Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11059:1908
Extra
PDB:
ATOM 1 O3' U A1058 49.774 -21.586 58.997 1.00 29.96 O
ATOM 2 P G A1059 48.472 -21.277 59.841 1.00 32.46 P
ATOM 3 OP1 G A1059 47.818 -20.064 59.241 1.00 32.37 O
ATOM 4 OP2 G A1059 48.878 -21.263 61.286 1.00 32.43 O
ATOM 5 O5' G A1059 47.607 -22.535 59.554 1.00 32.56 O
ATOM 6 C5' G A1059 47.216 -22.856 58.250 1.00 32.64 C
ATOM 7 C4' G A1059 46.721 -24.245 58.247 1.00 32.76 C
ATOM 8 O4' G A1059 47.826 -25.099 58.628 1.00 32.86 O
ATOM 9 C3' G A1059 45.628 -24.522 59.270 1.00 32.73 C
ATOM 10 O3' G A1059 44.316 -24.321 58.719 1.00 32.71 O
ATOM 11 C2' G A1059 45.903 -25.964 59.710 1.00 32.87 C
ATOM 12 O2' G A1059 45.239 -26.854 58.892 1.00 32.99 O
ATOM 13 C1' G A1059 47.390 -26.144 59.428 1.00 32.93 C
ATOM 14 N9 G A1059 48.227 -26.216 60.644 1.00 32.91 N
ATOM 15 C8 G A1059 49.309 -27.034 60.722 1.00 33.04 C
ATOM 16 N7 G A1059 49.860 -27.002 61.877 1.00 33.02 N
ATOM 17 C5 G A1059 49.120 -26.104 62.587 1.00 32.88 C
ATOM 18 C6 G A1059 49.269 -25.657 63.918 1.00 32.81 C
ATOM 19 O6 G A1059 50.102 -25.948 64.798 1.00 32.87 O
ATOM 20 N1 G A1059 48.300 -24.781 64.311 1.00 32.68 N
ATOM 21 C2 G A1059 47.317 -24.362 63.514 1.00 32.62 C
ATOM 22 N2 G A1059 46.541 -23.506 64.181 1.00 32.51 N
ATOM 23 N3 G A1059 47.155 -24.744 62.246 1.00 32.68 N
ATOM 24 C4 G A1059 48.100 -25.613 61.860 1.00 32.81 C
ATOM 25 P G A1060 43.323 -23.075 59.137 1.00 32.08 P
ATOM 26 OP1 G A1060 42.990 -23.200 60.564 1.00 32.03 O
ATOM 27 OP2 G A1060 42.256 -23.110 58.213 1.00 32.12 O
ATOM 28 O5' G A1060 44.137 -21.746 58.906 1.00 31.97 O
TER
ATOM 1 O3' G B 907 46.140 -22.548 68.826 1.00 33.57 O
ATOM 2 P G B 908 47.347 -23.418 68.255 1.00 33.06 P
ATOM 3 OP1 G B 908 48.603 -22.757 68.642 1.00 33.04 O
ATOM 4 OP2 G B 908 47.083 -23.647 66.788 1.00 33.06 O
ATOM 5 O5' G B 908 47.159 -24.742 69.087 1.00 33.20 O
ATOM 6 C5' G B 908 47.654 -25.971 68.651 1.00 33.33 C
ATOM 7 C4' G B 908 47.095 -27.043 69.520 1.00 33.45 C
ATOM 8 O4' G B 908 45.642 -27.024 69.437 1.00 33.41 O
ATOM 9 C3' G B 908 47.475 -28.449 69.152 1.00 33.63 C
ATOM 10 O3' G B 908 48.695 -28.800 69.703 1.00 33.72 O
ATOM 11 C2' G B 908 46.322 -29.235 69.725 1.00 33.70 C
ATOM 12 O2' G B 908 46.428 -29.251 71.148 1.00 33.75 O
ATOM 13 C1' G B 908 45.164 -28.324 69.355 1.00 33.55 C
ATOM 14 N9 G B 908 44.688 -28.521 67.984 1.00 33.55 N
ATOM 15 C8 G B 908 44.628 -27.535 67.038 1.00 33.42 C
ATOM 16 N7 G B 908 44.065 -27.937 65.918 1.00 33.46 N
ATOM 17 C5 G B 908 43.700 -29.246 66.152 1.00 33.61 C
ATOM 18 C6 G B 908 43.067 -30.196 65.350 1.00 33.74 C
ATOM 19 O6 G B 908 42.640 -30.115 64.173 1.00 33.74 O
ATOM 20 N1 G B 908 42.902 -31.398 66.007 1.00 33.90 N
ATOM 21 C2 G B 908 43.292 -31.691 67.257 1.00 33.95 C
ATOM 22 N2 G B 908 43.115 -32.903 67.726 1.00 34.12 N
ATOM 23 N3 G B 908 43.845 -30.815 68.027 1.00 33.83 N
ATOM 24 C4 G B 908 44.046 -29.611 67.415 1.00 33.67 C
ATOM 25 P A B 909 49.887 -29.315 68.786 1.00 32.22 P
ATOM 26 OP1 A B 909 51.142 -29.182 69.612 1.00 32.28 O
ATOM 27 OP2 A B 909 49.838 -28.601 67.498 1.00 32.11 O
ATOM 28 O5' A B 909 49.544 -30.841 68.574 1.00 32.41 O
TER
ATOM 2 P G A1059 48.472 -21.277 59.841 1.00 32.46 P
ATOM 3 OP1 G A1059 47.818 -20.064 59.241 1.00 32.37 O
ATOM 4 OP2 G A1059 48.878 -21.263 61.286 1.00 32.43 O
ATOM 5 O5' G A1059 47.607 -22.535 59.554 1.00 32.56 O
ATOM 6 C5' G A1059 47.216 -22.856 58.250 1.00 32.64 C
ATOM 7 C4' G A1059 46.721 -24.245 58.247 1.00 32.76 C
ATOM 8 O4' G A1059 47.826 -25.099 58.628 1.00 32.86 O
ATOM 9 C3' G A1059 45.628 -24.522 59.270 1.00 32.73 C
ATOM 10 O3' G A1059 44.316 -24.321 58.719 1.00 32.71 O
ATOM 11 C2' G A1059 45.903 -25.964 59.710 1.00 32.87 C
ATOM 12 O2' G A1059 45.239 -26.854 58.892 1.00 32.99 O
ATOM 13 C1' G A1059 47.390 -26.144 59.428 1.00 32.93 C
ATOM 14 N9 G A1059 48.227 -26.216 60.644 1.00 32.91 N
ATOM 15 C8 G A1059 49.309 -27.034 60.722 1.00 33.04 C
ATOM 16 N7 G A1059 49.860 -27.002 61.877 1.00 33.02 N
ATOM 17 C5 G A1059 49.120 -26.104 62.587 1.00 32.88 C
ATOM 18 C6 G A1059 49.269 -25.657 63.918 1.00 32.81 C
ATOM 19 O6 G A1059 50.102 -25.948 64.798 1.00 32.87 O
ATOM 20 N1 G A1059 48.300 -24.781 64.311 1.00 32.68 N
ATOM 21 C2 G A1059 47.317 -24.362 63.514 1.00 32.62 C
ATOM 22 N2 G A1059 46.541 -23.506 64.181 1.00 32.51 N
ATOM 23 N3 G A1059 47.155 -24.744 62.246 1.00 32.68 N
ATOM 24 C4 G A1059 48.100 -25.613 61.860 1.00 32.81 C
ATOM 25 P G A1060 43.323 -23.075 59.137 1.00 32.08 P
ATOM 26 OP1 G A1060 42.990 -23.200 60.564 1.00 32.03 O
ATOM 27 OP2 G A1060 42.256 -23.110 58.213 1.00 32.12 O
ATOM 28 O5' G A1060 44.137 -21.746 58.906 1.00 31.97 O
TER
ATOM 1 O3' G B 907 46.140 -22.548 68.826 1.00 33.57 O
ATOM 2 P G B 908 47.347 -23.418 68.255 1.00 33.06 P
ATOM 3 OP1 G B 908 48.603 -22.757 68.642 1.00 33.04 O
ATOM 4 OP2 G B 908 47.083 -23.647 66.788 1.00 33.06 O
ATOM 5 O5' G B 908 47.159 -24.742 69.087 1.00 33.20 O
ATOM 6 C5' G B 908 47.654 -25.971 68.651 1.00 33.33 C
ATOM 7 C4' G B 908 47.095 -27.043 69.520 1.00 33.45 C
ATOM 8 O4' G B 908 45.642 -27.024 69.437 1.00 33.41 O
ATOM 9 C3' G B 908 47.475 -28.449 69.152 1.00 33.63 C
ATOM 10 O3' G B 908 48.695 -28.800 69.703 1.00 33.72 O
ATOM 11 C2' G B 908 46.322 -29.235 69.725 1.00 33.70 C
ATOM 12 O2' G B 908 46.428 -29.251 71.148 1.00 33.75 O
ATOM 13 C1' G B 908 45.164 -28.324 69.355 1.00 33.55 C
ATOM 14 N9 G B 908 44.688 -28.521 67.984 1.00 33.55 N
ATOM 15 C8 G B 908 44.628 -27.535 67.038 1.00 33.42 C
ATOM 16 N7 G B 908 44.065 -27.937 65.918 1.00 33.46 N
ATOM 17 C5 G B 908 43.700 -29.246 66.152 1.00 33.61 C
ATOM 18 C6 G B 908 43.067 -30.196 65.350 1.00 33.74 C
ATOM 19 O6 G B 908 42.640 -30.115 64.173 1.00 33.74 O
ATOM 20 N1 G B 908 42.902 -31.398 66.007 1.00 33.90 N
ATOM 21 C2 G B 908 43.292 -31.691 67.257 1.00 33.95 C
ATOM 22 N2 G B 908 43.115 -32.903 67.726 1.00 34.12 N
ATOM 23 N3 G B 908 43.845 -30.815 68.027 1.00 33.83 N
ATOM 24 C4 G B 908 44.046 -29.611 67.415 1.00 33.67 C
ATOM 25 P A B 909 49.887 -29.315 68.786 1.00 32.22 P
ATOM 26 OP1 A B 909 51.142 -29.182 69.612 1.00 32.28 O
ATOM 27 OP2 A B 909 49.838 -28.601 67.498 1.00 32.11 O
ATOM 28 O5' A B 909 49.544 -30.841 68.574 1.00 32.41 O
TER
Atoms:
OP1: (47.818,-20.064,59.241)
OP2: (48.878,-21.263,61.286)
C3': (45.628,-24.522,59.270)
C1': (47.390,-26.144,59.428)
C5': (47.216,-22.856,58.250)
O6: (50.102,-25.948,64.798)
O4': (47.826,-25.099,58.628)
C8: (49.309,-27.034,60.722)
C2: (47.317,-24.362,63.514)
C6: (49.269,-25.657,63.918)
C5: (49.120,-26.104,62.587)
C4: (48.100,-25.613,61.860)
P: (48.472,-21.277,59.841)
C4': (46.721,-24.245,58.247)
C2': (45.903,-25.964,59.710)
O2': (45.239,-26.854,58.892)
N1: (48.300,-24.781,64.311)
N2: (46.541,-23.506,64.181)
N3: (47.155,-24.744,62.246)
N7: (49.860,-27.002,61.877)
N9: (48.227,-26.216,60.644)
O5': (47.607,-22.535,59.554)
O3': (44.316,-24.321,58.719)
OP2: (48.878,-21.263,61.286)
C3': (45.628,-24.522,59.270)
C1': (47.390,-26.144,59.428)
C5': (47.216,-22.856,58.250)
O6: (50.102,-25.948,64.798)
O4': (47.826,-25.099,58.628)
C8: (49.309,-27.034,60.722)
C2: (47.317,-24.362,63.514)
C6: (49.269,-25.657,63.918)
C5: (49.120,-26.104,62.587)
C4: (48.100,-25.613,61.860)
P: (48.472,-21.277,59.841)
C4': (46.721,-24.245,58.247)
C2': (45.903,-25.964,59.710)
O2': (45.239,-26.854,58.892)
N1: (48.300,-24.781,64.311)
N2: (46.541,-23.506,64.181)
N3: (47.155,-24.744,62.246)
N7: (49.860,-27.002,61.877)
N9: (48.227,-26.216,60.644)
O5': (47.607,-22.535,59.554)
O3': (44.316,-24.321,58.719)
OP1: (48.603,-22.757,68.642)
OP2: (47.083,-23.647,66.788)
C3': (47.475,-28.449,69.152)
C1': (45.164,-28.324,69.355)
C5': (47.654,-25.971,68.651)
O6: (42.640,-30.115,64.173)
O4': (45.642,-27.024,69.437)
C8: (44.628,-27.535,67.038)
C2: (43.292,-31.691,67.257)
C6: (43.067,-30.196,65.350)
C5: (43.700,-29.246,66.152)
C4: (44.046,-29.611,67.415)
P: (47.347,-23.418,68.255)
C4': (47.095,-27.043,69.520)
C2': (46.322,-29.235,69.725)
O2': (46.428,-29.251,71.148)
N1: (42.902,-31.398,66.007)
N2: (43.115,-32.903,67.726)
N3: (43.845,-30.815,68.027)
N7: (44.065,-27.937,65.918)
N9: (44.688,-28.521,67.984)
O5': (47.159,-24.742,69.087)
O3': (48.695,-28.800,69.703)
OP2: (47.083,-23.647,66.788)
C3': (47.475,-28.449,69.152)
C1': (45.164,-28.324,69.355)
C5': (47.654,-25.971,68.651)
O6: (42.640,-30.115,64.173)
O4': (45.642,-27.024,69.437)
C8: (44.628,-27.535,67.038)
C2: (43.292,-31.691,67.257)
C6: (43.067,-30.196,65.350)
C5: (43.700,-29.246,66.152)
C4: (44.046,-29.611,67.415)
P: (47.347,-23.418,68.255)
C4': (47.095,-27.043,69.520)
C2': (46.322,-29.235,69.725)
O2': (46.428,-29.251,71.148)
N1: (42.902,-31.398,66.007)
N2: (43.115,-32.903,67.726)
N3: (43.845,-30.815,68.027)
N7: (44.065,-27.937,65.918)
N9: (44.688,-28.521,67.984)
O5': (47.159,-24.742,69.087)
O3': (48.695,-28.800,69.703)
Image (generated by PyMOL):