ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1Q93:C10:C17

Extra

PDB:
ATOM 1 O3' U A 9 7.055 34.593 42.127 1.00 33.05 O
ATOM 2 P A A 10 6.282 34.177 43.478 1.00 33.57 P
ATOM 3 OP1 A A 10 5.407 35.301 43.879 1.00 32.69 O
ATOM 4 OP2 A A 10 7.264 33.636 44.450 1.00 34.03 O
ATOM 5 O5' A A 10 5.343 32.987 42.989 1.00 33.75 O
ATOM 6 C5' A A 10 4.548 33.133 41.815 1.00 32.81 C
ATOM 7 C4' A A 10 3.769 31.871 41.548 1.00 32.28 C
ATOM 8 O4' A A 10 4.594 30.948 40.785 1.00 33.16 O
ATOM 9 C3' A A 10 3.349 31.064 42.768 1.00 32.70 C
ATOM 10 O3' A A 10 2.137 31.554 43.329 1.00 31.85 O
ATOM 11 C2' A A 10 3.149 29.683 42.165 1.00 32.13 C
ATOM 12 O2' A A 10 1.944 29.604 41.438 1.00 32.83 O
ATOM 13 C1' A A 10 4.323 29.615 41.193 1.00 32.43 C
ATOM 14 N9 A A 10 5.531 29.047 41.793 1.00 31.88 N
ATOM 15 C8 A A 10 6.579 29.694 42.401 1.00 30.30 C
ATOM 16 N7 A A 10 7.519 28.886 42.836 1.00 29.32 N
ATOM 17 C5 A A 10 7.056 27.624 42.496 1.00 30.56 C
ATOM 18 C6 A A 10 7.588 26.337 42.681 1.00 30.17 C
ATOM 19 N6 A A 10 8.749 26.096 43.282 1.00 29.92 N
ATOM 20 N1 A A 10 6.873 25.292 42.219 1.00 30.37 N
ATOM 21 C2 A A 10 5.710 25.530 41.617 1.00 29.88 C
ATOM 22 N3 A A 10 5.103 26.688 41.385 1.00 30.12 N
ATOM 23 C4 A A 10 5.835 27.708 41.853 1.00 30.59 C
ATOM 24 P G A 11 2.009 31.700 44.921 1.00 32.72 P
ATOM 25 OP1 G A 11 0.604 32.053 45.225 1.00 35.12 O
ATOM 26 OP2 G A 11 3.111 32.567 45.421 1.00 35.22 O
ATOM 27 O5' G A 11 2.296 30.230 45.463 1.00 32.11 O
TER

ATOM 1 O3' C B 16 15.417 22.090 47.520 1.00 34.72 O
ATOM 2 P G B 17 15.985 22.114 46.026 1.00 33.63 P
ATOM 3 OP1 G B 17 16.450 20.732 45.770 1.00 31.83 O
ATOM 4 OP2 G B 17 16.935 23.254 45.906 1.00 32.77 O
ATOM 5 O5' G B 17 14.700 22.433 45.136 1.00 33.00 O
ATOM 6 C5' G B 17 13.423 21.895 45.469 1.00 32.01 C
ATOM 7 C4' G B 17 12.325 22.656 44.755 1.00 31.75 C
ATOM 8 O4' G B 17 11.866 23.760 45.589 1.00 32.88 O
ATOM 9 C3' G B 17 12.711 23.349 43.459 1.00 32.37 C
ATOM 10 O3' G B 17 12.778 22.459 42.351 1.00 33.52 O
ATOM 11 C2' G B 17 11.589 24.365 43.327 1.00 31.13 C
ATOM 12 O2' G B 17 10.356 23.794 42.955 1.00 30.37 O
ATOM 13 C1' G B 17 11.495 24.858 44.767 1.00 31.02 C
ATOM 14 N9 G B 17 12.420 25.960 45.008 1.00 29.58 N
ATOM 15 C8 G B 17 13.715 25.879 45.458 1.00 31.50 C
ATOM 16 N7 G B 17 14.297 27.047 45.556 1.00 31.17 N
ATOM 17 C5 G B 17 13.326 27.950 45.149 1.00 29.08 C
ATOM 18 C6 G B 17 13.373 29.363 45.048 1.00 31.44 C
ATOM 19 O6 G B 17 14.308 30.123 45.321 1.00 32.93 O
ATOM 20 N1 G B 17 12.168 29.882 44.583 1.00 26.80 N
ATOM 21 C2 G B 17 11.057 29.137 44.271 1.00 28.07 C
ATOM 22 N2 G B 17 9.980 29.821 43.842 1.00 28.51 N
ATOM 23 N3 G B 17 10.999 27.821 44.371 1.00 26.59 N
ATOM 24 C4 G B 17 12.162 27.297 44.810 1.00 29.12 C
ATOM 25 P A B 18 13.674 22.849 41.078 1.00 32.94 P
ATOM 26 OP1 A B 18 13.775 21.656 40.204 1.00 33.87 O
ATOM 27 OP2 A B 18 14.910 23.507 41.567 1.00 33.47 O
ATOM 28 O5' A B 18 12.794 23.947 40.336 1.00 33.70 O
TER

Atoms:
OP1: (5.407,35.301,43.879)
OP2: (7.264,33.636,44.450)
C3': (3.349,31.064,42.768)
C1': (4.323,29.615,41.193)
C5': (4.548,33.133,41.815)
O4': (4.594,30.948,40.785)
C8: (6.579,29.694,42.401)
O2': (1.944,29.604,41.438)
C6: (7.588,26.337,42.681)
C5: (7.056,27.624,42.496)
C4: (5.835,27.708,41.853)
P: (6.282,34.177,43.478)
C4': (3.769,31.871,41.548)
C2': (3.149,29.683,42.165)
C2: (5.710,25.530,41.617)
N1: (6.873,25.292,42.219)
N3: (5.103,26.688,41.385)
N6: (8.749,26.096,43.282)
N7: (7.519,28.886,42.836)
N9: (5.531,29.047,41.793)
O5': (5.343,32.987,42.989)
O3': (2.137,31.554,43.329)
OP1: (16.450,20.732,45.770)
OP2: (16.935,23.254,45.906)
C3': (12.711,23.349,43.459)
C1': (11.495,24.858,44.767)
C5': (13.423,21.895,45.469)
O6: (14.308,30.123,45.321)
O4': (11.866,23.760,45.589)
C8: (13.715,25.879,45.458)
C2: (11.057,29.137,44.271)
C6: (13.373,29.363,45.048)
C5: (13.326,27.950,45.149)
C4: (12.162,27.297,44.810)
P: (15.985,22.114,46.026)
C4': (12.325,22.656,44.755)
C2': (11.589,24.365,43.327)
O2': (10.356,23.794,42.955)
N1: (12.168,29.882,44.583)
N2: (9.980,29.821,43.842)
N3: (10.999,27.821,44.371)
N7: (14.297,27.047,45.556)
N9: (12.420,25.960,45.008)
O5': (14.700,22.433,45.136)
O3': (12.778,22.459,42.351)
Image (generated by PyMOL):
PyMOL image
show in jmol