ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHZ:A403:A401

Extra

PDB:
ATOM 1 O3' U A 402 93.780 -34.834 -61.911 1.00 74.45 O
ATOM 2 P G A 403 94.988 -34.423 -62.909 1.00 42.96 P
ATOM 3 OP1 G A 403 96.229 -34.761 -62.223 1.00 63.37 O
ATOM 4 OP2 G A 403 94.768 -33.022 -63.304 1.00 63.71 O
ATOM 5 O5' G A 403 94.841 -35.353 -64.164 1.00 62.97 O
ATOM 6 C5' G A 403 95.769 -35.221 -65.227 1.00 55.39 C
ATOM 7 C4' G A 403 95.920 -36.495 -65.983 1.00 48.23 C
ATOM 8 O4' G A 403 94.747 -37.304 -65.778 1.00 66.97 O
ATOM 9 C3' G A 403 96.018 -36.356 -67.481 1.00 48.17 C
ATOM 10 O3' G A 403 97.329 -36.017 -67.908 1.00 52.52 O
ATOM 11 C2' G A 403 95.546 -37.721 -67.962 1.00 52.52 C
ATOM 12 O2' G A 403 96.576 -38.683 -67.803 1.00 68.76 O
ATOM 13 C1' G A 403 94.466 -38.043 -66.938 1.00 63.74 C
ATOM 14 N9 G A 403 93.104 -37.706 -67.399 1.00 57.38 N
ATOM 15 C8 G A 403 92.706 -36.770 -68.306 1.00 64.74 C
ATOM 16 N7 G A 403 91.403 -36.733 -68.473 1.00 63.88 N
ATOM 17 C5 G A 403 90.908 -37.700 -67.616 1.00 55.17 C
ATOM 18 C6 G A 403 89.586 -38.128 -67.357 1.00 54.61 C
ATOM 19 O6 G A 403 88.523 -37.757 -67.836 1.00 66.63 O
ATOM 20 N1 G A 403 89.518 -39.128 -66.432 1.00 48.39 N
ATOM 21 C2 G A 403 90.586 -39.673 -65.826 1.00 49.40 C
ATOM 22 N2 G A 403 90.287 -40.639 -64.958 1.00 48.12 N
ATOM 23 N3 G A 403 91.830 -39.296 -66.042 1.00 58.26 N
ATOM 24 C4 G A 403 91.935 -38.309 -66.953 1.00 58.36 C
ATOM 25 P G A 404 97.697 -34.500 -68.338 1.00 55.52 P
ATOM 26 OP1 G A 404 99.172 -34.423 -68.434 1.00 59.17 O
ATOM 27 OP2 G A 404 97.006 -33.588 -67.396 1.00 41.41 O
ATOM 28 O5' G A 404 97.047 -34.380 -69.791 1.00 60.11 O
TER

ATOM 1 O3' C B 400 87.344 -43.205 -64.996 1.00 35.14 O
ATOM 2 P G B 401 86.874 -41.665 -64.933 1.00 43.14 P
ATOM 3 OP1 G B 401 85.427 -41.636 -64.617 1.00 57.49 O
ATOM 4 OP2 G B 401 87.341 -40.997 -66.162 1.00 56.80 O
ATOM 5 O5' G B 401 87.686 -41.132 -63.689 1.00 46.23 O
ATOM 6 C5' G B 401 87.031 -40.500 -62.599 1.00 47.76 C
ATOM 7 C4' G B 401 87.982 -40.301 -61.442 1.00 54.70 C
ATOM 8 O4' G B 401 87.922 -41.479 -60.569 1.00 57.34 O
ATOM 9 C3' G B 401 89.455 -40.148 -61.837 1.00 43.24 C
ATOM 10 O3' G B 401 90.124 -39.338 -60.868 1.00 39.31 O
ATOM 11 C2' G B 401 89.944 -41.586 -61.714 1.00 50.35 C
ATOM 12 O2' G B 401 91.344 -41.742 -61.610 1.00 51.15 O
ATOM 13 C1' G B 401 89.213 -42.014 -60.440 1.00 45.57 C
ATOM 14 N9 G B 401 89.121 -43.458 -60.253 1.00 39.91 N
ATOM 15 C8 G B 401 88.764 -44.441 -61.142 1.00 47.82 C
ATOM 16 N7 G B 401 88.878 -45.656 -60.669 1.00 39.59 N
ATOM 17 C5 G B 401 89.363 -45.426 -59.394 1.00 40.18 C
ATOM 18 C6 G B 401 89.692 -46.341 -58.403 1.00 44.35 C
ATOM 19 O6 G B 401 89.577 -47.564 -58.527 1.00 53.10 O
ATOM 20 N1 G B 401 90.169 -45.715 -57.244 1.00 46.00 N
ATOM 21 C2 G B 401 90.313 -44.361 -57.067 1.00 49.37 C
ATOM 22 N2 G B 401 90.775 -43.916 -55.890 1.00 39.97 N
ATOM 23 N3 G B 401 90.001 -43.496 -58.009 1.00 54.35 N
ATOM 24 C4 G B 401 89.536 -44.098 -59.125 1.00 43.50 C
ATOM 25 P U B 402 89.902 -37.756 -60.839 1.00 47.57 P
ATOM 26 OP1 U B 402 90.740 -37.208 -59.750 1.00 67.20 O
ATOM 27 OP2 U B 402 88.446 -37.514 -60.805 1.00 71.93 O
ATOM 28 O5' U B 402 90.483 -37.308 -62.242 1.00 67.63 O
TER

Atoms:
OP1: (96.229,-34.761,-62.223)
OP2: (94.768,-33.022,-63.304)
C3': (96.018,-36.356,-67.481)
C1': (94.466,-38.043,-66.938)
C5': (95.769,-35.221,-65.227)
O6: (88.523,-37.757,-67.836)
O4': (94.747,-37.304,-65.778)
C8: (92.706,-36.770,-68.306)
C2: (90.586,-39.673,-65.826)
C6: (89.586,-38.128,-67.357)
C5: (90.908,-37.700,-67.616)
C4: (91.935,-38.309,-66.953)
P: (94.988,-34.423,-62.909)
C4': (95.920,-36.495,-65.983)
C2': (95.546,-37.721,-67.962)
O2': (96.576,-38.683,-67.803)
N1: (89.518,-39.128,-66.432)
N2: (90.287,-40.639,-64.958)
N3: (91.830,-39.296,-66.042)
N7: (91.403,-36.733,-68.473)
N9: (93.104,-37.706,-67.399)
O5': (94.841,-35.353,-64.164)
O3': (97.329,-36.017,-67.908)
OP1: (85.427,-41.636,-64.617)
OP2: (87.341,-40.997,-66.162)
C3': (89.455,-40.148,-61.837)
C1': (89.213,-42.014,-60.440)
C5': (87.031,-40.500,-62.599)
O6: (89.577,-47.564,-58.527)
O4': (87.922,-41.479,-60.569)
C8: (88.764,-44.441,-61.142)
C2: (90.313,-44.361,-57.067)
C6: (89.692,-46.341,-58.403)
C5: (89.363,-45.426,-59.394)
C4: (89.536,-44.098,-59.125)
P: (86.874,-41.665,-64.933)
C4': (87.982,-40.301,-61.442)
C2': (89.944,-41.586,-61.714)
O2': (91.344,-41.742,-61.610)
N1: (90.169,-45.715,-57.244)
N2: (90.775,-43.916,-55.890)
N3: (90.001,-43.496,-58.009)
N7: (88.878,-45.656,-60.669)
N9: (89.121,-43.458,-60.253)
O5': (87.686,-41.132,-63.689)
O3': (90.124,-39.338,-60.868)
Image (generated by PyMOL):
PyMOL image
show in jmol