Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1603:11378
Extra
PDB:
ATOM 1 O3' G A 602 67.130 -2.358 81.867 1.00 39.10 O
ATOM 2 P G A 603 67.598 -3.562 80.924 1.00 33.72 P
ATOM 3 OP1 G A 603 68.042 -4.643 81.842 1.00 33.86 O
ATOM 4 OP2 G A 603 68.536 -3.031 79.946 1.00 33.74 O
ATOM 5 O5' G A 603 66.242 -3.987 80.191 1.00 33.46 O
ATOM 6 C5' G A 603 65.098 -4.358 80.952 1.00 33.41 C
ATOM 7 C4' G A 603 63.860 -4.301 80.138 1.00 33.18 C
ATOM 8 O4' G A 603 63.627 -2.931 79.735 1.00 33.16 O
ATOM 9 C3' G A 603 63.894 -5.069 78.831 1.00 33.03 C
ATOM 10 O3' G A 603 63.593 -6.449 78.965 1.00 32.99 O
ATOM 11 C2' G A 603 62.842 -4.332 77.996 1.00 32.86 C
ATOM 12 O2' G A 603 61.534 -4.737 78.359 1.00 32.76 O
ATOM 13 C1' G A 603 63.028 -2.893 78.452 1.00 32.96 C
ATOM 14 N9 G A 603 63.898 -2.166 77.525 1.00 32.99 N
ATOM 15 C8 G A 603 65.219 -1.937 77.681 1.00 33.15 C
ATOM 16 N7 G A 603 65.768 -1.369 76.668 1.00 33.14 N
ATOM 17 C5 G A 603 64.742 -1.198 75.800 1.00 32.96 C
ATOM 18 C6 G A 603 64.739 -0.600 74.544 1.00 32.89 C
ATOM 19 O6 G A 603 65.666 -0.090 73.921 1.00 32.96 O
ATOM 20 N1 G A 603 63.530 -0.632 73.926 1.00 32.72 N
ATOM 21 C2 G A 603 62.440 -1.133 74.461 1.00 32.63 C
ATOM 22 N2 G A 603 61.414 -0.991 73.649 1.00 32.48 N
ATOM 23 N3 G A 603 62.396 -1.696 75.669 1.00 32.69 N
ATOM 24 C4 G A 603 63.589 -1.689 76.291 1.00 32.86 C
ATOM 25 P A A 604 64.526 -7.507 79.762 1.00 35.66 P
ATOM 26 OP1 A A 604 63.997 -7.656 81.141 1.00 35.75 O
ATOM 27 OP2 A A 604 65.888 -7.118 79.585 1.00 35.80 O
ATOM 28 O5' A A 604 64.243 -8.830 78.957 1.00 35.54 O
TER
ATOM 1 O3' A B1377 62.576 2.317 69.952 1.00 30.36 O
ATOM 2 P G B1378 62.106 1.634 71.321 1.00 33.00 P
ATOM 3 OP1 G B1378 61.774 2.663 72.283 1.00 33.09 O
ATOM 4 OP2 G B1378 63.105 0.636 71.662 1.00 33.05 O
ATOM 5 O5' G B1378 60.796 0.933 70.885 1.00 32.82 O
ATOM 6 C5' G B1378 59.573 1.445 71.269 1.00 32.77 C
ATOM 7 C4' G B1378 58.672 1.568 70.094 1.00 32.66 C
ATOM 8 O4' G B1378 59.336 1.176 68.862 1.00 32.63 O
ATOM 9 C3' G B1378 57.405 0.763 70.160 1.00 32.52 C
ATOM 10 O3' G B1378 56.364 1.648 69.846 1.00 32.49 O
ATOM 11 C2' G B1378 57.576 -0.257 69.030 1.00 32.44 C
ATOM 12 O2' G B1378 56.356 -0.678 68.482 1.00 32.32 O
ATOM 13 C1' G B1378 58.387 0.576 68.054 1.00 32.50 C
ATOM 14 N9 G B1378 59.070 -0.136 67.008 1.00 32.48 N
ATOM 15 C8 G B1378 59.610 -1.348 67.103 1.00 32.47 C
ATOM 16 N7 G B1378 60.218 -1.695 66.015 1.00 32.48 N
ATOM 17 C5 G B1378 60.062 -0.686 65.130 1.00 32.50 C
ATOM 18 C6 G B1378 60.533 -0.621 63.798 1.00 32.52 C
ATOM 19 O6 G B1378 61.188 -1.477 63.186 1.00 32.54 O
ATOM 20 N1 G B1378 60.143 0.585 63.221 1.00 32.55 N
ATOM 21 C2 G B1378 59.424 1.560 63.892 1.00 32.55 C
ATOM 22 N2 G B1378 59.158 2.638 63.178 1.00 32.60 N
ATOM 23 N3 G B1378 58.999 1.490 65.162 1.00 32.53 N
ATOM 24 C4 G B1378 59.344 0.316 65.733 1.00 32.50 C
ATOM 25 P A B1379 55.530 2.263 71.018 1.00 33.80 P
ATOM 26 OP1 A B1379 54.386 2.970 70.415 1.00 33.76 O
ATOM 27 OP2 A B1379 56.418 3.030 71.870 1.00 33.95 O
ATOM 28 O5' A B1379 55.021 0.945 71.729 1.00 33.72 O
TER
ATOM 2 P G A 603 67.598 -3.562 80.924 1.00 33.72 P
ATOM 3 OP1 G A 603 68.042 -4.643 81.842 1.00 33.86 O
ATOM 4 OP2 G A 603 68.536 -3.031 79.946 1.00 33.74 O
ATOM 5 O5' G A 603 66.242 -3.987 80.191 1.00 33.46 O
ATOM 6 C5' G A 603 65.098 -4.358 80.952 1.00 33.41 C
ATOM 7 C4' G A 603 63.860 -4.301 80.138 1.00 33.18 C
ATOM 8 O4' G A 603 63.627 -2.931 79.735 1.00 33.16 O
ATOM 9 C3' G A 603 63.894 -5.069 78.831 1.00 33.03 C
ATOM 10 O3' G A 603 63.593 -6.449 78.965 1.00 32.99 O
ATOM 11 C2' G A 603 62.842 -4.332 77.996 1.00 32.86 C
ATOM 12 O2' G A 603 61.534 -4.737 78.359 1.00 32.76 O
ATOM 13 C1' G A 603 63.028 -2.893 78.452 1.00 32.96 C
ATOM 14 N9 G A 603 63.898 -2.166 77.525 1.00 32.99 N
ATOM 15 C8 G A 603 65.219 -1.937 77.681 1.00 33.15 C
ATOM 16 N7 G A 603 65.768 -1.369 76.668 1.00 33.14 N
ATOM 17 C5 G A 603 64.742 -1.198 75.800 1.00 32.96 C
ATOM 18 C6 G A 603 64.739 -0.600 74.544 1.00 32.89 C
ATOM 19 O6 G A 603 65.666 -0.090 73.921 1.00 32.96 O
ATOM 20 N1 G A 603 63.530 -0.632 73.926 1.00 32.72 N
ATOM 21 C2 G A 603 62.440 -1.133 74.461 1.00 32.63 C
ATOM 22 N2 G A 603 61.414 -0.991 73.649 1.00 32.48 N
ATOM 23 N3 G A 603 62.396 -1.696 75.669 1.00 32.69 N
ATOM 24 C4 G A 603 63.589 -1.689 76.291 1.00 32.86 C
ATOM 25 P A A 604 64.526 -7.507 79.762 1.00 35.66 P
ATOM 26 OP1 A A 604 63.997 -7.656 81.141 1.00 35.75 O
ATOM 27 OP2 A A 604 65.888 -7.118 79.585 1.00 35.80 O
ATOM 28 O5' A A 604 64.243 -8.830 78.957 1.00 35.54 O
TER
ATOM 1 O3' A B1377 62.576 2.317 69.952 1.00 30.36 O
ATOM 2 P G B1378 62.106 1.634 71.321 1.00 33.00 P
ATOM 3 OP1 G B1378 61.774 2.663 72.283 1.00 33.09 O
ATOM 4 OP2 G B1378 63.105 0.636 71.662 1.00 33.05 O
ATOM 5 O5' G B1378 60.796 0.933 70.885 1.00 32.82 O
ATOM 6 C5' G B1378 59.573 1.445 71.269 1.00 32.77 C
ATOM 7 C4' G B1378 58.672 1.568 70.094 1.00 32.66 C
ATOM 8 O4' G B1378 59.336 1.176 68.862 1.00 32.63 O
ATOM 9 C3' G B1378 57.405 0.763 70.160 1.00 32.52 C
ATOM 10 O3' G B1378 56.364 1.648 69.846 1.00 32.49 O
ATOM 11 C2' G B1378 57.576 -0.257 69.030 1.00 32.44 C
ATOM 12 O2' G B1378 56.356 -0.678 68.482 1.00 32.32 O
ATOM 13 C1' G B1378 58.387 0.576 68.054 1.00 32.50 C
ATOM 14 N9 G B1378 59.070 -0.136 67.008 1.00 32.48 N
ATOM 15 C8 G B1378 59.610 -1.348 67.103 1.00 32.47 C
ATOM 16 N7 G B1378 60.218 -1.695 66.015 1.00 32.48 N
ATOM 17 C5 G B1378 60.062 -0.686 65.130 1.00 32.50 C
ATOM 18 C6 G B1378 60.533 -0.621 63.798 1.00 32.52 C
ATOM 19 O6 G B1378 61.188 -1.477 63.186 1.00 32.54 O
ATOM 20 N1 G B1378 60.143 0.585 63.221 1.00 32.55 N
ATOM 21 C2 G B1378 59.424 1.560 63.892 1.00 32.55 C
ATOM 22 N2 G B1378 59.158 2.638 63.178 1.00 32.60 N
ATOM 23 N3 G B1378 58.999 1.490 65.162 1.00 32.53 N
ATOM 24 C4 G B1378 59.344 0.316 65.733 1.00 32.50 C
ATOM 25 P A B1379 55.530 2.263 71.018 1.00 33.80 P
ATOM 26 OP1 A B1379 54.386 2.970 70.415 1.00 33.76 O
ATOM 27 OP2 A B1379 56.418 3.030 71.870 1.00 33.95 O
ATOM 28 O5' A B1379 55.021 0.945 71.729 1.00 33.72 O
TER
Atoms:
OP1: (68.042,-4.643,81.842)
OP2: (68.536,-3.031,79.946)
C3': (63.894,-5.069,78.831)
C1': (63.028,-2.893,78.452)
C5': (65.098,-4.358,80.952)
O6: (65.666,-0.090,73.921)
O4': (63.627,-2.931,79.735)
C8: (65.219,-1.937,77.681)
C2: (62.440,-1.133,74.461)
C6: (64.739,-0.600,74.544)
C5: (64.742,-1.198,75.800)
C4: (63.589,-1.689,76.291)
P: (67.598,-3.562,80.924)
C4': (63.860,-4.301,80.138)
C2': (62.842,-4.332,77.996)
O2': (61.534,-4.737,78.359)
N1: (63.530,-0.632,73.926)
N2: (61.414,-0.991,73.649)
N3: (62.396,-1.696,75.669)
N7: (65.768,-1.369,76.668)
N9: (63.898,-2.166,77.525)
O5': (66.242,-3.987,80.191)
O3': (63.593,-6.449,78.965)
OP2: (68.536,-3.031,79.946)
C3': (63.894,-5.069,78.831)
C1': (63.028,-2.893,78.452)
C5': (65.098,-4.358,80.952)
O6: (65.666,-0.090,73.921)
O4': (63.627,-2.931,79.735)
C8: (65.219,-1.937,77.681)
C2: (62.440,-1.133,74.461)
C6: (64.739,-0.600,74.544)
C5: (64.742,-1.198,75.800)
C4: (63.589,-1.689,76.291)
P: (67.598,-3.562,80.924)
C4': (63.860,-4.301,80.138)
C2': (62.842,-4.332,77.996)
O2': (61.534,-4.737,78.359)
N1: (63.530,-0.632,73.926)
N2: (61.414,-0.991,73.649)
N3: (62.396,-1.696,75.669)
N7: (65.768,-1.369,76.668)
N9: (63.898,-2.166,77.525)
O5': (66.242,-3.987,80.191)
O3': (63.593,-6.449,78.965)
OP1: (61.774,2.663,72.283)
OP2: (63.105,0.636,71.662)
C3': (57.405,0.763,70.160)
C1': (58.387,0.576,68.054)
C5': (59.573,1.445,71.269)
O6: (61.188,-1.477,63.186)
O4': (59.336,1.176,68.862)
C8: (59.610,-1.348,67.103)
C2: (59.424,1.560,63.892)
C6: (60.533,-0.621,63.798)
C5: (60.062,-0.686,65.130)
C4: (59.344,0.316,65.733)
P: (62.106,1.634,71.321)
C4': (58.672,1.568,70.094)
C2': (57.576,-0.257,69.030)
O2': (56.356,-0.678,68.482)
N1: (60.143,0.585,63.221)
N2: (59.158,2.638,63.178)
N3: (58.999,1.490,65.162)
N7: (60.218,-1.695,66.015)
N9: (59.070,-0.136,67.008)
O5': (60.796,0.933,70.885)
O3': (56.364,1.648,69.846)
OP2: (63.105,0.636,71.662)
C3': (57.405,0.763,70.160)
C1': (58.387,0.576,68.054)
C5': (59.573,1.445,71.269)
O6: (61.188,-1.477,63.186)
O4': (59.336,1.176,68.862)
C8: (59.610,-1.348,67.103)
C2: (59.424,1.560,63.892)
C6: (60.533,-0.621,63.798)
C5: (60.062,-0.686,65.130)
C4: (59.344,0.316,65.733)
P: (62.106,1.634,71.321)
C4': (58.672,1.568,70.094)
C2': (57.576,-0.257,69.030)
O2': (56.356,-0.678,68.482)
N1: (60.143,0.585,63.221)
N2: (59.158,2.638,63.178)
N3: (58.999,1.490,65.162)
N7: (60.218,-1.695,66.015)
N9: (59.070,-0.136,67.008)
O5': (60.796,0.933,70.885)
O3': (56.364,1.648,69.846)
Image (generated by PyMOL):