Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3SD3:A23:A67
Extra
PDB:
ATOM 1 O3' A A 22 0.695 4.286 26.061 1.00 31.52 O
ATOM 2 P G A 23 1.936 3.447 26.636 1.00 35.27 P
ATOM 3 OP1 G A 23 1.377 2.426 27.559 1.00 39.41 O
ATOM 4 OP2 G A 23 2.915 4.425 27.164 1.00 36.58 O
ATOM 5 O5' G A 23 2.525 2.740 25.336 1.00 32.53 O
ATOM 6 C5' G A 23 1.784 1.744 24.647 1.00 33.05 C
ATOM 7 C4' G A 23 2.407 1.411 23.312 1.00 34.77 C
ATOM 8 O4' G A 23 2.550 2.620 22.518 1.00 33.55 O
ATOM 9 C3' G A 23 3.814 0.831 23.355 1.00 33.40 C
ATOM 10 O3' G A 23 3.834 -0.558 23.637 1.00 34.32 O
ATOM 11 C2' G A 23 4.355 1.177 21.975 1.00 30.29 C
ATOM 12 O2' G A 23 3.842 0.283 20.998 1.00 28.87 O
ATOM 13 C1' G A 23 3.731 2.554 21.746 1.00 31.56 C
ATOM 14 N9 G A 23 4.630 3.640 22.175 1.00 31.13 N
ATOM 15 C8 G A 23 4.571 4.327 23.361 1.00 32.63 C
ATOM 16 N7 G A 23 5.501 5.238 23.473 1.00 33.00 N
ATOM 17 C5 G A 23 6.218 5.139 22.291 1.00 30.61 C
ATOM 18 C6 G A 23 7.344 5.875 21.846 1.00 28.68 C
ATOM 19 O6 G A 23 7.948 6.785 22.429 1.00 26.61 O
ATOM 20 N1 G A 23 7.760 5.457 20.586 1.00 28.36 N
ATOM 21 C2 G A 23 7.169 4.464 19.845 1.00 28.95 C
ATOM 22 N2 G A 23 7.725 4.221 18.649 1.00 28.14 N
ATOM 23 N3 G A 23 6.115 3.767 20.249 1.00 29.01 N
ATOM 24 C4 G A 23 5.696 4.157 21.475 1.00 30.33 C
ATOM 25 P C A 24 5.071 -1.206 24.435 1.00 36.67 P
ATOM 26 OP1 C A 24 4.848 -2.671 24.464 1.00 39.74 O
ATOM 27 OP2 C A 24 5.190 -0.479 25.719 1.00 38.30 O
ATOM 28 O5' C A 24 6.320 -0.866 23.504 1.00 23.12 O
TER
ATOM 1 O3' G B 66 9.613 6.107 17.238 1.00 29.65 O
ATOM 2 P G B 67 10.770 6.471 18.295 1.00 29.82 P
ATOM 3 OP1 G B 67 10.166 6.380 19.647 1.00 28.11 O
ATOM 4 OP2 G B 67 11.369 7.760 17.867 1.00 31.45 O
ATOM 5 O5' G B 67 11.822 5.298 18.091 1.00 35.11 O
ATOM 6 C5' G B 67 11.427 3.940 18.176 1.00 37.90 C
ATOM 7 C4' G B 67 12.315 3.061 17.334 1.00 44.34 C
ATOM 8 O4' G B 67 13.651 3.044 17.878 1.00 49.61 O
ATOM 9 C3' G B 67 11.915 1.598 17.244 1.00 44.20 C
ATOM 10 O3' G B 67 10.923 1.393 16.256 1.00 39.99 O
ATOM 11 C2' G B 67 13.236 0.889 16.935 1.00 51.80 C
ATOM 12 O2' G B 67 13.471 0.855 15.534 1.00 55.98 O
ATOM 13 C1' G B 67 14.275 1.820 17.580 1.00 54.49 C
ATOM 14 N9 G B 67 14.847 1.272 18.821 1.00 61.79 N
ATOM 15 C8 G B 67 14.280 0.445 19.759 1.00 64.83 C
ATOM 16 N7 G B 67 15.097 0.175 20.743 1.00 66.55 N
ATOM 17 C5 G B 67 16.262 0.869 20.436 1.00 68.40 C
ATOM 18 C6 G B 67 17.499 0.964 21.125 1.00 71.37 C
ATOM 19 O6 G B 67 17.823 0.430 22.192 1.00 74.36 O
ATOM 20 N1 G B 67 18.409 1.778 20.454 1.00 69.74 N
ATOM 21 C2 G B 67 18.161 2.421 19.266 1.00 68.63 C
ATOM 22 N2 G B 67 19.161 3.163 18.768 1.00 67.76 N
ATOM 23 N3 G B 67 17.013 2.340 18.614 1.00 67.44 N
ATOM 24 C4 G B 67 16.120 1.553 19.252 1.00 65.90 C
ATOM 25 P U B 68 10.111 0.016 16.163 1.00 33.34 P
ATOM 26 OP1 U B 68 10.632 -0.880 17.223 1.00 27.53 O
ATOM 27 OP2 U B 68 10.182 -0.433 14.750 1.00 37.52 O
ATOM 28 O5' U B 68 8.626 0.464 16.506 1.00 27.06 O
TER
ATOM 2 P G A 23 1.936 3.447 26.636 1.00 35.27 P
ATOM 3 OP1 G A 23 1.377 2.426 27.559 1.00 39.41 O
ATOM 4 OP2 G A 23 2.915 4.425 27.164 1.00 36.58 O
ATOM 5 O5' G A 23 2.525 2.740 25.336 1.00 32.53 O
ATOM 6 C5' G A 23 1.784 1.744 24.647 1.00 33.05 C
ATOM 7 C4' G A 23 2.407 1.411 23.312 1.00 34.77 C
ATOM 8 O4' G A 23 2.550 2.620 22.518 1.00 33.55 O
ATOM 9 C3' G A 23 3.814 0.831 23.355 1.00 33.40 C
ATOM 10 O3' G A 23 3.834 -0.558 23.637 1.00 34.32 O
ATOM 11 C2' G A 23 4.355 1.177 21.975 1.00 30.29 C
ATOM 12 O2' G A 23 3.842 0.283 20.998 1.00 28.87 O
ATOM 13 C1' G A 23 3.731 2.554 21.746 1.00 31.56 C
ATOM 14 N9 G A 23 4.630 3.640 22.175 1.00 31.13 N
ATOM 15 C8 G A 23 4.571 4.327 23.361 1.00 32.63 C
ATOM 16 N7 G A 23 5.501 5.238 23.473 1.00 33.00 N
ATOM 17 C5 G A 23 6.218 5.139 22.291 1.00 30.61 C
ATOM 18 C6 G A 23 7.344 5.875 21.846 1.00 28.68 C
ATOM 19 O6 G A 23 7.948 6.785 22.429 1.00 26.61 O
ATOM 20 N1 G A 23 7.760 5.457 20.586 1.00 28.36 N
ATOM 21 C2 G A 23 7.169 4.464 19.845 1.00 28.95 C
ATOM 22 N2 G A 23 7.725 4.221 18.649 1.00 28.14 N
ATOM 23 N3 G A 23 6.115 3.767 20.249 1.00 29.01 N
ATOM 24 C4 G A 23 5.696 4.157 21.475 1.00 30.33 C
ATOM 25 P C A 24 5.071 -1.206 24.435 1.00 36.67 P
ATOM 26 OP1 C A 24 4.848 -2.671 24.464 1.00 39.74 O
ATOM 27 OP2 C A 24 5.190 -0.479 25.719 1.00 38.30 O
ATOM 28 O5' C A 24 6.320 -0.866 23.504 1.00 23.12 O
TER
ATOM 1 O3' G B 66 9.613 6.107 17.238 1.00 29.65 O
ATOM 2 P G B 67 10.770 6.471 18.295 1.00 29.82 P
ATOM 3 OP1 G B 67 10.166 6.380 19.647 1.00 28.11 O
ATOM 4 OP2 G B 67 11.369 7.760 17.867 1.00 31.45 O
ATOM 5 O5' G B 67 11.822 5.298 18.091 1.00 35.11 O
ATOM 6 C5' G B 67 11.427 3.940 18.176 1.00 37.90 C
ATOM 7 C4' G B 67 12.315 3.061 17.334 1.00 44.34 C
ATOM 8 O4' G B 67 13.651 3.044 17.878 1.00 49.61 O
ATOM 9 C3' G B 67 11.915 1.598 17.244 1.00 44.20 C
ATOM 10 O3' G B 67 10.923 1.393 16.256 1.00 39.99 O
ATOM 11 C2' G B 67 13.236 0.889 16.935 1.00 51.80 C
ATOM 12 O2' G B 67 13.471 0.855 15.534 1.00 55.98 O
ATOM 13 C1' G B 67 14.275 1.820 17.580 1.00 54.49 C
ATOM 14 N9 G B 67 14.847 1.272 18.821 1.00 61.79 N
ATOM 15 C8 G B 67 14.280 0.445 19.759 1.00 64.83 C
ATOM 16 N7 G B 67 15.097 0.175 20.743 1.00 66.55 N
ATOM 17 C5 G B 67 16.262 0.869 20.436 1.00 68.40 C
ATOM 18 C6 G B 67 17.499 0.964 21.125 1.00 71.37 C
ATOM 19 O6 G B 67 17.823 0.430 22.192 1.00 74.36 O
ATOM 20 N1 G B 67 18.409 1.778 20.454 1.00 69.74 N
ATOM 21 C2 G B 67 18.161 2.421 19.266 1.00 68.63 C
ATOM 22 N2 G B 67 19.161 3.163 18.768 1.00 67.76 N
ATOM 23 N3 G B 67 17.013 2.340 18.614 1.00 67.44 N
ATOM 24 C4 G B 67 16.120 1.553 19.252 1.00 65.90 C
ATOM 25 P U B 68 10.111 0.016 16.163 1.00 33.34 P
ATOM 26 OP1 U B 68 10.632 -0.880 17.223 1.00 27.53 O
ATOM 27 OP2 U B 68 10.182 -0.433 14.750 1.00 37.52 O
ATOM 28 O5' U B 68 8.626 0.464 16.506 1.00 27.06 O
TER
Atoms:
OP1: (1.377,2.426,27.559)
OP2: (2.915,4.425,27.164)
C3': (3.814,0.831,23.355)
C1': (3.731,2.554,21.746)
C5': (1.784,1.744,24.647)
O6: (7.948,6.785,22.429)
O4': (2.550,2.620,22.518)
C8: (4.571,4.327,23.361)
C2: (7.169,4.464,19.845)
C6: (7.344,5.875,21.846)
C5: (6.218,5.139,22.291)
C4: (5.696,4.157,21.475)
P: (1.936,3.447,26.636)
C4': (2.407,1.411,23.312)
C2': (4.355,1.177,21.975)
O2': (3.842,0.283,20.998)
N1: (7.760,5.457,20.586)
N2: (7.725,4.221,18.649)
N3: (6.115,3.767,20.249)
N7: (5.501,5.238,23.473)
N9: (4.630,3.640,22.175)
O5': (2.525,2.740,25.336)
O3': (3.834,-0.558,23.637)
OP2: (2.915,4.425,27.164)
C3': (3.814,0.831,23.355)
C1': (3.731,2.554,21.746)
C5': (1.784,1.744,24.647)
O6: (7.948,6.785,22.429)
O4': (2.550,2.620,22.518)
C8: (4.571,4.327,23.361)
C2: (7.169,4.464,19.845)
C6: (7.344,5.875,21.846)
C5: (6.218,5.139,22.291)
C4: (5.696,4.157,21.475)
P: (1.936,3.447,26.636)
C4': (2.407,1.411,23.312)
C2': (4.355,1.177,21.975)
O2': (3.842,0.283,20.998)
N1: (7.760,5.457,20.586)
N2: (7.725,4.221,18.649)
N3: (6.115,3.767,20.249)
N7: (5.501,5.238,23.473)
N9: (4.630,3.640,22.175)
O5': (2.525,2.740,25.336)
O3': (3.834,-0.558,23.637)
OP1: (10.166,6.380,19.647)
OP2: (11.369,7.760,17.867)
C3': (11.915,1.598,17.244)
C1': (14.275,1.820,17.580)
C5': (11.427,3.940,18.176)
O6: (17.823,0.430,22.192)
O4': (13.651,3.044,17.878)
C8: (14.280,0.445,19.759)
C2: (18.161,2.421,19.266)
C6: (17.499,0.964,21.125)
C5: (16.262,0.869,20.436)
C4: (16.120,1.553,19.252)
P: (10.770,6.471,18.295)
C4': (12.315,3.061,17.334)
C2': (13.236,0.889,16.935)
O2': (13.471,0.855,15.534)
N1: (18.409,1.778,20.454)
N2: (19.161,3.163,18.768)
N3: (17.013,2.340,18.614)
N7: (15.097,0.175,20.743)
N9: (14.847,1.272,18.821)
O5': (11.822,5.298,18.091)
O3': (10.923,1.393,16.256)
OP2: (11.369,7.760,17.867)
C3': (11.915,1.598,17.244)
C1': (14.275,1.820,17.580)
C5': (11.427,3.940,18.176)
O6: (17.823,0.430,22.192)
O4': (13.651,3.044,17.878)
C8: (14.280,0.445,19.759)
C2: (18.161,2.421,19.266)
C6: (17.499,0.964,21.125)
C5: (16.262,0.869,20.436)
C4: (16.120,1.553,19.252)
P: (10.770,6.471,18.295)
C4': (12.315,3.061,17.334)
C2': (13.236,0.889,16.935)
O2': (13.471,0.855,15.534)
N1: (18.409,1.778,20.454)
N2: (19.161,3.163,18.768)
N3: (17.013,2.340,18.614)
N7: (15.097,0.175,20.743)
N9: (14.847,1.272,18.821)
O5': (11.822,5.298,18.091)
O3': (10.923,1.393,16.256)
Image (generated by PyMOL):