Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5H:573:5312
Extra
PDB:
ATOM 1 O3' G A 72 122.288 -60.157 185.088 1.00 67.08 O
ATOM 2 P G A 73 122.239 -59.212 183.771 1.00 60.32 P
ATOM 3 OP1 G A 73 121.274 -58.123 184.044 1.00 59.93 O
ATOM 4 OP2 G A 73 121.985 -60.092 182.610 1.00 61.14 O
ATOM 5 O5' G A 73 123.696 -58.611 183.684 1.00 59.97 O
ATOM 6 C5' G A 73 123.940 -57.274 184.085 1.00 59.31 C
ATOM 7 C4' G A 73 125.184 -56.724 183.462 1.00 59.24 C
ATOM 8 O4' G A 73 126.212 -57.747 183.497 1.00 59.48 O
ATOM 9 C3' G A 73 125.047 -56.337 182.007 1.00 59.70 C
ATOM 10 O3' G A 73 126.074 -55.399 181.704 1.00 59.40 O
ATOM 11 C2' G A 73 125.364 -57.662 181.327 1.00 60.42 C
ATOM 12 O2' G A 73 125.706 -57.566 179.969 1.00 60.92 O
ATOM 13 C1' G A 73 126.538 -58.133 182.182 1.00 60.12 C
ATOM 14 N9 G A 73 126.729 -59.576 182.194 1.00 60.62 N
ATOM 15 C8 G A 73 125.698 -60.469 182.314 1.00 61.00 C
ATOM 16 N7 G A 73 126.111 -61.700 182.322 1.00 61.41 N
ATOM 17 C5 G A 73 127.491 -61.618 182.211 1.00 61.30 C
ATOM 18 C6 G A 73 128.426 -62.659 182.184 1.00 61.62 C
ATOM 19 O6 G A 73 128.165 -63.868 182.240 1.00 62.08 O
ATOM 20 N1 G A 73 129.710 -62.170 182.078 1.00 61.37 N
ATOM 21 C2 G A 73 130.022 -60.844 181.996 1.00 60.88 C
ATOM 22 N2 G A 73 131.316 -60.525 181.886 1.00 60.71 N
ATOM 23 N3 G A 73 129.153 -59.867 182.026 1.00 60.58 N
ATOM 24 C4 G A 73 127.902 -60.317 182.143 1.00 60.81 C
ATOM 25 P A A 74 125.742 -53.859 181.452 1.00 58.74 P
ATOM 26 OP1 A A 74 126.122 -53.102 182.696 1.00 57.94 O
ATOM 27 OP2 A A 74 124.365 -53.788 180.990 1.00 59.05 O
ATOM 28 O5' A A 74 126.736 -53.480 180.279 1.00 59.01 O
TER
ATOM 1 O3' U B 311 133.693 -63.786 184.045 1.00 63.11 O
ATOM 2 P C B 312 133.517 -63.670 182.463 1.00 64.47 P
ATOM 3 OP1 C B 312 132.085 -63.836 182.184 1.00 64.74 O
ATOM 4 OP2 C B 312 134.472 -64.590 181.827 1.00 65.03 O
ATOM 5 O5' C B 312 133.943 -62.176 182.189 1.00 63.98 O
ATOM 6 C5' C B 312 134.731 -61.844 181.070 1.00 64.27 C
ATOM 7 C4' C B 312 135.707 -60.767 181.418 1.00 63.67 C
ATOM 8 O4' C B 312 136.573 -61.246 182.446 1.00 63.38 O
ATOM 9 C3' C B 312 136.631 -60.338 180.302 1.00 63.93 C
ATOM 10 O3' C B 312 136.051 -59.339 179.493 1.00 63.94 O
ATOM 11 C2' C B 312 137.864 -59.863 181.035 1.00 63.39 C
ATOM 12 O2' C B 312 137.686 -58.531 181.477 1.00 62.73 O
ATOM 13 C1' C B 312 137.869 -60.767 182.249 1.00 63.22 C
ATOM 14 N1 C B 312 138.759 -61.920 182.114 1.00 63.67 N
ATOM 15 C2 C B 312 140.149 -61.792 182.188 1.00 63.54 C
ATOM 16 O2 C B 312 140.647 -60.674 182.274 1.00 63.07 O
ATOM 17 N3 C B 312 140.931 -62.885 182.127 1.00 63.95 N
ATOM 18 C4 C B 312 140.333 -64.071 182.051 1.00 64.46 C
ATOM 19 N4 C B 312 141.095 -65.151 182.006 1.00 64.88 N
ATOM 20 C5 C B 312 138.919 -64.234 182.007 1.00 64.59 C
ATOM 21 C6 C B 312 138.170 -63.138 182.061 1.00 64.18 C
ATOM 22 P U B 313 136.514 -59.174 177.981 1.00 67.77 P
ATOM 23 OP1 U B 313 135.950 -57.880 177.470 1.00 67.55 O
ATOM 24 OP2 U B 313 136.163 -60.447 177.285 1.00 68.56 O
ATOM 25 O5' U B 313 138.089 -59.053 178.125 1.00 67.59 O
TER
ATOM 2 P G A 73 122.239 -59.212 183.771 1.00 60.32 P
ATOM 3 OP1 G A 73 121.274 -58.123 184.044 1.00 59.93 O
ATOM 4 OP2 G A 73 121.985 -60.092 182.610 1.00 61.14 O
ATOM 5 O5' G A 73 123.696 -58.611 183.684 1.00 59.97 O
ATOM 6 C5' G A 73 123.940 -57.274 184.085 1.00 59.31 C
ATOM 7 C4' G A 73 125.184 -56.724 183.462 1.00 59.24 C
ATOM 8 O4' G A 73 126.212 -57.747 183.497 1.00 59.48 O
ATOM 9 C3' G A 73 125.047 -56.337 182.007 1.00 59.70 C
ATOM 10 O3' G A 73 126.074 -55.399 181.704 1.00 59.40 O
ATOM 11 C2' G A 73 125.364 -57.662 181.327 1.00 60.42 C
ATOM 12 O2' G A 73 125.706 -57.566 179.969 1.00 60.92 O
ATOM 13 C1' G A 73 126.538 -58.133 182.182 1.00 60.12 C
ATOM 14 N9 G A 73 126.729 -59.576 182.194 1.00 60.62 N
ATOM 15 C8 G A 73 125.698 -60.469 182.314 1.00 61.00 C
ATOM 16 N7 G A 73 126.111 -61.700 182.322 1.00 61.41 N
ATOM 17 C5 G A 73 127.491 -61.618 182.211 1.00 61.30 C
ATOM 18 C6 G A 73 128.426 -62.659 182.184 1.00 61.62 C
ATOM 19 O6 G A 73 128.165 -63.868 182.240 1.00 62.08 O
ATOM 20 N1 G A 73 129.710 -62.170 182.078 1.00 61.37 N
ATOM 21 C2 G A 73 130.022 -60.844 181.996 1.00 60.88 C
ATOM 22 N2 G A 73 131.316 -60.525 181.886 1.00 60.71 N
ATOM 23 N3 G A 73 129.153 -59.867 182.026 1.00 60.58 N
ATOM 24 C4 G A 73 127.902 -60.317 182.143 1.00 60.81 C
ATOM 25 P A A 74 125.742 -53.859 181.452 1.00 58.74 P
ATOM 26 OP1 A A 74 126.122 -53.102 182.696 1.00 57.94 O
ATOM 27 OP2 A A 74 124.365 -53.788 180.990 1.00 59.05 O
ATOM 28 O5' A A 74 126.736 -53.480 180.279 1.00 59.01 O
TER
ATOM 1 O3' U B 311 133.693 -63.786 184.045 1.00 63.11 O
ATOM 2 P C B 312 133.517 -63.670 182.463 1.00 64.47 P
ATOM 3 OP1 C B 312 132.085 -63.836 182.184 1.00 64.74 O
ATOM 4 OP2 C B 312 134.472 -64.590 181.827 1.00 65.03 O
ATOM 5 O5' C B 312 133.943 -62.176 182.189 1.00 63.98 O
ATOM 6 C5' C B 312 134.731 -61.844 181.070 1.00 64.27 C
ATOM 7 C4' C B 312 135.707 -60.767 181.418 1.00 63.67 C
ATOM 8 O4' C B 312 136.573 -61.246 182.446 1.00 63.38 O
ATOM 9 C3' C B 312 136.631 -60.338 180.302 1.00 63.93 C
ATOM 10 O3' C B 312 136.051 -59.339 179.493 1.00 63.94 O
ATOM 11 C2' C B 312 137.864 -59.863 181.035 1.00 63.39 C
ATOM 12 O2' C B 312 137.686 -58.531 181.477 1.00 62.73 O
ATOM 13 C1' C B 312 137.869 -60.767 182.249 1.00 63.22 C
ATOM 14 N1 C B 312 138.759 -61.920 182.114 1.00 63.67 N
ATOM 15 C2 C B 312 140.149 -61.792 182.188 1.00 63.54 C
ATOM 16 O2 C B 312 140.647 -60.674 182.274 1.00 63.07 O
ATOM 17 N3 C B 312 140.931 -62.885 182.127 1.00 63.95 N
ATOM 18 C4 C B 312 140.333 -64.071 182.051 1.00 64.46 C
ATOM 19 N4 C B 312 141.095 -65.151 182.006 1.00 64.88 N
ATOM 20 C5 C B 312 138.919 -64.234 182.007 1.00 64.59 C
ATOM 21 C6 C B 312 138.170 -63.138 182.061 1.00 64.18 C
ATOM 22 P U B 313 136.514 -59.174 177.981 1.00 67.77 P
ATOM 23 OP1 U B 313 135.950 -57.880 177.470 1.00 67.55 O
ATOM 24 OP2 U B 313 136.163 -60.447 177.285 1.00 68.56 O
ATOM 25 O5' U B 313 138.089 -59.053 178.125 1.00 67.59 O
TER
Atoms:
OP1: (121.274,-58.123,184.044)
OP2: (121.985,-60.092,182.610)
C3': (125.047,-56.337,182.007)
C1': (126.538,-58.133,182.182)
C5': (123.940,-57.274,184.085)
O6: (128.165,-63.868,182.240)
O4': (126.212,-57.747,183.497)
C8: (125.698,-60.469,182.314)
C2: (130.022,-60.844,181.996)
C6: (128.426,-62.659,182.184)
C5: (127.491,-61.618,182.211)
C4: (127.902,-60.317,182.143)
P: (122.239,-59.212,183.771)
C4': (125.184,-56.724,183.462)
C2': (125.364,-57.662,181.327)
O2': (125.706,-57.566,179.969)
N1: (129.710,-62.170,182.078)
N2: (131.316,-60.525,181.886)
N3: (129.153,-59.867,182.026)
N7: (126.111,-61.700,182.322)
N9: (126.729,-59.576,182.194)
O5': (123.696,-58.611,183.684)
O3': (126.074,-55.399,181.704)
OP2: (121.985,-60.092,182.610)
C3': (125.047,-56.337,182.007)
C1': (126.538,-58.133,182.182)
C5': (123.940,-57.274,184.085)
O6: (128.165,-63.868,182.240)
O4': (126.212,-57.747,183.497)
C8: (125.698,-60.469,182.314)
C2: (130.022,-60.844,181.996)
C6: (128.426,-62.659,182.184)
C5: (127.491,-61.618,182.211)
C4: (127.902,-60.317,182.143)
P: (122.239,-59.212,183.771)
C4': (125.184,-56.724,183.462)
C2': (125.364,-57.662,181.327)
O2': (125.706,-57.566,179.969)
N1: (129.710,-62.170,182.078)
N2: (131.316,-60.525,181.886)
N3: (129.153,-59.867,182.026)
N7: (126.111,-61.700,182.322)
N9: (126.729,-59.576,182.194)
O5': (123.696,-58.611,183.684)
O3': (126.074,-55.399,181.704)
C2: (140.149,-61.792,182.188)
OP1: (132.085,-63.836,182.184)
OP2: (134.472,-64.590,181.827)
C4: (140.333,-64.071,182.051)
O5': (133.943,-62.176,182.189)
C3': (136.631,-60.338,180.302)
C1': (137.869,-60.767,182.249)
O4': (136.573,-61.246,182.446)
C5': (134.731,-61.844,181.070)
P: (133.517,-63.670,182.463)
O2: (140.647,-60.674,182.274)
C4': (135.707,-60.767,181.418)
C2': (137.864,-59.863,181.035)
O2': (137.686,-58.531,181.477)
N1: (138.759,-61.920,182.114)
N3: (140.931,-62.885,182.127)
N4: (141.095,-65.151,182.006)
C6: (138.170,-63.138,182.061)
C5: (138.919,-64.234,182.007)
O3': (136.051,-59.339,179.493)
OP1: (132.085,-63.836,182.184)
OP2: (134.472,-64.590,181.827)
C4: (140.333,-64.071,182.051)
O5': (133.943,-62.176,182.189)
C3': (136.631,-60.338,180.302)
C1': (137.869,-60.767,182.249)
O4': (136.573,-61.246,182.446)
C5': (134.731,-61.844,181.070)
P: (133.517,-63.670,182.463)
O2: (140.647,-60.674,182.274)
C4': (135.707,-60.767,181.418)
C2': (137.864,-59.863,181.035)
O2': (137.686,-58.531,181.477)
N1: (138.759,-61.920,182.114)
N3: (140.931,-62.885,182.127)
N4: (141.095,-65.151,182.006)
C6: (138.170,-63.138,182.061)
C5: (138.919,-64.234,182.007)
O3': (136.051,-59.339,179.493)
Image (generated by PyMOL):