ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OH5:A403:A401

Extra

PDB:
ATOM 1 O3' U A 402 93.259 -33.841 -62.731 1.00 47.48 O
ATOM 2 P G A 403 94.812 -34.140 -62.407 1.00 39.46 P
ATOM 3 OP1 G A 403 94.887 -34.687 -61.029 1.00 41.46 O
ATOM 4 OP2 G A 403 95.561 -32.911 -62.736 1.00 42.92 O
ATOM 5 O5' G A 403 95.181 -35.271 -63.445 1.00 35.55 O
ATOM 6 C5' G A 403 95.386 -34.973 -64.813 1.00 34.85 C
ATOM 7 C4' G A 403 95.545 -36.237 -65.595 1.00 40.29 C
ATOM 8 O4' G A 403 94.371 -37.048 -65.409 1.00 48.84 O
ATOM 9 C3' G A 403 95.683 -36.101 -67.099 1.00 38.80 C
ATOM 10 O3' G A 403 97.012 -35.798 -67.501 1.00 35.94 O
ATOM 11 C2' G A 403 95.199 -37.459 -67.595 1.00 36.60 C
ATOM 12 O2' G A 403 96.224 -38.429 -67.463 1.00 45.56 O
ATOM 13 C1' G A 403 94.113 -37.791 -66.572 1.00 48.81 C
ATOM 14 N9 G A 403 92.756 -37.459 -67.041 1.00 46.25 N
ATOM 15 C8 G A 403 92.362 -36.554 -67.980 1.00 51.07 C
ATOM 16 N7 G A 403 91.064 -36.520 -68.138 1.00 50.04 N
ATOM 17 C5 G A 403 90.586 -37.451 -67.245 1.00 41.78 C
ATOM 18 C6 G A 403 89.281 -37.851 -66.952 1.00 38.34 C
ATOM 19 O6 G A 403 88.233 -37.454 -67.450 1.00 52.74 O
ATOM 20 N1 G A 403 89.225 -38.828 -65.981 1.00 37.26 N
ATOM 21 C2 G A 403 90.292 -39.363 -65.347 1.00 41.56 C
ATOM 22 N2 G A 403 90.030 -40.300 -64.435 1.00 36.04 N
ATOM 23 N3 G A 403 91.525 -38.990 -65.601 1.00 49.44 N
ATOM 24 C4 G A 403 91.602 -38.041 -66.561 1.00 47.05 C
ATOM 25 P G A 404 97.438 -34.281 -67.875 1.00 46.55 P
ATOM 26 OP1 G A 404 98.906 -34.277 -68.062 1.00 51.82 O
ATOM 27 OP2 G A 404 96.842 -33.377 -66.840 1.00 37.05 O
ATOM 28 O5' G A 404 96.721 -34.051 -69.272 1.00 49.63 O
TER

ATOM 1 O3' C B 400 87.474 -42.762 -64.751 1.00 32.92 O
ATOM 2 P G B 401 86.677 -41.387 -64.585 1.00 25.56 P
ATOM 3 OP1 G B 401 85.312 -41.706 -64.168 1.00 42.52 O
ATOM 4 OP2 G B 401 86.867 -40.607 -65.818 1.00 35.51 O
ATOM 5 O5' G B 401 87.460 -40.707 -63.377 1.00 35.87 O
ATOM 6 C5' G B 401 86.780 -40.257 -62.206 1.00 34.58 C
ATOM 7 C4' G B 401 87.737 -40.045 -61.045 1.00 39.57 C
ATOM 8 O4' G B 401 87.684 -41.215 -60.163 1.00 40.04 O
ATOM 9 C3' G B 401 89.216 -39.875 -61.430 1.00 35.83 C
ATOM 10 O3' G B 401 89.886 -39.059 -60.450 1.00 28.93 O
ATOM 11 C2' G B 401 89.720 -41.310 -61.297 1.00 38.89 C
ATOM 12 O2' G B 401 91.126 -41.439 -61.181 1.00 43.15 O
ATOM 13 C1' G B 401 88.989 -41.731 -60.018 1.00 38.52 C
ATOM 14 N9 G B 401 88.932 -43.186 -59.775 1.00 31.54 N
ATOM 15 C8 G B 401 88.546 -44.180 -60.630 1.00 30.20 C
ATOM 16 N7 G B 401 88.668 -45.374 -60.119 1.00 25.59 N
ATOM 17 C5 G B 401 89.177 -45.169 -58.849 1.00 27.69 C
ATOM 18 C6 G B 401 89.530 -46.100 -57.839 1.00 28.59 C
ATOM 19 O6 G B 401 89.446 -47.328 -57.848 1.00 35.01 O
ATOM 20 N1 G B 401 90.022 -45.486 -56.706 1.00 26.08 N
ATOM 21 C2 G B 401 90.171 -44.144 -56.549 1.00 31.29 C
ATOM 22 N2 G B 401 90.673 -43.772 -55.361 1.00 29.28 N
ATOM 23 N3 G B 401 89.850 -43.257 -57.482 1.00 31.08 N
ATOM 24 C4 G B 401 89.355 -43.829 -58.610 1.00 28.89 C
ATOM 25 P U B 402 89.755 -37.456 -60.460 1.00 40.76 P
ATOM 26 OP1 U B 402 90.618 -36.943 -59.377 1.00 58.82 O
ATOM 27 OP2 U B 402 88.310 -37.133 -60.422 1.00 65.94 O
ATOM 28 O5' U B 402 90.361 -37.047 -61.884 1.00 40.40 O
TER

Atoms:
OP1: (94.887,-34.687,-61.029)
OP2: (95.561,-32.911,-62.736)
C3': (95.683,-36.101,-67.099)
C1': (94.113,-37.791,-66.572)
C5': (95.386,-34.973,-64.813)
O6: (88.233,-37.454,-67.450)
O4': (94.371,-37.048,-65.409)
C8: (92.362,-36.554,-67.980)
C2: (90.292,-39.363,-65.347)
C6: (89.281,-37.851,-66.952)
C5: (90.586,-37.451,-67.245)
C4: (91.602,-38.041,-66.561)
P: (94.812,-34.140,-62.407)
C4': (95.545,-36.237,-65.595)
C2': (95.199,-37.459,-67.595)
O2': (96.224,-38.429,-67.463)
N1: (89.225,-38.828,-65.981)
N2: (90.030,-40.300,-64.435)
N3: (91.525,-38.990,-65.601)
N7: (91.064,-36.520,-68.138)
N9: (92.756,-37.459,-67.041)
O5': (95.181,-35.271,-63.445)
O3': (97.012,-35.798,-67.501)
OP1: (85.312,-41.706,-64.168)
OP2: (86.867,-40.607,-65.818)
C3': (89.216,-39.875,-61.430)
C1': (88.989,-41.731,-60.018)
C5': (86.780,-40.257,-62.206)
O6: (89.446,-47.328,-57.848)
O4': (87.684,-41.215,-60.163)
C8: (88.546,-44.180,-60.630)
C2: (90.171,-44.144,-56.549)
C6: (89.530,-46.100,-57.839)
C5: (89.177,-45.169,-58.849)
C4: (89.355,-43.829,-58.610)
P: (86.677,-41.387,-64.585)
C4': (87.737,-40.045,-61.045)
C2': (89.720,-41.310,-61.297)
O2': (91.126,-41.439,-61.181)
N1: (90.022,-45.486,-56.706)
N2: (90.673,-43.772,-55.361)
N3: (89.850,-43.257,-57.482)
N7: (88.668,-45.374,-60.119)
N9: (88.932,-43.186,-59.775)
O5': (87.460,-40.707,-63.377)
O3': (89.886,-39.059,-60.450)
Image (generated by PyMOL):
PyMOL image
show in jmol