ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3HHN:C47:C50

Extra

PDB:
ATOM 1 O3' C A 46 -4.883 42.148 37.069 1.00 71.66 O
ATOM 2 P G A 47 -5.618 43.305 37.899 1.00 79.59 P
ATOM 3 OP1 G A 47 -4.578 44.225 38.415 1.00 75.94 O
ATOM 4 OP2 G A 47 -6.575 42.671 38.834 1.00 69.79 O
ATOM 5 O5' G A 47 -6.474 44.050 36.772 1.00 74.36 O
ATOM 6 C5' G A 47 -5.830 44.524 35.596 1.00 74.65 C
ATOM 7 C4' G A 47 -6.836 45.011 34.570 1.00 71.86 C
ATOM 8 O4' G A 47 -7.544 43.900 33.959 1.00 72.40 O
ATOM 9 C3' G A 47 -7.980 45.850 35.110 1.00 73.18 C
ATOM 10 O3' G A 47 -7.547 47.148 35.495 1.00 73.01 O
ATOM 11 C2' G A 47 -8.849 45.862 33.859 1.00 74.54 C
ATOM 12 O2' G A 47 -8.301 46.671 32.836 1.00 68.52 O
ATOM 13 C1' G A 47 -8.784 44.385 33.466 1.00 67.17 C
ATOM 14 N9 G A 47 -9.893 43.613 34.026 1.00 59.85 N
ATOM 15 C8 G A 47 -9.913 42.887 35.194 1.00 65.46 C
ATOM 16 N7 G A 47 -11.061 42.311 35.434 1.00 58.05 N
ATOM 17 C5 G A 47 -11.859 42.684 34.358 1.00 60.45 C
ATOM 18 C6 G A 47 -13.208 42.366 34.065 1.00 60.39 C
ATOM 19 O6 G A 47 -13.994 41.667 34.723 1.00 64.94 O
ATOM 20 N1 G A 47 -13.628 42.950 32.871 1.00 46.31 N
ATOM 21 C2 G A 47 -12.841 43.740 32.066 1.00 51.54 C
ATOM 22 N2 G A 47 -13.414 44.218 30.953 1.00 58.58 N
ATOM 23 N3 G A 47 -11.578 44.044 32.327 1.00 55.25 N
ATOM 24 C4 G A 47 -11.154 43.485 33.486 1.00 60.42 C
ATOM 25 P A A 48 -8.257 47.870 36.736 1.00 81.07 P
ATOM 26 OP1 A A 48 -7.289 48.824 37.321 1.00 87.77 O
ATOM 27 OP2 A A 48 -8.870 46.828 37.589 1.00 76.70 O
ATOM 28 O5' A A 48 -9.428 48.703 36.037 1.00 67.88 O
TER

ATOM 1 O3' A B 49 -17.064 46.254 30.855 1.00 80.55 O
ATOM 2 P G B 50 -17.304 44.764 30.323 1.00 66.22 P
ATOM 3 OP1 G B 50 -18.714 44.407 30.594 1.00 77.10 O
ATOM 4 OP2 G B 50 -16.221 43.913 30.863 1.00 56.70 O
ATOM 5 O5' G B 50 -17.137 44.934 28.738 1.00 76.85 O
ATOM 6 C5' G B 50 -17.247 43.819 27.856 1.00 69.84 C
ATOM 7 C4' G B 50 -15.876 43.348 27.404 1.00 62.20 C
ATOM 8 O4' G B 50 -15.132 42.918 28.573 1.00 52.69 O
ATOM 9 C3' G B 50 -15.876 42.146 26.462 1.00 63.68 C
ATOM 10 O3' G B 50 -14.730 42.160 25.618 1.00 52.47 O
ATOM 11 C2' G B 50 -15.787 40.993 27.449 1.00 59.09 C
ATOM 12 O2' G B 50 -15.302 39.804 26.860 1.00 59.93 O
ATOM 13 C1' G B 50 -14.743 41.575 28.387 1.00 58.24 C
ATOM 14 N9 G B 50 -14.672 40.886 29.668 1.00 50.99 N
ATOM 15 C8 G B 50 -15.703 40.314 30.372 1.00 55.97 C
ATOM 16 N7 G B 50 -15.323 39.757 31.488 1.00 49.00 N
ATOM 17 C5 G B 50 -13.952 39.975 31.521 1.00 49.12 C
ATOM 18 C6 G B 50 -12.995 39.598 32.489 1.00 53.49 C
ATOM 19 O6 G B 50 -13.184 38.979 33.545 1.00 58.11 O
ATOM 20 N1 G B 50 -11.714 40.016 32.134 1.00 49.21 N
ATOM 21 C2 G B 50 -11.400 40.708 30.988 1.00 54.84 C
ATOM 22 N2 G B 50 -10.109 41.026 30.814 1.00 62.82 N
ATOM 23 N3 G B 50 -12.287 41.066 30.071 1.00 54.56 N
ATOM 24 C4 G B 50 -13.536 40.666 30.407 1.00 49.97 C
ATOM 25 P G B 51 -14.827 42.786 24.151 1.00 59.05 P
ATOM 26 OP1 G B 51 -13.479 42.740 23.543 1.00 69.38 O
ATOM 27 OP2 G B 51 -15.562 44.066 24.241 1.00 71.95 O
ATOM 28 O5' G B 51 -15.767 41.746 23.389 1.00 62.85 O
TER

Atoms:
OP1: (-4.578,44.225,38.415)
OP2: (-6.575,42.671,38.834)
C3': (-7.980,45.850,35.110)
C1': (-8.784,44.385,33.466)
C5': (-5.830,44.524,35.596)
O6: (-13.994,41.667,34.723)
O4': (-7.544,43.900,33.959)
C8: (-9.913,42.887,35.194)
C2: (-12.841,43.740,32.066)
C6: (-13.208,42.366,34.065)
C5: (-11.859,42.684,34.358)
C4: (-11.154,43.485,33.486)
P: (-5.618,43.305,37.899)
C4': (-6.836,45.011,34.570)
C2': (-8.849,45.862,33.859)
O2': (-8.301,46.671,32.836)
N1: (-13.628,42.950,32.871)
N2: (-13.414,44.218,30.953)
N3: (-11.578,44.044,32.327)
N7: (-11.061,42.311,35.434)
N9: (-9.893,43.613,34.026)
O5': (-6.474,44.050,36.772)
O3': (-7.547,47.148,35.495)
OP1: (-18.714,44.407,30.594)
OP2: (-16.221,43.913,30.863)
C3': (-15.876,42.146,26.462)
C1': (-14.743,41.575,28.387)
C5': (-17.247,43.819,27.856)
O6: (-13.184,38.979,33.545)
O4': (-15.132,42.918,28.573)
C8: (-15.703,40.314,30.372)
C2: (-11.400,40.708,30.988)
C6: (-12.995,39.598,32.489)
C5: (-13.952,39.975,31.521)
C4: (-13.536,40.666,30.407)
P: (-17.304,44.764,30.323)
C4': (-15.876,43.348,27.404)
C2': (-15.787,40.993,27.449)
O2': (-15.302,39.804,26.860)
N1: (-11.714,40.016,32.134)
N2: (-10.109,41.026,30.814)
N3: (-12.287,41.066,30.071)
N7: (-15.323,39.757,31.488)
N9: (-14.672,40.886,29.668)
O5': (-17.137,44.934,28.738)
O3': (-14.730,42.160,25.618)
Image (generated by PyMOL):
PyMOL image
show in jmol