Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J01:A1608:A1908
Extra
PDB:
ATOM 1 O3' G A1607 -9.597 79.212 153.755 1.00 10.65 O
ATOM 2 P G A1608 -9.361 80.138 152.474 1.00 14.27 P
ATOM 3 OP1 G A1608 -9.833 79.390 151.282 1.00 16.47 O
ATOM 4 OP2 G A1608 -7.982 80.682 152.496 1.00 16.47 O
ATOM 5 O5' G A1608 -10.429 81.274 152.751 1.00 12.80 O
ATOM 6 C5' G A1608 -10.578 82.335 151.849 1.00 12.80 C
ATOM 7 C4' G A1608 -10.674 83.640 152.589 1.00 12.80 C
ATOM 8 O4' G A1608 -9.888 83.639 153.819 1.00 12.80 O
ATOM 9 C3' G A1608 -10.104 84.735 151.719 1.00 12.80 C
ATOM 10 O3' G A1608 -10.846 85.893 151.982 1.00 12.80 O
ATOM 11 C2' G A1608 -8.680 84.851 152.233 1.00 12.80 C
ATOM 12 O2' G A1608 -8.061 86.074 151.952 1.00 12.80 O
ATOM 13 C1' G A1608 -8.891 84.633 153.728 1.00 12.80 C
ATOM 14 N9 G A1608 -7.698 84.209 154.458 1.00 45.51 N
ATOM 15 C8 G A1608 -7.040 83.003 154.385 1.00 45.51 C
ATOM 16 N7 G A1608 -5.995 82.942 155.166 1.00 45.51 N
ATOM 17 C5 G A1608 -5.966 84.178 155.796 1.00 45.51 C
ATOM 18 C6 G A1608 -5.072 84.694 156.760 1.00 45.51 C
ATOM 19 O6 G A1608 -4.103 84.136 157.284 1.00 45.51 O
ATOM 20 N1 G A1608 -5.396 85.998 157.116 1.00 45.51 N
ATOM 21 C2 G A1608 -6.448 86.714 156.617 1.00 45.51 C
ATOM 22 N2 G A1608 -6.578 87.967 157.069 1.00 45.51 N
ATOM 23 N3 G A1608 -7.304 86.239 155.733 1.00 45.51 N
ATOM 24 C4 G A1608 -7.004 84.973 155.367 1.00 45.51 C
ATOM 25 P A A1609 -11.719 86.542 150.818 1.00 12.67 P
ATOM 26 OP1 A A1609 -12.806 85.583 150.451 1.00 35.67 O
ATOM 27 OP2 A A1609 -10.759 87.005 149.778 1.00 35.67 O
ATOM 28 O5' A A1609 -12.363 87.820 151.516 1.00 3.03 O
TER
ATOM 1 O3' U B1907 -1.806 88.642 158.091 1.00 11.86 O
ATOM 2 P G B1908 -2.673 88.257 159.390 1.00 20.09 P
ATOM 3 OP1 G B1908 -1.745 87.708 160.379 1.00 3.67 O
ATOM 4 OP2 G B1908 -3.869 87.484 158.992 1.00 3.67 O
ATOM 5 O5' G B1908 -3.183 89.637 159.966 1.00 26.59 O
ATOM 6 C5' G B1908 -4.206 90.358 159.282 1.00 26.59 C
ATOM 7 C4' G B1908 -5.101 91.016 160.275 1.00 26.59 C
ATOM 8 O4' G B1908 -5.788 90.000 161.018 1.00 26.59 O
ATOM 9 C3' G B1908 -4.325 91.851 161.267 1.00 26.59 C
ATOM 10 O3' G B1908 -4.181 93.126 160.599 1.00 26.59 O
ATOM 11 C2' G B1908 -5.109 91.694 162.574 1.00 26.59 C
ATOM 12 O2' G B1908 -6.144 92.648 162.756 1.00 26.59 O
ATOM 13 C1' G B1908 -5.766 90.314 162.381 1.00 26.59 C
ATOM 14 N9 G B1908 -5.280 89.116 163.050 1.00 7.67 N
ATOM 15 C8 G B1908 -4.042 88.527 162.953 1.00 7.67 C
ATOM 16 N7 G B1908 -3.981 87.366 163.553 1.00 7.67 N
ATOM 17 C5 G B1908 -5.246 87.196 164.105 1.00 7.67 C
ATOM 18 C6 G B1908 -5.802 86.109 164.850 1.00 7.67 C
ATOM 19 O6 G B1908 -5.282 85.043 165.148 1.00 7.67 O
ATOM 20 N1 G B1908 -7.115 86.358 165.233 1.00 7.67 N
ATOM 21 C2 G B1908 -7.820 87.494 164.921 1.00 7.67 C
ATOM 22 N2 G B1908 -9.066 87.560 165.388 1.00 7.67 N
ATOM 23 N3 G B1908 -7.334 88.497 164.205 1.00 7.67 N
ATOM 24 C4 G B1908 -6.046 88.283 163.836 1.00 7.67 C
ATOM 25 P U B1909 -4.896 94.463 161.150 1.00 20.14 P
ATOM 26 OP1 U B1909 -4.335 95.567 160.334 1.00 20.14 O
ATOM 27 OP2 U B1909 -4.816 94.544 162.627 1.00 20.14 O
ATOM 28 O5' U B1909 -6.427 94.381 160.764 1.00 4.63 O
TER
ATOM 2 P G A1608 -9.361 80.138 152.474 1.00 14.27 P
ATOM 3 OP1 G A1608 -9.833 79.390 151.282 1.00 16.47 O
ATOM 4 OP2 G A1608 -7.982 80.682 152.496 1.00 16.47 O
ATOM 5 O5' G A1608 -10.429 81.274 152.751 1.00 12.80 O
ATOM 6 C5' G A1608 -10.578 82.335 151.849 1.00 12.80 C
ATOM 7 C4' G A1608 -10.674 83.640 152.589 1.00 12.80 C
ATOM 8 O4' G A1608 -9.888 83.639 153.819 1.00 12.80 O
ATOM 9 C3' G A1608 -10.104 84.735 151.719 1.00 12.80 C
ATOM 10 O3' G A1608 -10.846 85.893 151.982 1.00 12.80 O
ATOM 11 C2' G A1608 -8.680 84.851 152.233 1.00 12.80 C
ATOM 12 O2' G A1608 -8.061 86.074 151.952 1.00 12.80 O
ATOM 13 C1' G A1608 -8.891 84.633 153.728 1.00 12.80 C
ATOM 14 N9 G A1608 -7.698 84.209 154.458 1.00 45.51 N
ATOM 15 C8 G A1608 -7.040 83.003 154.385 1.00 45.51 C
ATOM 16 N7 G A1608 -5.995 82.942 155.166 1.00 45.51 N
ATOM 17 C5 G A1608 -5.966 84.178 155.796 1.00 45.51 C
ATOM 18 C6 G A1608 -5.072 84.694 156.760 1.00 45.51 C
ATOM 19 O6 G A1608 -4.103 84.136 157.284 1.00 45.51 O
ATOM 20 N1 G A1608 -5.396 85.998 157.116 1.00 45.51 N
ATOM 21 C2 G A1608 -6.448 86.714 156.617 1.00 45.51 C
ATOM 22 N2 G A1608 -6.578 87.967 157.069 1.00 45.51 N
ATOM 23 N3 G A1608 -7.304 86.239 155.733 1.00 45.51 N
ATOM 24 C4 G A1608 -7.004 84.973 155.367 1.00 45.51 C
ATOM 25 P A A1609 -11.719 86.542 150.818 1.00 12.67 P
ATOM 26 OP1 A A1609 -12.806 85.583 150.451 1.00 35.67 O
ATOM 27 OP2 A A1609 -10.759 87.005 149.778 1.00 35.67 O
ATOM 28 O5' A A1609 -12.363 87.820 151.516 1.00 3.03 O
TER
ATOM 1 O3' U B1907 -1.806 88.642 158.091 1.00 11.86 O
ATOM 2 P G B1908 -2.673 88.257 159.390 1.00 20.09 P
ATOM 3 OP1 G B1908 -1.745 87.708 160.379 1.00 3.67 O
ATOM 4 OP2 G B1908 -3.869 87.484 158.992 1.00 3.67 O
ATOM 5 O5' G B1908 -3.183 89.637 159.966 1.00 26.59 O
ATOM 6 C5' G B1908 -4.206 90.358 159.282 1.00 26.59 C
ATOM 7 C4' G B1908 -5.101 91.016 160.275 1.00 26.59 C
ATOM 8 O4' G B1908 -5.788 90.000 161.018 1.00 26.59 O
ATOM 9 C3' G B1908 -4.325 91.851 161.267 1.00 26.59 C
ATOM 10 O3' G B1908 -4.181 93.126 160.599 1.00 26.59 O
ATOM 11 C2' G B1908 -5.109 91.694 162.574 1.00 26.59 C
ATOM 12 O2' G B1908 -6.144 92.648 162.756 1.00 26.59 O
ATOM 13 C1' G B1908 -5.766 90.314 162.381 1.00 26.59 C
ATOM 14 N9 G B1908 -5.280 89.116 163.050 1.00 7.67 N
ATOM 15 C8 G B1908 -4.042 88.527 162.953 1.00 7.67 C
ATOM 16 N7 G B1908 -3.981 87.366 163.553 1.00 7.67 N
ATOM 17 C5 G B1908 -5.246 87.196 164.105 1.00 7.67 C
ATOM 18 C6 G B1908 -5.802 86.109 164.850 1.00 7.67 C
ATOM 19 O6 G B1908 -5.282 85.043 165.148 1.00 7.67 O
ATOM 20 N1 G B1908 -7.115 86.358 165.233 1.00 7.67 N
ATOM 21 C2 G B1908 -7.820 87.494 164.921 1.00 7.67 C
ATOM 22 N2 G B1908 -9.066 87.560 165.388 1.00 7.67 N
ATOM 23 N3 G B1908 -7.334 88.497 164.205 1.00 7.67 N
ATOM 24 C4 G B1908 -6.046 88.283 163.836 1.00 7.67 C
ATOM 25 P U B1909 -4.896 94.463 161.150 1.00 20.14 P
ATOM 26 OP1 U B1909 -4.335 95.567 160.334 1.00 20.14 O
ATOM 27 OP2 U B1909 -4.816 94.544 162.627 1.00 20.14 O
ATOM 28 O5' U B1909 -6.427 94.381 160.764 1.00 4.63 O
TER
Atoms:
OP1: (-9.833,79.390,151.282)
OP2: (-7.982,80.682,152.496)
C3': (-10.104,84.735,151.719)
C1': (-8.891,84.633,153.728)
C5': (-10.578,82.335,151.849)
O6: (-4.103,84.136,157.284)
O4': (-9.888,83.639,153.819)
C8: (-7.040,83.003,154.385)
C2: (-6.448,86.714,156.617)
C6: (-5.072,84.694,156.760)
C5: (-5.966,84.178,155.796)
C4: (-7.004,84.973,155.367)
P: (-9.361,80.138,152.474)
C4': (-10.674,83.640,152.589)
C2': (-8.680,84.851,152.233)
O2': (-8.061,86.074,151.952)
N1: (-5.396,85.998,157.116)
N2: (-6.578,87.967,157.069)
N3: (-7.304,86.239,155.733)
N7: (-5.995,82.942,155.166)
N9: (-7.698,84.209,154.458)
O5': (-10.429,81.274,152.751)
O3': (-10.846,85.893,151.982)
OP2: (-7.982,80.682,152.496)
C3': (-10.104,84.735,151.719)
C1': (-8.891,84.633,153.728)
C5': (-10.578,82.335,151.849)
O6: (-4.103,84.136,157.284)
O4': (-9.888,83.639,153.819)
C8: (-7.040,83.003,154.385)
C2: (-6.448,86.714,156.617)
C6: (-5.072,84.694,156.760)
C5: (-5.966,84.178,155.796)
C4: (-7.004,84.973,155.367)
P: (-9.361,80.138,152.474)
C4': (-10.674,83.640,152.589)
C2': (-8.680,84.851,152.233)
O2': (-8.061,86.074,151.952)
N1: (-5.396,85.998,157.116)
N2: (-6.578,87.967,157.069)
N3: (-7.304,86.239,155.733)
N7: (-5.995,82.942,155.166)
N9: (-7.698,84.209,154.458)
O5': (-10.429,81.274,152.751)
O3': (-10.846,85.893,151.982)
OP1: (-1.745,87.708,160.379)
OP2: (-3.869,87.484,158.992)
C3': (-4.325,91.851,161.267)
C1': (-5.766,90.314,162.381)
C5': (-4.206,90.358,159.282)
O6: (-5.282,85.043,165.148)
O4': (-5.788,90.000,161.018)
C8: (-4.042,88.527,162.953)
C2: (-7.820,87.494,164.921)
C6: (-5.802,86.109,164.850)
C5: (-5.246,87.196,164.105)
C4: (-6.046,88.283,163.836)
P: (-2.673,88.257,159.390)
C4': (-5.101,91.016,160.275)
C2': (-5.109,91.694,162.574)
O2': (-6.144,92.648,162.756)
N1: (-7.115,86.358,165.233)
N2: (-9.066,87.560,165.388)
N3: (-7.334,88.497,164.205)
N7: (-3.981,87.366,163.553)
N9: (-5.280,89.116,163.050)
O5': (-3.183,89.637,159.966)
O3': (-4.181,93.126,160.599)
OP2: (-3.869,87.484,158.992)
C3': (-4.325,91.851,161.267)
C1': (-5.766,90.314,162.381)
C5': (-4.206,90.358,159.282)
O6: (-5.282,85.043,165.148)
O4': (-5.788,90.000,161.018)
C8: (-4.042,88.527,162.953)
C2: (-7.820,87.494,164.921)
C6: (-5.802,86.109,164.850)
C5: (-5.246,87.196,164.105)
C4: (-6.046,88.283,163.836)
P: (-2.673,88.257,159.390)
C4': (-5.101,91.016,160.275)
C2': (-5.109,91.694,162.574)
O2': (-6.144,92.648,162.756)
N1: (-7.115,86.358,165.233)
N2: (-9.066,87.560,165.388)
N3: (-7.334,88.497,164.205)
N7: (-3.981,87.366,163.553)
N9: (-5.280,89.116,163.050)
O5': (-3.183,89.637,159.966)
O3': (-4.181,93.126,160.599)
Image (generated by PyMOL):