Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:034:0135
Extra
PDB:
ATOM 1 O3' U A 33 64.116 139.487 24.984 1.00 37.44 O
ATOM 2 P G A 34 65.255 139.987 23.976 1.00 37.28 P
ATOM 3 OP1 G A 34 64.740 141.281 23.422 1.00 35.68 O
ATOM 4 OP2 G A 34 65.618 138.873 23.065 1.00 34.66 O
ATOM 5 O5' G A 34 66.525 140.259 24.900 1.00 37.25 O
ATOM 6 C5' G A 34 66.554 141.370 25.808 1.00 35.82 C
ATOM 7 C4' G A 34 67.905 141.471 26.466 1.00 37.21 C
ATOM 8 O4' G A 34 68.093 140.376 27.401 1.00 39.07 O
ATOM 9 C3' G A 34 69.111 141.353 25.556 1.00 37.50 C
ATOM 10 O3' G A 34 69.371 142.555 24.841 1.00 39.36 O
ATOM 11 C2' G A 34 70.206 141.027 26.559 1.00 36.59 C
ATOM 12 O2' G A 34 70.571 142.156 27.317 1.00 36.26 O
ATOM 13 C1' G A 34 69.477 140.053 27.484 1.00 37.26 C
ATOM 14 N9 G A 34 69.662 138.665 27.067 1.00 35.23 N
ATOM 15 C8 G A 34 68.769 137.887 26.370 1.00 35.20 C
ATOM 16 N7 G A 34 69.234 136.703 26.086 1.00 34.31 N
ATOM 17 C5 G A 34 70.507 136.690 26.636 1.00 31.35 C
ATOM 18 C6 G A 34 71.492 135.682 26.620 1.00 30.71 C
ATOM 19 O6 G A 34 71.442 134.566 26.085 1.00 32.44 O
ATOM 20 N1 G A 34 72.638 136.073 27.303 1.00 30.79 N
ATOM 21 C2 G A 34 72.811 137.283 27.918 1.00 32.97 C
ATOM 22 N2 G A 34 73.986 137.457 28.543 1.00 31.56 N
ATOM 23 N3 G A 34 71.899 138.248 27.923 1.00 32.34 N
ATOM 24 C4 G A 34 70.780 137.884 27.266 1.00 32.08 C
ATOM 25 P A A 35 70.060 142.487 23.384 1.00 39.17 P
ATOM 26 OP1 A A 35 69.009 142.801 22.392 1.00 38.80 O
ATOM 27 OP2 A A 35 70.846 141.234 23.238 1.00 38.09 O
ATOM 28 O5' A A 35 71.122 143.673 23.435 1.00 40.18 O
TER
ATOM 1 O3' U B 134 77.429 133.607 26.941 1.00 30.21 O
ATOM 2 P G B 135 76.105 134.047 27.743 1.00 33.48 P
ATOM 3 OP1 G B 135 75.490 132.779 28.232 1.00 36.04 O
ATOM 4 OP2 G B 135 75.265 135.007 26.987 1.00 31.50 O
ATOM 5 O5' G B 135 76.695 134.823 28.999 1.00 34.74 O
ATOM 6 C5' G B 135 77.750 134.245 29.783 1.00 33.67 C
ATOM 7 C4' G B 135 78.283 135.258 30.758 1.00 35.19 C
ATOM 8 O4' G B 135 79.059 136.265 30.047 1.00 38.64 O
ATOM 9 C3' G B 135 77.217 136.018 31.544 1.00 35.36 C
ATOM 10 O3' G B 135 77.709 136.281 32.850 1.00 34.15 O
ATOM 11 C2' G B 135 77.113 137.324 30.768 1.00 35.83 C
ATOM 12 O2' G B 135 76.621 138.396 31.544 1.00 34.46 O
ATOM 13 C1' G B 135 78.575 137.541 30.392 1.00 37.99 C
ATOM 14 N9 G B 135 78.830 138.477 29.302 1.00 41.70 N
ATOM 15 C8 G B 135 79.778 139.469 29.305 1.00 41.65 C
ATOM 16 N7 G B 135 79.736 140.222 28.242 1.00 43.87 N
ATOM 17 C5 G B 135 78.709 139.688 27.479 1.00 43.91 C
ATOM 18 C6 G B 135 78.183 140.106 26.230 1.00 44.04 C
ATOM 19 O6 G B 135 78.512 141.074 25.543 1.00 45.35 O
ATOM 20 N1 G B 135 77.158 139.275 25.803 1.00 43.74 N
ATOM 21 C2 G B 135 76.685 138.191 26.491 1.00 43.19 C
ATOM 22 N2 G B 135 75.695 137.515 25.898 1.00 42.90 N
ATOM 23 N3 G B 135 77.150 137.799 27.671 1.00 43.32 N
ATOM 24 C4 G B 135 78.156 138.590 28.102 1.00 43.11 C
ATOM 25 P A B 136 77.230 135.369 34.072 1.00 33.28 P
ATOM 26 OP1 A B 136 78.205 135.552 35.175 1.00 33.54 O
ATOM 27 OP2 A B 136 76.981 134.001 33.541 1.00 33.07 O
ATOM 28 O5' A B 136 75.839 136.012 34.495 1.00 29.71 O
TER
ATOM 2 P G A 34 65.255 139.987 23.976 1.00 37.28 P
ATOM 3 OP1 G A 34 64.740 141.281 23.422 1.00 35.68 O
ATOM 4 OP2 G A 34 65.618 138.873 23.065 1.00 34.66 O
ATOM 5 O5' G A 34 66.525 140.259 24.900 1.00 37.25 O
ATOM 6 C5' G A 34 66.554 141.370 25.808 1.00 35.82 C
ATOM 7 C4' G A 34 67.905 141.471 26.466 1.00 37.21 C
ATOM 8 O4' G A 34 68.093 140.376 27.401 1.00 39.07 O
ATOM 9 C3' G A 34 69.111 141.353 25.556 1.00 37.50 C
ATOM 10 O3' G A 34 69.371 142.555 24.841 1.00 39.36 O
ATOM 11 C2' G A 34 70.206 141.027 26.559 1.00 36.59 C
ATOM 12 O2' G A 34 70.571 142.156 27.317 1.00 36.26 O
ATOM 13 C1' G A 34 69.477 140.053 27.484 1.00 37.26 C
ATOM 14 N9 G A 34 69.662 138.665 27.067 1.00 35.23 N
ATOM 15 C8 G A 34 68.769 137.887 26.370 1.00 35.20 C
ATOM 16 N7 G A 34 69.234 136.703 26.086 1.00 34.31 N
ATOM 17 C5 G A 34 70.507 136.690 26.636 1.00 31.35 C
ATOM 18 C6 G A 34 71.492 135.682 26.620 1.00 30.71 C
ATOM 19 O6 G A 34 71.442 134.566 26.085 1.00 32.44 O
ATOM 20 N1 G A 34 72.638 136.073 27.303 1.00 30.79 N
ATOM 21 C2 G A 34 72.811 137.283 27.918 1.00 32.97 C
ATOM 22 N2 G A 34 73.986 137.457 28.543 1.00 31.56 N
ATOM 23 N3 G A 34 71.899 138.248 27.923 1.00 32.34 N
ATOM 24 C4 G A 34 70.780 137.884 27.266 1.00 32.08 C
ATOM 25 P A A 35 70.060 142.487 23.384 1.00 39.17 P
ATOM 26 OP1 A A 35 69.009 142.801 22.392 1.00 38.80 O
ATOM 27 OP2 A A 35 70.846 141.234 23.238 1.00 38.09 O
ATOM 28 O5' A A 35 71.122 143.673 23.435 1.00 40.18 O
TER
ATOM 1 O3' U B 134 77.429 133.607 26.941 1.00 30.21 O
ATOM 2 P G B 135 76.105 134.047 27.743 1.00 33.48 P
ATOM 3 OP1 G B 135 75.490 132.779 28.232 1.00 36.04 O
ATOM 4 OP2 G B 135 75.265 135.007 26.987 1.00 31.50 O
ATOM 5 O5' G B 135 76.695 134.823 28.999 1.00 34.74 O
ATOM 6 C5' G B 135 77.750 134.245 29.783 1.00 33.67 C
ATOM 7 C4' G B 135 78.283 135.258 30.758 1.00 35.19 C
ATOM 8 O4' G B 135 79.059 136.265 30.047 1.00 38.64 O
ATOM 9 C3' G B 135 77.217 136.018 31.544 1.00 35.36 C
ATOM 10 O3' G B 135 77.709 136.281 32.850 1.00 34.15 O
ATOM 11 C2' G B 135 77.113 137.324 30.768 1.00 35.83 C
ATOM 12 O2' G B 135 76.621 138.396 31.544 1.00 34.46 O
ATOM 13 C1' G B 135 78.575 137.541 30.392 1.00 37.99 C
ATOM 14 N9 G B 135 78.830 138.477 29.302 1.00 41.70 N
ATOM 15 C8 G B 135 79.778 139.469 29.305 1.00 41.65 C
ATOM 16 N7 G B 135 79.736 140.222 28.242 1.00 43.87 N
ATOM 17 C5 G B 135 78.709 139.688 27.479 1.00 43.91 C
ATOM 18 C6 G B 135 78.183 140.106 26.230 1.00 44.04 C
ATOM 19 O6 G B 135 78.512 141.074 25.543 1.00 45.35 O
ATOM 20 N1 G B 135 77.158 139.275 25.803 1.00 43.74 N
ATOM 21 C2 G B 135 76.685 138.191 26.491 1.00 43.19 C
ATOM 22 N2 G B 135 75.695 137.515 25.898 1.00 42.90 N
ATOM 23 N3 G B 135 77.150 137.799 27.671 1.00 43.32 N
ATOM 24 C4 G B 135 78.156 138.590 28.102 1.00 43.11 C
ATOM 25 P A B 136 77.230 135.369 34.072 1.00 33.28 P
ATOM 26 OP1 A B 136 78.205 135.552 35.175 1.00 33.54 O
ATOM 27 OP2 A B 136 76.981 134.001 33.541 1.00 33.07 O
ATOM 28 O5' A B 136 75.839 136.012 34.495 1.00 29.71 O
TER
Atoms:
OP1: (64.740,141.281,23.422)
OP2: (65.618,138.873,23.065)
C3': (69.111,141.353,25.556)
C1': (69.477,140.053,27.484)
C5': (66.554,141.370,25.808)
O6: (71.442,134.566,26.085)
O4': (68.093,140.376,27.401)
C8: (68.769,137.887,26.370)
C2: (72.811,137.283,27.918)
C6: (71.492,135.682,26.620)
C5: (70.507,136.690,26.636)
C4: (70.780,137.884,27.266)
P: (65.255,139.987,23.976)
C4': (67.905,141.471,26.466)
C2': (70.206,141.027,26.559)
O2': (70.571,142.156,27.317)
N1: (72.638,136.073,27.303)
N2: (73.986,137.457,28.543)
N3: (71.899,138.248,27.923)
N7: (69.234,136.703,26.086)
N9: (69.662,138.665,27.067)
O5': (66.525,140.259,24.900)
O3': (69.371,142.555,24.841)
OP2: (65.618,138.873,23.065)
C3': (69.111,141.353,25.556)
C1': (69.477,140.053,27.484)
C5': (66.554,141.370,25.808)
O6: (71.442,134.566,26.085)
O4': (68.093,140.376,27.401)
C8: (68.769,137.887,26.370)
C2: (72.811,137.283,27.918)
C6: (71.492,135.682,26.620)
C5: (70.507,136.690,26.636)
C4: (70.780,137.884,27.266)
P: (65.255,139.987,23.976)
C4': (67.905,141.471,26.466)
C2': (70.206,141.027,26.559)
O2': (70.571,142.156,27.317)
N1: (72.638,136.073,27.303)
N2: (73.986,137.457,28.543)
N3: (71.899,138.248,27.923)
N7: (69.234,136.703,26.086)
N9: (69.662,138.665,27.067)
O5': (66.525,140.259,24.900)
O3': (69.371,142.555,24.841)
OP1: (75.490,132.779,28.232)
OP2: (75.265,135.007,26.987)
C3': (77.217,136.018,31.544)
C1': (78.575,137.541,30.392)
C5': (77.750,134.245,29.783)
O6: (78.512,141.074,25.543)
O4': (79.059,136.265,30.047)
C8: (79.778,139.469,29.305)
C2: (76.685,138.191,26.491)
C6: (78.183,140.106,26.230)
C5: (78.709,139.688,27.479)
C4: (78.156,138.590,28.102)
P: (76.105,134.047,27.743)
C4': (78.283,135.258,30.758)
C2': (77.113,137.324,30.768)
O2': (76.621,138.396,31.544)
N1: (77.158,139.275,25.803)
N2: (75.695,137.515,25.898)
N3: (77.150,137.799,27.671)
N7: (79.736,140.222,28.242)
N9: (78.830,138.477,29.302)
O5': (76.695,134.823,28.999)
O3': (77.709,136.281,32.850)
OP2: (75.265,135.007,26.987)
C3': (77.217,136.018,31.544)
C1': (78.575,137.541,30.392)
C5': (77.750,134.245,29.783)
O6: (78.512,141.074,25.543)
O4': (79.059,136.265,30.047)
C8: (79.778,139.469,29.305)
C2: (76.685,138.191,26.491)
C6: (78.183,140.106,26.230)
C5: (78.709,139.688,27.479)
C4: (78.156,138.590,28.102)
P: (76.105,134.047,27.743)
C4': (78.283,135.258,30.758)
C2': (77.113,137.324,30.768)
O2': (76.621,138.396,31.544)
N1: (77.158,139.275,25.803)
N2: (75.695,137.515,25.898)
N3: (77.150,137.799,27.671)
N7: (79.736,140.222,28.242)
N9: (78.830,138.477,29.302)
O5': (76.695,134.823,28.999)
O3': (77.709,136.281,32.850)
Image (generated by PyMOL):