Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0231:0257
Extra
PDB:
ATOM 1 O3' A A 230 92.619 107.592 3.466 1.00 40.89 O
ATOM 2 P A A 231 92.788 107.943 1.905 1.00 42.42 P
ATOM 3 OP1 A A 231 94.225 108.276 1.710 1.00 40.92 O
ATOM 4 OP2 A A 231 91.742 108.927 1.489 1.00 39.99 O
ATOM 5 O5' A A 231 92.454 106.565 1.175 1.00 41.41 O
ATOM 6 C5' A A 231 93.121 105.344 1.543 1.00 43.02 C
ATOM 7 C4' A A 231 92.445 104.163 0.885 1.00 45.53 C
ATOM 8 O4' A A 231 91.099 104.017 1.402 1.00 45.35 O
ATOM 9 C3' A A 231 92.259 104.273 -0.618 1.00 47.40 C
ATOM 10 O3' A A 231 93.454 103.894 -1.298 1.00 49.05 O
ATOM 11 C2' A A 231 91.089 103.327 -0.879 1.00 46.84 C
ATOM 12 O2' A A 231 91.460 101.966 -0.971 1.00 48.63 O
ATOM 13 C1' A A 231 90.244 103.526 0.384 1.00 44.20 C
ATOM 14 N9 A A 231 89.127 104.456 0.231 1.00 41.55 N
ATOM 15 C8 A A 231 89.180 105.816 0.075 1.00 41.40 C
ATOM 16 N7 A A 231 88.004 106.380 -0.050 1.00 41.03 N
ATOM 17 C5 A A 231 87.115 105.321 0.029 1.00 39.93 C
ATOM 18 C6 A A 231 85.712 105.258 -0.043 1.00 39.98 C
ATOM 19 N6 A A 231 84.930 106.322 -0.233 1.00 38.06 N
ATOM 20 N1 A A 231 85.133 104.045 0.084 1.00 40.87 N
ATOM 21 C2 A A 231 85.918 102.975 0.262 1.00 41.45 C
ATOM 22 N3 A A 231 87.247 102.908 0.337 1.00 41.81 N
ATOM 23 C4 A A 231 87.791 104.130 0.212 1.00 40.80 C
ATOM 24 P C A 232 94.226 104.970 -2.203 1.00 51.92 P
ATOM 25 OP1 C A 232 95.503 104.352 -2.657 1.00 49.31 O
ATOM 26 OP2 C A 232 94.257 106.259 -1.476 1.00 52.11 O
ATOM 27 O5' C A 232 93.255 105.171 -3.445 1.00 50.79 O
TER
ATOM 1 O3' U B 256 80.144 108.284 -4.511 1.00 45.51 O
ATOM 2 P G B 257 78.860 107.913 -3.627 1.00 46.60 P
ATOM 3 OP1 G B 257 78.010 106.976 -4.411 1.00 46.84 O
ATOM 4 OP2 G B 257 78.277 109.178 -3.106 1.00 47.07 O
ATOM 5 O5' G B 257 79.474 107.127 -2.392 1.00 46.17 O
ATOM 6 C5' G B 257 80.293 105.966 -2.581 1.00 46.37 C
ATOM 7 C4' G B 257 80.930 105.591 -1.272 1.00 47.93 C
ATOM 8 O4' G B 257 81.904 106.604 -0.906 1.00 48.18 O
ATOM 9 C3' G B 257 79.952 105.570 -0.111 1.00 48.18 C
ATOM 10 O3' G B 257 79.257 104.333 -0.049 1.00 49.52 O
ATOM 11 C2' G B 257 80.856 105.834 1.085 1.00 48.31 C
ATOM 12 O2' G B 257 81.562 104.676 1.490 1.00 49.28 O
ATOM 13 C1' G B 257 81.839 106.850 0.491 1.00 46.46 C
ATOM 14 N9 G B 257 81.468 108.252 0.680 1.00 42.81 N
ATOM 15 C8 G B 257 80.352 108.890 0.192 1.00 41.99 C
ATOM 16 N7 G B 257 80.307 110.156 0.504 1.00 41.07 N
ATOM 17 C5 G B 257 81.457 110.368 1.249 1.00 39.60 C
ATOM 18 C6 G B 257 81.949 111.548 1.857 1.00 39.22 C
ATOM 19 O6 G B 257 81.458 112.683 1.851 1.00 37.92 O
ATOM 20 N1 G B 257 83.149 111.317 2.518 1.00 39.10 N
ATOM 21 C2 G B 257 83.797 110.108 2.578 1.00 39.27 C
ATOM 22 N2 G B 257 84.948 110.085 3.258 1.00 40.76 N
ATOM 23 N3 G B 257 83.350 109.002 2.013 1.00 39.14 N
ATOM 24 C4 G B 257 82.183 109.202 1.371 1.00 40.34 C
ATOM 25 P U B 258 77.760 104.290 0.524 1.00 50.06 P
ATOM 26 OP1 U B 258 77.098 103.084 -0.029 1.00 50.79 O
ATOM 27 OP2 U B 258 77.136 105.621 0.326 1.00 49.14 O
ATOM 28 O5' U B 258 77.979 104.067 2.083 1.00 51.34 O
TER
ATOM 2 P A A 231 92.788 107.943 1.905 1.00 42.42 P
ATOM 3 OP1 A A 231 94.225 108.276 1.710 1.00 40.92 O
ATOM 4 OP2 A A 231 91.742 108.927 1.489 1.00 39.99 O
ATOM 5 O5' A A 231 92.454 106.565 1.175 1.00 41.41 O
ATOM 6 C5' A A 231 93.121 105.344 1.543 1.00 43.02 C
ATOM 7 C4' A A 231 92.445 104.163 0.885 1.00 45.53 C
ATOM 8 O4' A A 231 91.099 104.017 1.402 1.00 45.35 O
ATOM 9 C3' A A 231 92.259 104.273 -0.618 1.00 47.40 C
ATOM 10 O3' A A 231 93.454 103.894 -1.298 1.00 49.05 O
ATOM 11 C2' A A 231 91.089 103.327 -0.879 1.00 46.84 C
ATOM 12 O2' A A 231 91.460 101.966 -0.971 1.00 48.63 O
ATOM 13 C1' A A 231 90.244 103.526 0.384 1.00 44.20 C
ATOM 14 N9 A A 231 89.127 104.456 0.231 1.00 41.55 N
ATOM 15 C8 A A 231 89.180 105.816 0.075 1.00 41.40 C
ATOM 16 N7 A A 231 88.004 106.380 -0.050 1.00 41.03 N
ATOM 17 C5 A A 231 87.115 105.321 0.029 1.00 39.93 C
ATOM 18 C6 A A 231 85.712 105.258 -0.043 1.00 39.98 C
ATOM 19 N6 A A 231 84.930 106.322 -0.233 1.00 38.06 N
ATOM 20 N1 A A 231 85.133 104.045 0.084 1.00 40.87 N
ATOM 21 C2 A A 231 85.918 102.975 0.262 1.00 41.45 C
ATOM 22 N3 A A 231 87.247 102.908 0.337 1.00 41.81 N
ATOM 23 C4 A A 231 87.791 104.130 0.212 1.00 40.80 C
ATOM 24 P C A 232 94.226 104.970 -2.203 1.00 51.92 P
ATOM 25 OP1 C A 232 95.503 104.352 -2.657 1.00 49.31 O
ATOM 26 OP2 C A 232 94.257 106.259 -1.476 1.00 52.11 O
ATOM 27 O5' C A 232 93.255 105.171 -3.445 1.00 50.79 O
TER
ATOM 1 O3' U B 256 80.144 108.284 -4.511 1.00 45.51 O
ATOM 2 P G B 257 78.860 107.913 -3.627 1.00 46.60 P
ATOM 3 OP1 G B 257 78.010 106.976 -4.411 1.00 46.84 O
ATOM 4 OP2 G B 257 78.277 109.178 -3.106 1.00 47.07 O
ATOM 5 O5' G B 257 79.474 107.127 -2.392 1.00 46.17 O
ATOM 6 C5' G B 257 80.293 105.966 -2.581 1.00 46.37 C
ATOM 7 C4' G B 257 80.930 105.591 -1.272 1.00 47.93 C
ATOM 8 O4' G B 257 81.904 106.604 -0.906 1.00 48.18 O
ATOM 9 C3' G B 257 79.952 105.570 -0.111 1.00 48.18 C
ATOM 10 O3' G B 257 79.257 104.333 -0.049 1.00 49.52 O
ATOM 11 C2' G B 257 80.856 105.834 1.085 1.00 48.31 C
ATOM 12 O2' G B 257 81.562 104.676 1.490 1.00 49.28 O
ATOM 13 C1' G B 257 81.839 106.850 0.491 1.00 46.46 C
ATOM 14 N9 G B 257 81.468 108.252 0.680 1.00 42.81 N
ATOM 15 C8 G B 257 80.352 108.890 0.192 1.00 41.99 C
ATOM 16 N7 G B 257 80.307 110.156 0.504 1.00 41.07 N
ATOM 17 C5 G B 257 81.457 110.368 1.249 1.00 39.60 C
ATOM 18 C6 G B 257 81.949 111.548 1.857 1.00 39.22 C
ATOM 19 O6 G B 257 81.458 112.683 1.851 1.00 37.92 O
ATOM 20 N1 G B 257 83.149 111.317 2.518 1.00 39.10 N
ATOM 21 C2 G B 257 83.797 110.108 2.578 1.00 39.27 C
ATOM 22 N2 G B 257 84.948 110.085 3.258 1.00 40.76 N
ATOM 23 N3 G B 257 83.350 109.002 2.013 1.00 39.14 N
ATOM 24 C4 G B 257 82.183 109.202 1.371 1.00 40.34 C
ATOM 25 P U B 258 77.760 104.290 0.524 1.00 50.06 P
ATOM 26 OP1 U B 258 77.098 103.084 -0.029 1.00 50.79 O
ATOM 27 OP2 U B 258 77.136 105.621 0.326 1.00 49.14 O
ATOM 28 O5' U B 258 77.979 104.067 2.083 1.00 51.34 O
TER
Atoms:
OP1: (94.225,108.276,1.710)
OP2: (91.742,108.927,1.489)
C3': (92.259,104.273,-0.618)
C1': (90.244,103.526,0.384)
C5': (93.121,105.344,1.543)
O4': (91.099,104.017,1.402)
C8: (89.180,105.816,0.075)
O2': (91.460,101.966,-0.971)
C6: (85.712,105.258,-0.043)
C5: (87.115,105.321,0.029)
C4: (87.791,104.130,0.212)
P: (92.788,107.943,1.905)
C4': (92.445,104.163,0.885)
C2': (91.089,103.327,-0.879)
C2: (85.918,102.975,0.262)
N1: (85.133,104.045,0.084)
N3: (87.247,102.908,0.337)
N6: (84.930,106.322,-0.233)
N7: (88.004,106.380,-0.050)
N9: (89.127,104.456,0.231)
O5': (92.454,106.565,1.175)
O3': (93.454,103.894,-1.298)
OP2: (91.742,108.927,1.489)
C3': (92.259,104.273,-0.618)
C1': (90.244,103.526,0.384)
C5': (93.121,105.344,1.543)
O4': (91.099,104.017,1.402)
C8: (89.180,105.816,0.075)
O2': (91.460,101.966,-0.971)
C6: (85.712,105.258,-0.043)
C5: (87.115,105.321,0.029)
C4: (87.791,104.130,0.212)
P: (92.788,107.943,1.905)
C4': (92.445,104.163,0.885)
C2': (91.089,103.327,-0.879)
C2: (85.918,102.975,0.262)
N1: (85.133,104.045,0.084)
N3: (87.247,102.908,0.337)
N6: (84.930,106.322,-0.233)
N7: (88.004,106.380,-0.050)
N9: (89.127,104.456,0.231)
O5': (92.454,106.565,1.175)
O3': (93.454,103.894,-1.298)
OP1: (78.010,106.976,-4.411)
OP2: (78.277,109.178,-3.106)
C3': (79.952,105.570,-0.111)
C1': (81.839,106.850,0.491)
C5': (80.293,105.966,-2.581)
O6: (81.458,112.683,1.851)
O4': (81.904,106.604,-0.906)
C8: (80.352,108.890,0.192)
C2: (83.797,110.108,2.578)
C6: (81.949,111.548,1.857)
C5: (81.457,110.368,1.249)
C4: (82.183,109.202,1.371)
P: (78.860,107.913,-3.627)
C4': (80.930,105.591,-1.272)
C2': (80.856,105.834,1.085)
O2': (81.562,104.676,1.490)
N1: (83.149,111.317,2.518)
N2: (84.948,110.085,3.258)
N3: (83.350,109.002,2.013)
N7: (80.307,110.156,0.504)
N9: (81.468,108.252,0.680)
O5': (79.474,107.127,-2.392)
O3': (79.257,104.333,-0.049)
OP2: (78.277,109.178,-3.106)
C3': (79.952,105.570,-0.111)
C1': (81.839,106.850,0.491)
C5': (80.293,105.966,-2.581)
O6: (81.458,112.683,1.851)
O4': (81.904,106.604,-0.906)
C8: (80.352,108.890,0.192)
C2: (83.797,110.108,2.578)
C6: (81.949,111.548,1.857)
C5: (81.457,110.368,1.249)
C4: (82.183,109.202,1.371)
P: (78.860,107.913,-3.627)
C4': (80.930,105.591,-1.272)
C2': (80.856,105.834,1.085)
O2': (81.562,104.676,1.490)
N1: (83.149,111.317,2.518)
N2: (84.948,110.085,3.258)
N3: (83.350,109.002,2.013)
N7: (80.307,110.156,0.504)
N9: (81.468,108.252,0.680)
O5': (79.474,107.127,-2.392)
O3': (79.257,104.333,-0.049)
Image (generated by PyMOL):