ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQF:A316:A96

Extra

PDB:
ATOM 1 O3' A A 315 112.231 57.310 -9.439 1.00 61.22 O
ATOM 2 P G A 316 113.576 56.520 -9.825 1.00 61.95 P
ATOM 3 OP1 G A 316 113.644 56.574 -11.308 1.00 64.82 O
ATOM 4 OP2 G A 316 113.554 55.198 -9.158 1.00 64.83 O
ATOM 5 O5' G A 316 114.746 57.412 -9.215 1.00 61.12 O
ATOM 6 C5' G A 316 114.941 58.766 -9.673 1.00 62.09 C
ATOM 7 C4' G A 316 115.708 59.568 -8.653 1.00 62.22 C
ATOM 8 O4' G A 316 115.019 59.502 -7.382 1.00 63.14 O
ATOM 9 C3' G A 316 117.116 59.073 -8.388 1.00 62.55 C
ATOM 10 O3' G A 316 117.999 59.748 -9.286 1.00 61.49 O
ATOM 11 C2' G A 316 117.372 59.491 -6.940 1.00 62.98 C
ATOM 12 O2' G A 316 117.926 60.781 -6.849 1.00 63.46 O
ATOM 13 C1' G A 316 115.963 59.491 -6.331 1.00 64.08 C
ATOM 14 N9 G A 316 115.644 58.385 -5.428 1.00 66.94 N
ATOM 15 C8 G A 316 114.985 57.218 -5.740 1.00 66.48 C
ATOM 16 N7 G A 316 114.857 56.416 -4.720 1.00 66.93 N
ATOM 17 C5 G A 316 115.460 57.092 -3.669 1.00 67.76 C
ATOM 18 C6 G A 316 115.629 56.716 -2.311 1.00 69.48 C
ATOM 19 O6 G A 316 115.256 55.674 -1.744 1.00 73.21 O
ATOM 20 N1 G A 316 116.308 57.695 -1.589 1.00 68.54 N
ATOM 21 C2 G A 316 116.756 58.885 -2.100 1.00 68.43 C
ATOM 22 N2 G A 316 117.394 59.703 -1.244 1.00 66.92 N
ATOM 23 N3 G A 316 116.593 59.250 -3.362 1.00 69.08 N
ATOM 24 C4 G A 316 115.946 58.309 -4.085 1.00 67.63 C
ATOM 25 P A A 317 119.010 58.907 -10.208 1.00 61.87 P
ATOM 26 OP1 A A 317 119.620 59.852 -11.174 1.00 62.15 O
ATOM 27 OP2 A A 317 118.281 57.733 -10.725 1.00 63.01 O
ATOM 28 O5' A A 317 120.148 58.432 -9.206 1.00 61.21 O
TER

ATOM 1 O3' G B 95 116.536 57.599 3.234 1.00 59.02 O
ATOM 2 P G B 96 117.436 57.427 1.915 1.00 58.60 P
ATOM 3 OP1 G B 96 117.936 58.781 1.578 1.00 59.09 O
ATOM 4 OP2 G B 96 116.654 56.642 0.929 1.00 58.80 O
ATOM 5 O5' G B 96 118.659 56.546 2.396 1.00 59.05 O
ATOM 6 C5' G B 96 119.322 56.850 3.611 1.00 58.85 C
ATOM 7 C4' G B 96 120.347 55.797 3.948 1.00 61.35 C
ATOM 8 O4' G B 96 119.774 54.453 3.956 1.00 60.42 O
ATOM 9 C3' G B 96 121.530 55.574 3.029 1.00 63.13 C
ATOM 10 O3' G B 96 122.519 56.581 2.986 1.00 63.92 O
ATOM 11 C2' G B 96 122.101 54.299 3.642 1.00 64.04 C
ATOM 12 O2' G B 96 122.770 54.544 4.864 1.00 65.25 O
ATOM 13 C1' G B 96 120.837 53.502 3.944 1.00 63.96 C
ATOM 14 N9 G B 96 120.671 52.506 2.875 1.00 67.31 N
ATOM 15 C8 G B 96 121.569 51.483 2.570 1.00 68.68 C
ATOM 16 N7 G B 96 121.242 50.802 1.504 1.00 65.36 N
ATOM 17 C5 G B 96 120.054 51.388 1.086 1.00 66.84 C
ATOM 18 C6 G B 96 119.258 51.093 -0.018 1.00 67.13 C
ATOM 19 O6 G B 96 119.467 50.259 -0.905 1.00 67.07 O
ATOM 20 N1 G B 96 118.123 51.901 -0.058 1.00 69.74 N
ATOM 21 C2 G B 96 117.817 52.896 0.861 1.00 70.46 C
ATOM 22 N2 G B 96 116.669 53.590 0.652 1.00 72.59 N
ATOM 23 N3 G B 96 118.575 53.195 1.897 1.00 65.11 N
ATOM 24 C4 G B 96 119.668 52.416 1.948 1.00 65.90 C
ATOM 25 P A B 97 123.502 56.647 1.704 1.00 64.89 P
ATOM 26 OP1 A B 97 123.902 55.249 1.384 1.00 65.46 O
ATOM 27 OP2 A B 97 124.557 57.665 1.921 1.00 64.69 O
ATOM 28 O5' A B 97 122.557 57.115 0.529 1.00 64.14 O
TER

Atoms:
OP1: (113.644,56.574,-11.308)
OP2: (113.554,55.198,-9.158)
C3': (117.116,59.073,-8.388)
C1': (115.963,59.491,-6.331)
C5': (114.941,58.766,-9.673)
O6: (115.256,55.674,-1.744)
O4': (115.019,59.502,-7.382)
C8: (114.985,57.218,-5.740)
C2: (116.756,58.885,-2.100)
C6: (115.629,56.716,-2.311)
C5: (115.460,57.092,-3.669)
C4: (115.946,58.309,-4.085)
P: (113.576,56.520,-9.825)
C4': (115.708,59.568,-8.653)
C2': (117.372,59.491,-6.940)
O2': (117.926,60.781,-6.849)
N1: (116.308,57.695,-1.589)
N2: (117.394,59.703,-1.244)
N3: (116.593,59.250,-3.362)
N7: (114.857,56.416,-4.720)
N9: (115.644,58.385,-5.428)
O5': (114.746,57.412,-9.215)
O3': (117.999,59.748,-9.286)
OP1: (117.936,58.781,1.578)
OP2: (116.654,56.642,0.929)
C3': (121.530,55.574,3.029)
C1': (120.837,53.502,3.944)
C5': (119.322,56.850,3.611)
O6: (119.467,50.259,-0.905)
O4': (119.774,54.453,3.956)
C8: (121.569,51.483,2.570)
C2: (117.817,52.896,0.861)
C6: (119.258,51.093,-0.018)
C5: (120.054,51.388,1.086)
C4: (119.668,52.416,1.948)
P: (117.436,57.427,1.915)
C4': (120.347,55.797,3.948)
C2': (122.101,54.299,3.642)
O2': (122.770,54.544,4.864)
N1: (118.123,51.901,-0.058)
N2: (116.669,53.590,0.652)
N3: (118.575,53.195,1.897)
N7: (121.242,50.802,1.504)
N9: (120.671,52.506,2.875)
O5': (118.659,56.546,2.396)
O3': (122.519,56.581,2.986)
Image (generated by PyMOL):
PyMOL image
show in jmol