
ATOM 10 O3' G A 213 -61.675 93.505 101.453 1.00 89.26 O
ATOM 11 C2' G A 213 -59.832 93.431 99.823 1.00 87.95 C
ATOM 12 O2' G A 213 -60.804 93.723 98.839 1.00 88.44 O
ATOM 13 C1' G A 213 -58.642 94.360 99.618 1.00 87.99 C
ATOM 14 N9 G A 213 -57.384 93.703 100.022 1.00 87.03 N
ATOM 15 C8 G A 213 -56.606 93.741 101.165 1.00 86.96 C
ATOM 16 N7 G A 213 -55.585 92.923 101.123 1.00 85.94 N
ATOM 17 C5 G A 213 -55.712 92.309 99.888 1.00 85.30 C
ATOM 18 C6 G A 213 -54.929 91.335 99.247 1.00 84.18 C
ATOM 19 O6 G A 213 -53.906 90.797 99.680 1.00 83.49 O
ATOM 20 N1 G A 213 -55.438 91.002 97.992 1.00 83.94 N
ATOM 21 C2 G A 213 -56.566 91.543 97.438 1.00 84.69 C
ATOM 22 N2 G A 213 -56.943 91.132 96.238 1.00 84.39 N
ATOM 23 N3 G A 213 -57.306 92.436 98.017 1.00 85.73 N
ATOM 24 C4 G A 213 -56.815 92.764 99.221 1.00 85.96 C
ATOM 25 P A A 214 -62.018 92.251 102.398 1.00109.57 P
ATOM 26 OP1 A A 214 -61.470 91.040 101.743 1.00108.32 O
ATOM 27 OP2 A A 214 -63.463 92.297 102.690 1.00110.41 O
ATOM 28 O5' A A 214 -61.178 92.594 103.704 1.00109.70 O
TER
ATOM 1 O3' U B 248 -52.672 87.446 96.681 1.00 79.85 O
ATOM 2 P C B 249 -53.595 88.249 95.628 1.00 83.04 P
ATOM 3 OP1 C B 249 -52.723 89.271 94.947 1.00 83.23 O
ATOM 4 OP2 C B 249 -54.791 88.714 96.363 1.00 83.95 O
ATOM 5 O5' C B 249 -54.002 87.120 94.573 1.00 82.34 O
ATOM 6 C5' C B 249 -54.972 86.128 94.885 1.00 82.18 C
ATOM 7 C4' C B 249 -56.102 86.108 93.884 1.00 82.52 C
ATOM 8 O4' C B 249 -57.331 85.786 94.575 1.00 82.96 O
ATOM 9 C3' C B 249 -56.378 87.427 93.156 1.00 83.37 C
ATOM 10 O3' C B 249 -55.642 87.543 91.947 1.00 82.98 O
ATOM 11 C2' C B 249 -57.883 87.406 92.935 1.00 84.01 C
ATOM 12 O2' C B 249 -58.218 86.686 91.763 1.00 83.60 O
ATOM 13 C1' C B 249 -58.377 86.619 94.142 1.00 83.90 C
ATOM 14 N1 C B 249 -58.749 87.496 95.261 1.00 84.77 N
ATOM 15 C2 C B 249 -59.780 88.417 95.137 1.00 85.84 C
ATOM 16 O2 C B 249 -60.375 88.477 94.050 1.00 86.02 O
ATOM 17 N3 C B 249 -60.084 89.216 96.192 1.00 86.65 N
ATOM 18 C4 C B 249 -59.410 89.100 97.330 1.00 86.44 C
ATOM 19 N4 C B 249 -59.719 89.883 98.359 1.00 87.28 N
ATOM 20 C5 C B 249 -58.361 88.165 97.480 1.00 85.37 C
ATOM 21 C6 C B 249 -58.059 87.395 96.431 1.00 84.57 C
ATOM 22 P A B 250 -55.131 88.973 91.409 1.00 85.82 P
ATOM 23 OP1 A B 250 -54.243 88.706 90.267 1.00 85.17 O
ATOM 24 OP2 A B 250 -54.583 89.717 92.569 1.00 86.19 O
ATOM 25 O5' A B 250 -56.469 89.654 90.889 1.00 86.81 O
TER
ATOM 2 P G A 213 -58.136 96.021 104.588 1.00 90.10 P
ATOM 3 OP1 G A 213 -59.269 96.362 105.489 1.00 91.12 O
ATOM 4 OP2 G A 213 -57.056 95.153 105.103 1.00 89.14 O
ATOM 5 O5' G A 213 -58.685 95.435 103.207 1.00 89.58 O
ATOM 6 C5' G A 213 -59.830 95.979 102.568 1.00 90.36 C
ATOM 7 C4' G A 213 -60.051 95.352 101.211 1.00 89.71 C
ATOM 8 O4' G A 213 -58.850 95.505 100.412 1.00 89.07 O
ATOM 9 C3' G A 213 -60.315 93.850 101.202 1.00 88.77 C
ATOM 10 O3' G A 213 -61.675 93.505 101.453 1.00 89.26 O
ATOM 11 C2' G A 213 -59.832 93.431 99.823 1.00 87.95 C
ATOM 12 O2' G A 213 -60.804 93.723 98.839 1.00 88.44 O
ATOM 13 C1' G A 213 -58.642 94.360 99.618 1.00 87.99 C
ATOM 14 N9 G A 213 -57.384 93.703 100.022 1.00 87.03 N
ATOM 15 C8 G A 213 -56.606 93.741 101.165 1.00 86.96 C
ATOM 16 N7 G A 213 -55.585 92.923 101.123 1.00 85.94 N
ATOM 17 C5 G A 213 -55.712 92.309 99.888 1.00 85.30 C
ATOM 18 C6 G A 213 -54.929 91.335 99.247 1.00 84.18 C
ATOM 19 O6 G A 213 -53.906 90.797 99.680 1.00 83.49 O
ATOM 20 N1 G A 213 -55.438 91.002 97.992 1.00 83.94 N
ATOM 21 C2 G A 213 -56.566 91.543 97.438 1.00 84.69 C
ATOM 22 N2 G A 213 -56.943 91.132 96.238 1.00 84.39 N
ATOM 23 N3 G A 213 -57.306 92.436 98.017 1.00 85.73 N
ATOM 24 C4 G A 213 -56.815 92.764 99.221 1.00 85.96 C
ATOM 25 P A A 214 -62.018 92.251 102.398 1.00109.57 P
ATOM 26 OP1 A A 214 -61.470 91.040 101.743 1.00108.32 O
ATOM 27 OP2 A A 214 -63.463 92.297 102.690 1.00110.41 O
ATOM 28 O5' A A 214 -61.178 92.594 103.704 1.00109.70 O
TER
ATOM 1 O3' U B 248 -52.672 87.446 96.681 1.00 79.85 O
ATOM 2 P C B 249 -53.595 88.249 95.628 1.00 83.04 P
ATOM 3 OP1 C B 249 -52.723 89.271 94.947 1.00 83.23 O
ATOM 4 OP2 C B 249 -54.791 88.714 96.363 1.00 83.95 O
ATOM 5 O5' C B 249 -54.002 87.120 94.573 1.00 82.34 O
ATOM 6 C5' C B 249 -54.972 86.128 94.885 1.00 82.18 C
ATOM 7 C4' C B 249 -56.102 86.108 93.884 1.00 82.52 C
ATOM 8 O4' C B 249 -57.331 85.786 94.575 1.00 82.96 O
ATOM 9 C3' C B 249 -56.378 87.427 93.156 1.00 83.37 C
ATOM 10 O3' C B 249 -55.642 87.543 91.947 1.00 82.98 O
ATOM 11 C2' C B 249 -57.883 87.406 92.935 1.00 84.01 C
ATOM 12 O2' C B 249 -58.218 86.686 91.763 1.00 83.60 O
ATOM 13 C1' C B 249 -58.377 86.619 94.142 1.00 83.90 C
ATOM 14 N1 C B 249 -58.749 87.496 95.261 1.00 84.77 N
ATOM 15 C2 C B 249 -59.780 88.417 95.137 1.00 85.84 C
ATOM 16 O2 C B 249 -60.375 88.477 94.050 1.00 86.02 O
ATOM 17 N3 C B 249 -60.084 89.216 96.192 1.00 86.65 N
ATOM 18 C4 C B 249 -59.410 89.100 97.330 1.00 86.44 C
ATOM 19 N4 C B 249 -59.719 89.883 98.359 1.00 87.28 N
ATOM 20 C5 C B 249 -58.361 88.165 97.480 1.00 85.37 C
ATOM 21 C6 C B 249 -58.059 87.395 96.431 1.00 84.57 C
ATOM 22 P A B 250 -55.131 88.973 91.409 1.00 85.82 P
ATOM 23 OP1 A B 250 -54.243 88.706 90.267 1.00 85.17 O
ATOM 24 OP2 A B 250 -54.583 89.717 92.569 1.00 86.19 O
ATOM 25 O5' A B 250 -56.469 89.654 90.889 1.00 86.81 O
TER
Atoms:
OP1: (-59.269,96.362,105.489)
OP2: (-57.056,95.153,105.103)
C3': (-60.315,93.850,101.202)
C1': (-58.642,94.360,99.618)
C5': (-59.830,95.979,102.568)
O6: (-53.906,90.797,99.680)
O4': (-58.850,95.505,100.412)
C8: (-56.606,93.741,101.165)
C2: (-56.566,91.543,97.438)
C6: (-54.929,91.335,99.247)
C5: (-55.712,92.309,99.888)
C4: (-56.815,92.764,99.221)
P: (-58.136,96.021,104.588)
C4': (-60.051,95.352,101.211)
C2': (-59.832,93.431,99.823)
O2': (-60.804,93.723,98.839)
N1: (-55.438,91.002,97.992)
N2: (-56.943,91.132,96.238)
N3: (-57.306,92.436,98.017)
N7: (-55.585,92.923,101.123)
N9: (-57.384,93.703,100.022)
O5': (-58.685,95.435,103.207)
O3': (-61.675,93.505,101.453)
OP2: (-57.056,95.153,105.103)
C3': (-60.315,93.850,101.202)
C1': (-58.642,94.360,99.618)
C5': (-59.830,95.979,102.568)
O6: (-53.906,90.797,99.680)
O4': (-58.850,95.505,100.412)
C8: (-56.606,93.741,101.165)
C2: (-56.566,91.543,97.438)
C6: (-54.929,91.335,99.247)
C5: (-55.712,92.309,99.888)
C4: (-56.815,92.764,99.221)
P: (-58.136,96.021,104.588)
C4': (-60.051,95.352,101.211)
C2': (-59.832,93.431,99.823)
O2': (-60.804,93.723,98.839)
N1: (-55.438,91.002,97.992)
N2: (-56.943,91.132,96.238)
N3: (-57.306,92.436,98.017)
N7: (-55.585,92.923,101.123)
N9: (-57.384,93.703,100.022)
O5': (-58.685,95.435,103.207)
O3': (-61.675,93.505,101.453)
C2: (-59.780,88.417,95.137)
OP1: (-52.723,89.271,94.947)
OP2: (-54.791,88.714,96.363)
C4: (-59.410,89.100,97.330)
O5': (-54.002,87.120,94.573)
C3': (-56.378,87.427,93.156)
C1': (-58.377,86.619,94.142)
O4': (-57.331,85.786,94.575)
C5': (-54.972,86.128,94.885)
P: (-53.595,88.249,95.628)
O2: (-60.375,88.477,94.050)
C4': (-56.102,86.108,93.884)
C2': (-57.883,87.406,92.935)
O2': (-58.218,86.686,91.763)
N1: (-58.749,87.496,95.261)
N3: (-60.084,89.216,96.192)
N4: (-59.719,89.883,98.359)
C6: (-58.059,87.395,96.431)
C5: (-58.361,88.165,97.480)
O3': (-55.642,87.543,91.947)
OP1: (-52.723,89.271,94.947)
OP2: (-54.791,88.714,96.363)
C4: (-59.410,89.100,97.330)
O5': (-54.002,87.120,94.573)
C3': (-56.378,87.427,93.156)
C1': (-58.377,86.619,94.142)
O4': (-57.331,85.786,94.575)
C5': (-54.972,86.128,94.885)
P: (-53.595,88.249,95.628)
O2: (-60.375,88.477,94.050)
C4': (-56.102,86.108,93.884)
C2': (-57.883,87.406,92.935)
O2': (-58.218,86.686,91.763)
N1: (-58.749,87.496,95.261)
N3: (-60.084,89.216,96.192)
N4: (-59.719,89.883,98.359)
C6: (-58.059,87.395,96.431)
C5: (-58.361,88.165,97.480)
O3': (-55.642,87.543,91.947)
Image (generated by PyMOL):