Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0709:0925
Extra
PDB:
ATOM 1 O3' A A 708 28.428 66.237 51.026 1.00 52.33 O
ATOM 2 P G A 709 29.825 66.223 51.811 1.00 52.74 P
ATOM 3 OP1 G A 709 30.901 66.652 50.883 1.00 51.76 O
ATOM 4 OP2 G A 709 29.937 64.915 52.502 1.00 52.09 O
ATOM 5 O5' G A 709 29.641 67.381 52.892 1.00 53.19 O
ATOM 6 C5' G A 709 29.602 68.765 52.484 1.00 51.88 C
ATOM 7 C4' G A 709 29.341 69.673 53.668 1.00 51.23 C
ATOM 8 O4' G A 709 28.019 69.407 54.199 1.00 51.87 O
ATOM 9 C3' G A 709 30.243 69.526 54.884 1.00 50.76 C
ATOM 10 O3' G A 709 31.492 70.176 54.751 1.00 50.57 O
ATOM 11 C2' G A 709 29.399 70.173 55.966 1.00 51.60 C
ATOM 12 O2' G A 709 29.411 71.586 55.915 1.00 51.72 O
ATOM 13 C1' G A 709 28.017 69.629 55.603 1.00 52.45 C
ATOM 14 N9 G A 709 27.854 68.345 56.273 1.00 53.25 N
ATOM 15 C8 G A 709 27.924 67.087 55.718 1.00 54.04 C
ATOM 16 N7 G A 709 27.861 66.135 56.606 1.00 54.60 N
ATOM 17 C5 G A 709 27.717 66.805 57.815 1.00 53.97 C
ATOM 18 C6 G A 709 27.631 66.308 59.131 1.00 53.29 C
ATOM 19 O6 G A 709 27.683 65.137 59.513 1.00 52.72 O
ATOM 20 N1 G A 709 27.481 67.337 60.056 1.00 53.54 N
ATOM 21 C2 G A 709 27.430 68.675 59.750 1.00 52.78 C
ATOM 22 N2 G A 709 27.262 69.516 60.771 1.00 52.07 N
ATOM 23 N3 G A 709 27.532 69.150 58.529 1.00 52.55 N
ATOM 24 C4 G A 709 27.674 68.167 57.617 1.00 53.33 C
ATOM 25 P G A 710 32.836 69.372 55.092 1.00 51.11 P
ATOM 26 OP1 G A 710 33.963 70.296 54.848 1.00 53.24 O
ATOM 27 OP2 G A 710 32.797 68.063 54.394 1.00 51.02 O
ATOM 28 O5' G A 710 32.742 69.078 56.651 1.00 51.09 O
TER
ATOM 1 O3' C B 924 29.284 68.811 63.927 1.00 45.77 O
ATOM 2 P G B 925 27.774 68.291 63.745 1.00 46.05 P
ATOM 3 OP1 G B 925 27.813 67.209 62.738 1.00 45.06 O
ATOM 4 OP2 G B 925 26.868 69.458 63.544 1.00 44.67 O
ATOM 5 O5' G B 925 27.407 67.655 65.149 1.00 43.20 O
ATOM 6 C5' G B 925 28.396 67.017 65.957 1.00 44.97 C
ATOM 7 C4' G B 925 27.965 67.069 67.391 1.00 47.33 C
ATOM 8 O4' G B 925 27.932 68.470 67.784 1.00 47.31 O
ATOM 9 C3' G B 925 26.557 66.527 67.614 1.00 49.39 C
ATOM 10 O3' G B 925 26.445 65.901 68.886 1.00 53.55 O
ATOM 11 C2' G B 925 25.698 67.784 67.508 1.00 48.86 C
ATOM 12 O2' G B 925 24.452 67.729 68.175 1.00 49.15 O
ATOM 13 C1' G B 925 26.612 68.845 68.115 1.00 47.90 C
ATOM 14 N9 G B 925 26.362 70.175 67.566 1.00 48.30 N
ATOM 15 C8 G B 925 25.955 70.477 66.288 1.00 48.71 C
ATOM 16 N7 G B 925 25.740 71.748 66.104 1.00 49.25 N
ATOM 17 C5 G B 925 26.043 72.327 67.328 1.00 49.91 C
ATOM 18 C6 G B 925 25.999 73.690 67.740 1.00 50.29 C
ATOM 19 O6 G B 925 25.671 74.690 67.080 1.00 52.04 O
ATOM 20 N1 G B 925 26.396 73.833 69.063 1.00 48.66 N
ATOM 21 C2 G B 925 26.795 72.811 69.881 1.00 47.82 C
ATOM 22 N2 G B 925 27.158 73.159 71.116 1.00 48.39 N
ATOM 23 N3 G B 925 26.840 71.543 69.514 1.00 48.35 N
ATOM 24 C4 G B 925 26.450 71.373 68.234 1.00 48.94 C
ATOM 25 P A B 926 25.516 64.595 69.051 1.00 55.46 P
ATOM 26 OP1 A B 926 26.211 63.435 68.441 1.00 53.98 O
ATOM 27 OP2 A B 926 24.152 64.963 68.585 1.00 54.44 O
ATOM 28 O5' A B 926 25.436 64.374 70.630 1.00 56.22 O
TER
ATOM 2 P G A 709 29.825 66.223 51.811 1.00 52.74 P
ATOM 3 OP1 G A 709 30.901 66.652 50.883 1.00 51.76 O
ATOM 4 OP2 G A 709 29.937 64.915 52.502 1.00 52.09 O
ATOM 5 O5' G A 709 29.641 67.381 52.892 1.00 53.19 O
ATOM 6 C5' G A 709 29.602 68.765 52.484 1.00 51.88 C
ATOM 7 C4' G A 709 29.341 69.673 53.668 1.00 51.23 C
ATOM 8 O4' G A 709 28.019 69.407 54.199 1.00 51.87 O
ATOM 9 C3' G A 709 30.243 69.526 54.884 1.00 50.76 C
ATOM 10 O3' G A 709 31.492 70.176 54.751 1.00 50.57 O
ATOM 11 C2' G A 709 29.399 70.173 55.966 1.00 51.60 C
ATOM 12 O2' G A 709 29.411 71.586 55.915 1.00 51.72 O
ATOM 13 C1' G A 709 28.017 69.629 55.603 1.00 52.45 C
ATOM 14 N9 G A 709 27.854 68.345 56.273 1.00 53.25 N
ATOM 15 C8 G A 709 27.924 67.087 55.718 1.00 54.04 C
ATOM 16 N7 G A 709 27.861 66.135 56.606 1.00 54.60 N
ATOM 17 C5 G A 709 27.717 66.805 57.815 1.00 53.97 C
ATOM 18 C6 G A 709 27.631 66.308 59.131 1.00 53.29 C
ATOM 19 O6 G A 709 27.683 65.137 59.513 1.00 52.72 O
ATOM 20 N1 G A 709 27.481 67.337 60.056 1.00 53.54 N
ATOM 21 C2 G A 709 27.430 68.675 59.750 1.00 52.78 C
ATOM 22 N2 G A 709 27.262 69.516 60.771 1.00 52.07 N
ATOM 23 N3 G A 709 27.532 69.150 58.529 1.00 52.55 N
ATOM 24 C4 G A 709 27.674 68.167 57.617 1.00 53.33 C
ATOM 25 P G A 710 32.836 69.372 55.092 1.00 51.11 P
ATOM 26 OP1 G A 710 33.963 70.296 54.848 1.00 53.24 O
ATOM 27 OP2 G A 710 32.797 68.063 54.394 1.00 51.02 O
ATOM 28 O5' G A 710 32.742 69.078 56.651 1.00 51.09 O
TER
ATOM 1 O3' C B 924 29.284 68.811 63.927 1.00 45.77 O
ATOM 2 P G B 925 27.774 68.291 63.745 1.00 46.05 P
ATOM 3 OP1 G B 925 27.813 67.209 62.738 1.00 45.06 O
ATOM 4 OP2 G B 925 26.868 69.458 63.544 1.00 44.67 O
ATOM 5 O5' G B 925 27.407 67.655 65.149 1.00 43.20 O
ATOM 6 C5' G B 925 28.396 67.017 65.957 1.00 44.97 C
ATOM 7 C4' G B 925 27.965 67.069 67.391 1.00 47.33 C
ATOM 8 O4' G B 925 27.932 68.470 67.784 1.00 47.31 O
ATOM 9 C3' G B 925 26.557 66.527 67.614 1.00 49.39 C
ATOM 10 O3' G B 925 26.445 65.901 68.886 1.00 53.55 O
ATOM 11 C2' G B 925 25.698 67.784 67.508 1.00 48.86 C
ATOM 12 O2' G B 925 24.452 67.729 68.175 1.00 49.15 O
ATOM 13 C1' G B 925 26.612 68.845 68.115 1.00 47.90 C
ATOM 14 N9 G B 925 26.362 70.175 67.566 1.00 48.30 N
ATOM 15 C8 G B 925 25.955 70.477 66.288 1.00 48.71 C
ATOM 16 N7 G B 925 25.740 71.748 66.104 1.00 49.25 N
ATOM 17 C5 G B 925 26.043 72.327 67.328 1.00 49.91 C
ATOM 18 C6 G B 925 25.999 73.690 67.740 1.00 50.29 C
ATOM 19 O6 G B 925 25.671 74.690 67.080 1.00 52.04 O
ATOM 20 N1 G B 925 26.396 73.833 69.063 1.00 48.66 N
ATOM 21 C2 G B 925 26.795 72.811 69.881 1.00 47.82 C
ATOM 22 N2 G B 925 27.158 73.159 71.116 1.00 48.39 N
ATOM 23 N3 G B 925 26.840 71.543 69.514 1.00 48.35 N
ATOM 24 C4 G B 925 26.450 71.373 68.234 1.00 48.94 C
ATOM 25 P A B 926 25.516 64.595 69.051 1.00 55.46 P
ATOM 26 OP1 A B 926 26.211 63.435 68.441 1.00 53.98 O
ATOM 27 OP2 A B 926 24.152 64.963 68.585 1.00 54.44 O
ATOM 28 O5' A B 926 25.436 64.374 70.630 1.00 56.22 O
TER
Atoms:
OP1: (30.901,66.652,50.883)
OP2: (29.937,64.915,52.502)
C3': (30.243,69.526,54.884)
C1': (28.017,69.629,55.603)
C5': (29.602,68.765,52.484)
O6: (27.683,65.137,59.513)
O4': (28.019,69.407,54.199)
C8: (27.924,67.087,55.718)
C2: (27.430,68.675,59.750)
C6: (27.631,66.308,59.131)
C5: (27.717,66.805,57.815)
C4: (27.674,68.167,57.617)
P: (29.825,66.223,51.811)
C4': (29.341,69.673,53.668)
C2': (29.399,70.173,55.966)
O2': (29.411,71.586,55.915)
N1: (27.481,67.337,60.056)
N2: (27.262,69.516,60.771)
N3: (27.532,69.150,58.529)
N7: (27.861,66.135,56.606)
N9: (27.854,68.345,56.273)
O5': (29.641,67.381,52.892)
O3': (31.492,70.176,54.751)
OP2: (29.937,64.915,52.502)
C3': (30.243,69.526,54.884)
C1': (28.017,69.629,55.603)
C5': (29.602,68.765,52.484)
O6: (27.683,65.137,59.513)
O4': (28.019,69.407,54.199)
C8: (27.924,67.087,55.718)
C2: (27.430,68.675,59.750)
C6: (27.631,66.308,59.131)
C5: (27.717,66.805,57.815)
C4: (27.674,68.167,57.617)
P: (29.825,66.223,51.811)
C4': (29.341,69.673,53.668)
C2': (29.399,70.173,55.966)
O2': (29.411,71.586,55.915)
N1: (27.481,67.337,60.056)
N2: (27.262,69.516,60.771)
N3: (27.532,69.150,58.529)
N7: (27.861,66.135,56.606)
N9: (27.854,68.345,56.273)
O5': (29.641,67.381,52.892)
O3': (31.492,70.176,54.751)
OP1: (27.813,67.209,62.738)
OP2: (26.868,69.458,63.544)
C3': (26.557,66.527,67.614)
C1': (26.612,68.845,68.115)
C5': (28.396,67.017,65.957)
O6: (25.671,74.690,67.080)
O4': (27.932,68.470,67.784)
C8: (25.955,70.477,66.288)
C2: (26.795,72.811,69.881)
C6: (25.999,73.690,67.740)
C5: (26.043,72.327,67.328)
C4: (26.450,71.373,68.234)
P: (27.774,68.291,63.745)
C4': (27.965,67.069,67.391)
C2': (25.698,67.784,67.508)
O2': (24.452,67.729,68.175)
N1: (26.396,73.833,69.063)
N2: (27.158,73.159,71.116)
N3: (26.840,71.543,69.514)
N7: (25.740,71.748,66.104)
N9: (26.362,70.175,67.566)
O5': (27.407,67.655,65.149)
O3': (26.445,65.901,68.886)
OP2: (26.868,69.458,63.544)
C3': (26.557,66.527,67.614)
C1': (26.612,68.845,68.115)
C5': (28.396,67.017,65.957)
O6: (25.671,74.690,67.080)
O4': (27.932,68.470,67.784)
C8: (25.955,70.477,66.288)
C2: (26.795,72.811,69.881)
C6: (25.999,73.690,67.740)
C5: (26.043,72.327,67.328)
C4: (26.450,71.373,68.234)
P: (27.774,68.291,63.745)
C4': (27.965,67.069,67.391)
C2': (25.698,67.784,67.508)
O2': (24.452,67.729,68.175)
N1: (26.396,73.833,69.063)
N2: (27.158,73.159,71.116)
N3: (26.840,71.543,69.514)
N7: (25.740,71.748,66.104)
N9: (26.362,70.175,67.566)
O5': (27.407,67.655,65.149)
O3': (26.445,65.901,68.886)
Image (generated by PyMOL):