Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12934:12941
Extra
PDB:
ATOM 1 O3' C A2933 59.159 38.520 2.161 1.00 48.16 O
ATOM 2 P G A2934 58.037 37.561 2.764 1.00 48.83 P
ATOM 3 OP1 G A2934 57.573 38.194 3.985 1.00 48.54 O
ATOM 4 OP2 G A2934 58.605 36.199 2.833 1.00 48.45 O
ATOM 5 O5' G A2934 56.890 37.631 1.688 1.00 49.24 O
ATOM 6 C5' G A2934 55.928 38.661 1.803 1.00 49.47 C
ATOM 7 C4' G A2934 54.938 38.670 0.683 1.00 49.91 C
ATOM 8 O4' G A2934 55.593 38.883 -0.586 1.00 50.45 O
ATOM 9 C3' G A2934 54.119 37.416 0.484 1.00 49.66 C
ATOM 10 O3' G A2934 53.092 37.311 1.460 1.00 49.27 O
ATOM 11 C2' G A2934 53.620 37.647 -0.937 1.00 50.28 C
ATOM 12 O2' G A2934 52.638 38.665 -0.960 1.00 50.58 O
ATOM 13 C1' G A2934 54.873 38.217 -1.590 1.00 50.68 C
ATOM 14 N9 G A2934 55.723 37.164 -2.120 1.00 50.60 N
ATOM 15 C8 G A2934 56.754 36.528 -1.475 1.00 50.18 C
ATOM 16 N7 G A2934 57.300 35.595 -2.220 1.00 50.24 N
ATOM 17 C5 G A2934 56.558 35.640 -3.418 1.00 50.74 C
ATOM 18 C6 G A2934 56.666 34.880 -4.619 1.00 51.05 C
ATOM 19 O6 G A2934 57.459 33.998 -4.931 1.00 50.96 O
ATOM 20 N1 G A2934 55.721 35.254 -5.544 1.00 51.53 N
ATOM 21 C2 G A2934 54.793 36.249 -5.318 1.00 51.70 C
ATOM 22 N2 G A2934 53.971 36.467 -6.347 1.00 52.21 N
ATOM 23 N3 G A2934 54.654 36.966 -4.208 1.00 51.42 N
ATOM 24 C4 G A2934 55.581 36.608 -3.334 1.00 50.95 C
ATOM 25 P A A2935 52.399 35.905 1.869 1.00 51.02 P
ATOM 26 OP1 A A2935 51.280 36.252 2.767 1.00 50.79 O
ATOM 27 OP2 A A2935 53.426 34.980 2.365 1.00 50.58 O
ATOM 28 O5' A A2935 51.812 35.382 0.510 1.00 51.42 O
TER
ATOM 1 O3' G B2940 54.889 32.721 -8.743 1.00 53.06 O
ATOM 2 P G B2941 55.713 33.940 -9.344 1.00 54.68 P
ATOM 3 OP1 G B2941 55.561 35.072 -8.397 1.00 54.53 O
ATOM 4 OP2 G B2941 55.288 34.106 -10.762 1.00 55.36 O
ATOM 5 O5' G B2941 57.190 33.398 -9.279 1.00 54.51 O
ATOM 6 C5' G B2941 57.928 33.515 -8.078 1.00 54.00 C
ATOM 7 C4' G B2941 59.378 33.248 -8.311 1.00 54.05 C
ATOM 8 O4' G B2941 59.516 31.966 -8.968 1.00 54.05 O
ATOM 9 C3' G B2941 60.089 34.198 -9.257 1.00 54.69 C
ATOM 10 O3' G B2941 60.456 35.428 -8.656 1.00 54.73 O
ATOM 11 C2' G B2941 61.269 33.362 -9.700 1.00 54.71 C
ATOM 12 O2' G B2941 62.187 33.260 -8.636 1.00 54.23 O
ATOM 13 C1' G B2941 60.615 31.999 -9.851 1.00 54.46 C
ATOM 14 N9 G B2941 60.132 31.731 -11.219 1.00 55.01 N
ATOM 15 C8 G B2941 58.822 31.680 -11.628 1.00 55.18 C
ATOM 16 N7 G B2941 58.689 31.375 -12.894 1.00 55.71 N
ATOM 17 C5 G B2941 59.990 31.165 -13.324 1.00 55.87 C
ATOM 18 C6 G B2941 60.486 30.798 -14.599 1.00 56.40 C
ATOM 19 O6 G B2941 59.858 30.585 -15.631 1.00 56.85 O
ATOM 20 N1 G B2941 61.856 30.694 -14.618 1.00 56.40 N
ATOM 21 C2 G B2941 62.649 30.921 -13.538 1.00 55.95 C
ATOM 22 N2 G B2941 63.935 30.776 -13.773 1.00 56.06 N
ATOM 23 N3 G B2941 62.235 31.266 -12.342 1.00 55.46 N
ATOM 24 C4 G B2941 60.893 31.368 -12.300 1.00 55.44 C
ATOM 25 P C B2942 60.488 36.756 -9.557 1.00 58.27 P
ATOM 26 OP1 C B2942 60.901 37.868 -8.683 1.00 58.18 O
ATOM 27 OP2 C B2942 59.192 36.842 -10.229 1.00 58.59 O
ATOM 28 O5' C B2942 61.627 36.438 -10.617 1.00 58.68 O
TER
ATOM 2 P G A2934 58.037 37.561 2.764 1.00 48.83 P
ATOM 3 OP1 G A2934 57.573 38.194 3.985 1.00 48.54 O
ATOM 4 OP2 G A2934 58.605 36.199 2.833 1.00 48.45 O
ATOM 5 O5' G A2934 56.890 37.631 1.688 1.00 49.24 O
ATOM 6 C5' G A2934 55.928 38.661 1.803 1.00 49.47 C
ATOM 7 C4' G A2934 54.938 38.670 0.683 1.00 49.91 C
ATOM 8 O4' G A2934 55.593 38.883 -0.586 1.00 50.45 O
ATOM 9 C3' G A2934 54.119 37.416 0.484 1.00 49.66 C
ATOM 10 O3' G A2934 53.092 37.311 1.460 1.00 49.27 O
ATOM 11 C2' G A2934 53.620 37.647 -0.937 1.00 50.28 C
ATOM 12 O2' G A2934 52.638 38.665 -0.960 1.00 50.58 O
ATOM 13 C1' G A2934 54.873 38.217 -1.590 1.00 50.68 C
ATOM 14 N9 G A2934 55.723 37.164 -2.120 1.00 50.60 N
ATOM 15 C8 G A2934 56.754 36.528 -1.475 1.00 50.18 C
ATOM 16 N7 G A2934 57.300 35.595 -2.220 1.00 50.24 N
ATOM 17 C5 G A2934 56.558 35.640 -3.418 1.00 50.74 C
ATOM 18 C6 G A2934 56.666 34.880 -4.619 1.00 51.05 C
ATOM 19 O6 G A2934 57.459 33.998 -4.931 1.00 50.96 O
ATOM 20 N1 G A2934 55.721 35.254 -5.544 1.00 51.53 N
ATOM 21 C2 G A2934 54.793 36.249 -5.318 1.00 51.70 C
ATOM 22 N2 G A2934 53.971 36.467 -6.347 1.00 52.21 N
ATOM 23 N3 G A2934 54.654 36.966 -4.208 1.00 51.42 N
ATOM 24 C4 G A2934 55.581 36.608 -3.334 1.00 50.95 C
ATOM 25 P A A2935 52.399 35.905 1.869 1.00 51.02 P
ATOM 26 OP1 A A2935 51.280 36.252 2.767 1.00 50.79 O
ATOM 27 OP2 A A2935 53.426 34.980 2.365 1.00 50.58 O
ATOM 28 O5' A A2935 51.812 35.382 0.510 1.00 51.42 O
TER
ATOM 1 O3' G B2940 54.889 32.721 -8.743 1.00 53.06 O
ATOM 2 P G B2941 55.713 33.940 -9.344 1.00 54.68 P
ATOM 3 OP1 G B2941 55.561 35.072 -8.397 1.00 54.53 O
ATOM 4 OP2 G B2941 55.288 34.106 -10.762 1.00 55.36 O
ATOM 5 O5' G B2941 57.190 33.398 -9.279 1.00 54.51 O
ATOM 6 C5' G B2941 57.928 33.515 -8.078 1.00 54.00 C
ATOM 7 C4' G B2941 59.378 33.248 -8.311 1.00 54.05 C
ATOM 8 O4' G B2941 59.516 31.966 -8.968 1.00 54.05 O
ATOM 9 C3' G B2941 60.089 34.198 -9.257 1.00 54.69 C
ATOM 10 O3' G B2941 60.456 35.428 -8.656 1.00 54.73 O
ATOM 11 C2' G B2941 61.269 33.362 -9.700 1.00 54.71 C
ATOM 12 O2' G B2941 62.187 33.260 -8.636 1.00 54.23 O
ATOM 13 C1' G B2941 60.615 31.999 -9.851 1.00 54.46 C
ATOM 14 N9 G B2941 60.132 31.731 -11.219 1.00 55.01 N
ATOM 15 C8 G B2941 58.822 31.680 -11.628 1.00 55.18 C
ATOM 16 N7 G B2941 58.689 31.375 -12.894 1.00 55.71 N
ATOM 17 C5 G B2941 59.990 31.165 -13.324 1.00 55.87 C
ATOM 18 C6 G B2941 60.486 30.798 -14.599 1.00 56.40 C
ATOM 19 O6 G B2941 59.858 30.585 -15.631 1.00 56.85 O
ATOM 20 N1 G B2941 61.856 30.694 -14.618 1.00 56.40 N
ATOM 21 C2 G B2941 62.649 30.921 -13.538 1.00 55.95 C
ATOM 22 N2 G B2941 63.935 30.776 -13.773 1.00 56.06 N
ATOM 23 N3 G B2941 62.235 31.266 -12.342 1.00 55.46 N
ATOM 24 C4 G B2941 60.893 31.368 -12.300 1.00 55.44 C
ATOM 25 P C B2942 60.488 36.756 -9.557 1.00 58.27 P
ATOM 26 OP1 C B2942 60.901 37.868 -8.683 1.00 58.18 O
ATOM 27 OP2 C B2942 59.192 36.842 -10.229 1.00 58.59 O
ATOM 28 O5' C B2942 61.627 36.438 -10.617 1.00 58.68 O
TER
Atoms:
OP1: (57.573,38.194,3.985)
OP2: (58.605,36.199,2.833)
C3': (54.119,37.416,0.484)
C1': (54.873,38.217,-1.590)
C5': (55.928,38.661,1.803)
O6: (57.459,33.998,-4.931)
O4': (55.593,38.883,-0.586)
C8: (56.754,36.528,-1.475)
C2: (54.793,36.249,-5.318)
C6: (56.666,34.880,-4.619)
C5: (56.558,35.640,-3.418)
C4: (55.581,36.608,-3.334)
P: (58.037,37.561,2.764)
C4': (54.938,38.670,0.683)
C2': (53.620,37.647,-0.937)
O2': (52.638,38.665,-0.960)
N1: (55.721,35.254,-5.544)
N2: (53.971,36.467,-6.347)
N3: (54.654,36.966,-4.208)
N7: (57.300,35.595,-2.220)
N9: (55.723,37.164,-2.120)
O5': (56.890,37.631,1.688)
O3': (53.092,37.311,1.460)
OP2: (58.605,36.199,2.833)
C3': (54.119,37.416,0.484)
C1': (54.873,38.217,-1.590)
C5': (55.928,38.661,1.803)
O6: (57.459,33.998,-4.931)
O4': (55.593,38.883,-0.586)
C8: (56.754,36.528,-1.475)
C2: (54.793,36.249,-5.318)
C6: (56.666,34.880,-4.619)
C5: (56.558,35.640,-3.418)
C4: (55.581,36.608,-3.334)
P: (58.037,37.561,2.764)
C4': (54.938,38.670,0.683)
C2': (53.620,37.647,-0.937)
O2': (52.638,38.665,-0.960)
N1: (55.721,35.254,-5.544)
N2: (53.971,36.467,-6.347)
N3: (54.654,36.966,-4.208)
N7: (57.300,35.595,-2.220)
N9: (55.723,37.164,-2.120)
O5': (56.890,37.631,1.688)
O3': (53.092,37.311,1.460)
OP1: (55.561,35.072,-8.397)
OP2: (55.288,34.106,-10.762)
C3': (60.089,34.198,-9.257)
C1': (60.615,31.999,-9.851)
C5': (57.928,33.515,-8.078)
O6: (59.858,30.585,-15.631)
O4': (59.516,31.966,-8.968)
C8: (58.822,31.680,-11.628)
C2: (62.649,30.921,-13.538)
C6: (60.486,30.798,-14.599)
C5: (59.990,31.165,-13.324)
C4: (60.893,31.368,-12.300)
P: (55.713,33.940,-9.344)
C4': (59.378,33.248,-8.311)
C2': (61.269,33.362,-9.700)
O2': (62.187,33.260,-8.636)
N1: (61.856,30.694,-14.618)
N2: (63.935,30.776,-13.773)
N3: (62.235,31.266,-12.342)
N7: (58.689,31.375,-12.894)
N9: (60.132,31.731,-11.219)
O5': (57.190,33.398,-9.279)
O3': (60.456,35.428,-8.656)
OP2: (55.288,34.106,-10.762)
C3': (60.089,34.198,-9.257)
C1': (60.615,31.999,-9.851)
C5': (57.928,33.515,-8.078)
O6: (59.858,30.585,-15.631)
O4': (59.516,31.966,-8.968)
C8: (58.822,31.680,-11.628)
C2: (62.649,30.921,-13.538)
C6: (60.486,30.798,-14.599)
C5: (59.990,31.165,-13.324)
C4: (60.893,31.368,-12.300)
P: (55.713,33.940,-9.344)
C4': (59.378,33.248,-8.311)
C2': (61.269,33.362,-9.700)
O2': (62.187,33.260,-8.636)
N1: (61.856,30.694,-14.618)
N2: (63.935,30.776,-13.773)
N3: (62.235,31.266,-12.342)
N7: (58.689,31.375,-12.894)
N9: (60.132,31.731,-11.219)
O5': (57.190,33.398,-9.279)
O3': (60.456,35.428,-8.656)
Image (generated by PyMOL):