Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11843:12142
Extra
PDB:
ATOM 1 O3' G A1842 -2.128 42.275 59.682 1.00 47.41 O
ATOM 2 P G A1843 -2.833 41.821 61.058 1.00 49.73 P
ATOM 3 OP1 G A1843 -4.187 41.257 60.709 1.00 49.88 O
ATOM 4 OP2 G A1843 -2.760 42.961 62.008 1.00 50.06 O
ATOM 5 O5' G A1843 -1.883 40.672 61.555 1.00 49.12 O
ATOM 6 C5' G A1843 -1.751 39.464 60.852 1.00 48.73 C
ATOM 7 C4' G A1843 -0.821 38.571 61.588 1.00 48.22 C
ATOM 8 O4' G A1843 0.391 39.323 61.879 1.00 48.18 O
ATOM 9 C3' G A1843 -1.346 38.126 62.926 1.00 48.14 C
ATOM 10 O3' G A1843 -0.743 36.911 63.267 1.00 47.63 O
ATOM 11 C2' G A1843 -0.827 39.205 63.837 1.00 48.34 C
ATOM 12 O2' G A1843 -0.786 38.862 65.191 1.00 48.19 O
ATOM 13 C1' G A1843 0.552 39.435 63.270 1.00 48.13 C
ATOM 14 N9 G A1843 1.096 40.758 63.598 1.00 48.43 N
ATOM 15 C8 G A1843 0.484 41.961 63.426 1.00 48.96 C
ATOM 16 N7 G A1843 1.136 42.997 63.848 1.00 49.16 N
ATOM 17 C5 G A1843 2.246 42.423 64.386 1.00 48.73 C
ATOM 18 C6 G A1843 3.317 43.035 65.028 1.00 48.71 C
ATOM 19 O6 G A1843 3.498 44.231 65.230 1.00 49.08 O
ATOM 20 N1 G A1843 4.288 42.125 65.426 1.00 48.21 N
ATOM 21 C2 G A1843 4.247 40.796 65.242 1.00 47.78 C
ATOM 22 N2 G A1843 5.302 40.145 65.722 1.00 47.37 N
ATOM 23 N3 G A1843 3.231 40.198 64.656 1.00 47.80 N
ATOM 24 C4 G A1843 2.263 41.065 64.247 1.00 48.28 C
ATOM 25 P A A1844 -1.638 35.625 63.555 1.00 42.74 P
ATOM 26 OP1 A A1844 -2.542 35.452 62.378 1.00 42.93 O
ATOM 27 OP2 A A1844 -2.215 35.800 64.901 1.00 42.89 O
ATOM 28 O5' A A1844 -0.558 34.472 63.560 1.00 42.17 O
TER
ATOM 1 O3' U B2141 7.155 42.479 69.138 1.00 55.28 O
ATOM 2 P G B2142 7.764 42.847 67.709 1.00 42.42 P
ATOM 3 OP1 G B2142 8.322 44.193 67.828 1.00 42.78 O
ATOM 4 OP2 G B2142 6.709 42.601 66.676 1.00 42.52 O
ATOM 5 O5' G B2142 8.944 41.784 67.548 1.00 41.86 O
ATOM 6 C5' G B2142 8.676 40.387 67.555 1.00 41.45 C
ATOM 7 C4' G B2142 9.783 39.605 66.916 1.00 41.01 C
ATOM 8 O4' G B2142 9.966 40.090 65.555 1.00 41.14 O
ATOM 9 C3' G B2142 11.127 39.767 67.596 1.00 40.85 C
ATOM 10 O3' G B2142 11.912 38.617 67.342 1.00 40.36 O
ATOM 11 C2' G B2142 11.702 40.982 66.859 1.00 41.14 C
ATOM 12 O2' G B2142 13.092 41.137 66.913 1.00 40.98 O
ATOM 13 C1' G B2142 11.222 40.735 65.441 1.00 41.14 C
ATOM 14 N9 G B2142 11.073 41.971 64.690 1.00 41.57 N
ATOM 15 C8 G B2142 10.743 43.193 65.216 1.00 42.03 C
ATOM 16 N7 G B2142 10.796 44.138 64.313 1.00 42.35 N
ATOM 17 C5 G B2142 11.219 43.493 63.159 1.00 42.08 C
ATOM 18 C6 G B2142 11.466 43.970 61.847 1.00 42.23 C
ATOM 19 O6 G B2142 11.345 45.121 61.424 1.00 42.66 O
ATOM 20 N1 G B2142 11.867 42.978 60.963 1.00 41.86 N
ATOM 21 C2 G B2142 12.036 41.686 61.320 1.00 41.39 C
ATOM 22 N2 G B2142 12.450 40.872 60.346 1.00 41.10 N
ATOM 23 N3 G B2142 11.822 41.211 62.536 1.00 41.24 N
ATOM 24 C4 G B2142 11.405 42.159 63.386 1.00 41.60 C
ATOM 25 P U B2143 11.888 37.408 68.369 1.00 45.29 P
ATOM 26 OP1 U B2143 11.046 37.818 69.480 1.00 45.56 O
ATOM 27 OP2 U B2143 13.268 37.027 68.647 1.00 44.97 O
ATOM 28 O5' U B2143 11.204 36.260 67.540 1.00 45.05 O
TER
ATOM 2 P G A1843 -2.833 41.821 61.058 1.00 49.73 P
ATOM 3 OP1 G A1843 -4.187 41.257 60.709 1.00 49.88 O
ATOM 4 OP2 G A1843 -2.760 42.961 62.008 1.00 50.06 O
ATOM 5 O5' G A1843 -1.883 40.672 61.555 1.00 49.12 O
ATOM 6 C5' G A1843 -1.751 39.464 60.852 1.00 48.73 C
ATOM 7 C4' G A1843 -0.821 38.571 61.588 1.00 48.22 C
ATOM 8 O4' G A1843 0.391 39.323 61.879 1.00 48.18 O
ATOM 9 C3' G A1843 -1.346 38.126 62.926 1.00 48.14 C
ATOM 10 O3' G A1843 -0.743 36.911 63.267 1.00 47.63 O
ATOM 11 C2' G A1843 -0.827 39.205 63.837 1.00 48.34 C
ATOM 12 O2' G A1843 -0.786 38.862 65.191 1.00 48.19 O
ATOM 13 C1' G A1843 0.552 39.435 63.270 1.00 48.13 C
ATOM 14 N9 G A1843 1.096 40.758 63.598 1.00 48.43 N
ATOM 15 C8 G A1843 0.484 41.961 63.426 1.00 48.96 C
ATOM 16 N7 G A1843 1.136 42.997 63.848 1.00 49.16 N
ATOM 17 C5 G A1843 2.246 42.423 64.386 1.00 48.73 C
ATOM 18 C6 G A1843 3.317 43.035 65.028 1.00 48.71 C
ATOM 19 O6 G A1843 3.498 44.231 65.230 1.00 49.08 O
ATOM 20 N1 G A1843 4.288 42.125 65.426 1.00 48.21 N
ATOM 21 C2 G A1843 4.247 40.796 65.242 1.00 47.78 C
ATOM 22 N2 G A1843 5.302 40.145 65.722 1.00 47.37 N
ATOM 23 N3 G A1843 3.231 40.198 64.656 1.00 47.80 N
ATOM 24 C4 G A1843 2.263 41.065 64.247 1.00 48.28 C
ATOM 25 P A A1844 -1.638 35.625 63.555 1.00 42.74 P
ATOM 26 OP1 A A1844 -2.542 35.452 62.378 1.00 42.93 O
ATOM 27 OP2 A A1844 -2.215 35.800 64.901 1.00 42.89 O
ATOM 28 O5' A A1844 -0.558 34.472 63.560 1.00 42.17 O
TER
ATOM 1 O3' U B2141 7.155 42.479 69.138 1.00 55.28 O
ATOM 2 P G B2142 7.764 42.847 67.709 1.00 42.42 P
ATOM 3 OP1 G B2142 8.322 44.193 67.828 1.00 42.78 O
ATOM 4 OP2 G B2142 6.709 42.601 66.676 1.00 42.52 O
ATOM 5 O5' G B2142 8.944 41.784 67.548 1.00 41.86 O
ATOM 6 C5' G B2142 8.676 40.387 67.555 1.00 41.45 C
ATOM 7 C4' G B2142 9.783 39.605 66.916 1.00 41.01 C
ATOM 8 O4' G B2142 9.966 40.090 65.555 1.00 41.14 O
ATOM 9 C3' G B2142 11.127 39.767 67.596 1.00 40.85 C
ATOM 10 O3' G B2142 11.912 38.617 67.342 1.00 40.36 O
ATOM 11 C2' G B2142 11.702 40.982 66.859 1.00 41.14 C
ATOM 12 O2' G B2142 13.092 41.137 66.913 1.00 40.98 O
ATOM 13 C1' G B2142 11.222 40.735 65.441 1.00 41.14 C
ATOM 14 N9 G B2142 11.073 41.971 64.690 1.00 41.57 N
ATOM 15 C8 G B2142 10.743 43.193 65.216 1.00 42.03 C
ATOM 16 N7 G B2142 10.796 44.138 64.313 1.00 42.35 N
ATOM 17 C5 G B2142 11.219 43.493 63.159 1.00 42.08 C
ATOM 18 C6 G B2142 11.466 43.970 61.847 1.00 42.23 C
ATOM 19 O6 G B2142 11.345 45.121 61.424 1.00 42.66 O
ATOM 20 N1 G B2142 11.867 42.978 60.963 1.00 41.86 N
ATOM 21 C2 G B2142 12.036 41.686 61.320 1.00 41.39 C
ATOM 22 N2 G B2142 12.450 40.872 60.346 1.00 41.10 N
ATOM 23 N3 G B2142 11.822 41.211 62.536 1.00 41.24 N
ATOM 24 C4 G B2142 11.405 42.159 63.386 1.00 41.60 C
ATOM 25 P U B2143 11.888 37.408 68.369 1.00 45.29 P
ATOM 26 OP1 U B2143 11.046 37.818 69.480 1.00 45.56 O
ATOM 27 OP2 U B2143 13.268 37.027 68.647 1.00 44.97 O
ATOM 28 O5' U B2143 11.204 36.260 67.540 1.00 45.05 O
TER
Atoms:
OP1: (-4.187,41.257,60.709)
OP2: (-2.760,42.961,62.008)
C3': (-1.346,38.126,62.926)
C1': (0.552,39.435,63.270)
C5': (-1.751,39.464,60.852)
O6: (3.498,44.231,65.230)
O4': (0.391,39.323,61.879)
C8: (0.484,41.961,63.426)
C2: (4.247,40.796,65.242)
C6: (3.317,43.035,65.028)
C5: (2.246,42.423,64.386)
C4: (2.263,41.065,64.247)
P: (-2.833,41.821,61.058)
C4': (-0.821,38.571,61.588)
C2': (-0.827,39.205,63.837)
O2': (-0.786,38.862,65.191)
N1: (4.288,42.125,65.426)
N2: (5.302,40.145,65.722)
N3: (3.231,40.198,64.656)
N7: (1.136,42.997,63.848)
N9: (1.096,40.758,63.598)
O5': (-1.883,40.672,61.555)
O3': (-0.743,36.911,63.267)
OP2: (-2.760,42.961,62.008)
C3': (-1.346,38.126,62.926)
C1': (0.552,39.435,63.270)
C5': (-1.751,39.464,60.852)
O6: (3.498,44.231,65.230)
O4': (0.391,39.323,61.879)
C8: (0.484,41.961,63.426)
C2: (4.247,40.796,65.242)
C6: (3.317,43.035,65.028)
C5: (2.246,42.423,64.386)
C4: (2.263,41.065,64.247)
P: (-2.833,41.821,61.058)
C4': (-0.821,38.571,61.588)
C2': (-0.827,39.205,63.837)
O2': (-0.786,38.862,65.191)
N1: (4.288,42.125,65.426)
N2: (5.302,40.145,65.722)
N3: (3.231,40.198,64.656)
N7: (1.136,42.997,63.848)
N9: (1.096,40.758,63.598)
O5': (-1.883,40.672,61.555)
O3': (-0.743,36.911,63.267)
OP1: (8.322,44.193,67.828)
OP2: (6.709,42.601,66.676)
C3': (11.127,39.767,67.596)
C1': (11.222,40.735,65.441)
C5': (8.676,40.387,67.555)
O6: (11.345,45.121,61.424)
O4': (9.966,40.090,65.555)
C8: (10.743,43.193,65.216)
C2: (12.036,41.686,61.320)
C6: (11.466,43.970,61.847)
C5: (11.219,43.493,63.159)
C4: (11.405,42.159,63.386)
P: (7.764,42.847,67.709)
C4': (9.783,39.605,66.916)
C2': (11.702,40.982,66.859)
O2': (13.092,41.137,66.913)
N1: (11.867,42.978,60.963)
N2: (12.450,40.872,60.346)
N3: (11.822,41.211,62.536)
N7: (10.796,44.138,64.313)
N9: (11.073,41.971,64.690)
O5': (8.944,41.784,67.548)
O3': (11.912,38.617,67.342)
OP2: (6.709,42.601,66.676)
C3': (11.127,39.767,67.596)
C1': (11.222,40.735,65.441)
C5': (8.676,40.387,67.555)
O6: (11.345,45.121,61.424)
O4': (9.966,40.090,65.555)
C8: (10.743,43.193,65.216)
C2: (12.036,41.686,61.320)
C6: (11.466,43.970,61.847)
C5: (11.219,43.493,63.159)
C4: (11.405,42.159,63.386)
P: (7.764,42.847,67.709)
C4': (9.783,39.605,66.916)
C2': (11.702,40.982,66.859)
O2': (13.092,41.137,66.913)
N1: (11.867,42.978,60.963)
N2: (12.450,40.872,60.346)
N3: (11.822,41.211,62.536)
N7: (10.796,44.138,64.313)
N9: (11.073,41.971,64.690)
O5': (8.944,41.784,67.548)
O3': (11.912,38.617,67.342)
Image (generated by PyMOL):