Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2350:A2353
Extra
PDB:
ATOM 1 O3' U A2349 -118.797 -66.479 31.675 1.00 0.01 O
ATOM 2 P G A2350 -117.601 -67.483 31.409 1.00 0.01 P
ATOM 3 OP1 G A2350 -117.703 -67.920 30.011 1.00 0.01 O
ATOM 4 OP2 G A2350 -117.632 -68.494 32.471 1.00 0.01 O
ATOM 5 O5' G A2350 -116.337 -66.561 31.589 1.00 0.01 O
ATOM 6 C5' G A2350 -115.196 -67.021 32.289 1.00 0.01 C
ATOM 7 C4' G A2350 -114.661 -65.960 33.203 1.00 0.01 C
ATOM 8 O4' G A2350 -115.602 -65.718 34.272 1.00 0.01 O
ATOM 9 C3' G A2350 -113.384 -66.289 33.944 1.00 0.01 C
ATOM 10 O3' G A2350 -112.226 -66.254 33.130 1.00 0.01 O
ATOM 11 C2' G A2350 -113.405 -65.266 35.079 1.00 0.01 C
ATOM 12 O2' G A2350 -112.982 -63.972 34.647 1.00 0.01 O
ATOM 13 C1' G A2350 -114.907 -65.225 35.401 1.00 0.01 C
ATOM 14 N9 G A2350 -115.227 -66.069 36.551 1.00 0.18 N
ATOM 15 C8 G A2350 -116.021 -67.169 36.632 1.00 0.18 C
ATOM 16 N7 G A2350 -116.064 -67.679 37.837 1.00 0.18 N
ATOM 17 C5 G A2350 -115.225 -66.867 38.541 1.00 0.18 C
ATOM 18 C6 G A2350 -114.863 -66.938 39.872 1.00 0.18 C
ATOM 19 O6 G A2350 -115.226 -67.763 40.699 1.00 0.18 O
ATOM 20 N1 G A2350 -113.991 -65.925 40.223 1.00 0.18 N
ATOM 21 C2 G A2350 -113.515 -64.973 39.369 1.00 0.18 C
ATOM 22 N2 G A2350 -112.682 -64.075 39.908 1.00 0.18 N
ATOM 23 N3 G A2350 -113.843 -64.903 38.095 1.00 0.18 N
ATOM 24 C4 G A2350 -114.699 -65.878 37.777 1.00 0.18 C
ATOM 25 P A A2351 -111.603 -67.627 32.592 1.00 0.01 P
ATOM 26 OP1 A A2351 -111.046 -67.366 31.262 1.00 0.01 O
ATOM 27 OP2 A A2351 -112.636 -68.660 32.730 1.00 0.01 O
ATOM 28 O5' A A2351 -110.447 -67.908 33.615 1.00 0.01 O
TER
ATOM 1 O3' C B2352 -109.672 -65.759 42.553 1.00 0.01 O
ATOM 2 P G B2353 -110.641 -64.762 43.303 1.00 0.01 P
ATOM 3 OP1 G B2353 -110.595 -65.101 44.741 1.00 0.01 O
ATOM 4 OP2 G B2353 -111.931 -64.818 42.608 1.00 0.01 O
ATOM 5 O5' G B2353 -109.945 -63.367 43.053 1.00 0.01 O
ATOM 6 C5' G B2353 -109.028 -62.855 43.987 1.00 0.01 C
ATOM 7 C4' G B2353 -108.767 -61.404 43.750 1.00 0.01 C
ATOM 8 O4' G B2353 -108.273 -61.221 42.405 1.00 0.01 O
ATOM 9 C3' G B2353 -109.979 -60.517 43.830 1.00 0.01 C
ATOM 10 O3' G B2353 -110.300 -60.151 45.147 1.00 0.01 O
ATOM 11 C2' G B2353 -109.619 -59.352 42.909 1.00 0.01 C
ATOM 12 O2' G B2353 -108.776 -58.407 43.527 1.00 0.01 O
ATOM 13 C1' G B2353 -108.828 -60.066 41.834 1.00 0.01 C
ATOM 14 N9 G B2353 -109.702 -60.470 40.743 1.00 0.01 N
ATOM 15 C8 G B2353 -110.563 -61.531 40.741 1.00 0.01 C
ATOM 16 N7 G B2353 -111.250 -61.588 39.645 1.00 0.01 N
ATOM 17 C5 G B2353 -110.816 -60.502 38.917 1.00 0.01 C
ATOM 18 C6 G B2353 -111.221 -60.080 37.650 1.00 0.01 C
ATOM 19 O6 G B2353 -112.063 -60.642 36.943 1.00 0.01 O
ATOM 20 N1 G B2353 -110.542 -58.924 37.269 1.00 0.01 N
ATOM 21 C2 G B2353 -109.603 -58.293 38.047 1.00 0.01 C
ATOM 22 N2 G B2353 -109.053 -57.201 37.546 1.00 0.01 N
ATOM 23 N3 G B2353 -109.219 -58.664 39.234 1.00 0.01 N
ATOM 24 C4 G B2353 -109.869 -59.781 39.585 1.00 0.01 C
ATOM 25 P G B2354 -111.797 -60.327 45.681 1.00 0.01 P
ATOM 26 OP1 G B2354 -111.998 -59.337 46.734 1.00 0.01 O
ATOM 27 OP2 G B2354 -111.982 -61.742 46.011 1.00 0.01 O
ATOM 28 O5' G B2354 -112.674 -59.962 44.413 1.00 0.01 O
TER
ATOM 2 P G A2350 -117.601 -67.483 31.409 1.00 0.01 P
ATOM 3 OP1 G A2350 -117.703 -67.920 30.011 1.00 0.01 O
ATOM 4 OP2 G A2350 -117.632 -68.494 32.471 1.00 0.01 O
ATOM 5 O5' G A2350 -116.337 -66.561 31.589 1.00 0.01 O
ATOM 6 C5' G A2350 -115.196 -67.021 32.289 1.00 0.01 C
ATOM 7 C4' G A2350 -114.661 -65.960 33.203 1.00 0.01 C
ATOM 8 O4' G A2350 -115.602 -65.718 34.272 1.00 0.01 O
ATOM 9 C3' G A2350 -113.384 -66.289 33.944 1.00 0.01 C
ATOM 10 O3' G A2350 -112.226 -66.254 33.130 1.00 0.01 O
ATOM 11 C2' G A2350 -113.405 -65.266 35.079 1.00 0.01 C
ATOM 12 O2' G A2350 -112.982 -63.972 34.647 1.00 0.01 O
ATOM 13 C1' G A2350 -114.907 -65.225 35.401 1.00 0.01 C
ATOM 14 N9 G A2350 -115.227 -66.069 36.551 1.00 0.18 N
ATOM 15 C8 G A2350 -116.021 -67.169 36.632 1.00 0.18 C
ATOM 16 N7 G A2350 -116.064 -67.679 37.837 1.00 0.18 N
ATOM 17 C5 G A2350 -115.225 -66.867 38.541 1.00 0.18 C
ATOM 18 C6 G A2350 -114.863 -66.938 39.872 1.00 0.18 C
ATOM 19 O6 G A2350 -115.226 -67.763 40.699 1.00 0.18 O
ATOM 20 N1 G A2350 -113.991 -65.925 40.223 1.00 0.18 N
ATOM 21 C2 G A2350 -113.515 -64.973 39.369 1.00 0.18 C
ATOM 22 N2 G A2350 -112.682 -64.075 39.908 1.00 0.18 N
ATOM 23 N3 G A2350 -113.843 -64.903 38.095 1.00 0.18 N
ATOM 24 C4 G A2350 -114.699 -65.878 37.777 1.00 0.18 C
ATOM 25 P A A2351 -111.603 -67.627 32.592 1.00 0.01 P
ATOM 26 OP1 A A2351 -111.046 -67.366 31.262 1.00 0.01 O
ATOM 27 OP2 A A2351 -112.636 -68.660 32.730 1.00 0.01 O
ATOM 28 O5' A A2351 -110.447 -67.908 33.615 1.00 0.01 O
TER
ATOM 1 O3' C B2352 -109.672 -65.759 42.553 1.00 0.01 O
ATOM 2 P G B2353 -110.641 -64.762 43.303 1.00 0.01 P
ATOM 3 OP1 G B2353 -110.595 -65.101 44.741 1.00 0.01 O
ATOM 4 OP2 G B2353 -111.931 -64.818 42.608 1.00 0.01 O
ATOM 5 O5' G B2353 -109.945 -63.367 43.053 1.00 0.01 O
ATOM 6 C5' G B2353 -109.028 -62.855 43.987 1.00 0.01 C
ATOM 7 C4' G B2353 -108.767 -61.404 43.750 1.00 0.01 C
ATOM 8 O4' G B2353 -108.273 -61.221 42.405 1.00 0.01 O
ATOM 9 C3' G B2353 -109.979 -60.517 43.830 1.00 0.01 C
ATOM 10 O3' G B2353 -110.300 -60.151 45.147 1.00 0.01 O
ATOM 11 C2' G B2353 -109.619 -59.352 42.909 1.00 0.01 C
ATOM 12 O2' G B2353 -108.776 -58.407 43.527 1.00 0.01 O
ATOM 13 C1' G B2353 -108.828 -60.066 41.834 1.00 0.01 C
ATOM 14 N9 G B2353 -109.702 -60.470 40.743 1.00 0.01 N
ATOM 15 C8 G B2353 -110.563 -61.531 40.741 1.00 0.01 C
ATOM 16 N7 G B2353 -111.250 -61.588 39.645 1.00 0.01 N
ATOM 17 C5 G B2353 -110.816 -60.502 38.917 1.00 0.01 C
ATOM 18 C6 G B2353 -111.221 -60.080 37.650 1.00 0.01 C
ATOM 19 O6 G B2353 -112.063 -60.642 36.943 1.00 0.01 O
ATOM 20 N1 G B2353 -110.542 -58.924 37.269 1.00 0.01 N
ATOM 21 C2 G B2353 -109.603 -58.293 38.047 1.00 0.01 C
ATOM 22 N2 G B2353 -109.053 -57.201 37.546 1.00 0.01 N
ATOM 23 N3 G B2353 -109.219 -58.664 39.234 1.00 0.01 N
ATOM 24 C4 G B2353 -109.869 -59.781 39.585 1.00 0.01 C
ATOM 25 P G B2354 -111.797 -60.327 45.681 1.00 0.01 P
ATOM 26 OP1 G B2354 -111.998 -59.337 46.734 1.00 0.01 O
ATOM 27 OP2 G B2354 -111.982 -61.742 46.011 1.00 0.01 O
ATOM 28 O5' G B2354 -112.674 -59.962 44.413 1.00 0.01 O
TER
Atoms:
OP1: (-117.703,-67.920,30.011)
OP2: (-117.632,-68.494,32.471)
C3': (-113.384,-66.289,33.944)
C1': (-114.907,-65.225,35.401)
C5': (-115.196,-67.021,32.289)
O6: (-115.226,-67.763,40.699)
O4': (-115.602,-65.718,34.272)
C8: (-116.021,-67.169,36.632)
C2: (-113.515,-64.973,39.369)
C6: (-114.863,-66.938,39.872)
C5: (-115.225,-66.867,38.541)
C4: (-114.699,-65.878,37.777)
P: (-117.601,-67.483,31.409)
C4': (-114.661,-65.960,33.203)
C2': (-113.405,-65.266,35.079)
O2': (-112.982,-63.972,34.647)
N1: (-113.991,-65.925,40.223)
N2: (-112.682,-64.075,39.908)
N3: (-113.843,-64.903,38.095)
N7: (-116.064,-67.679,37.837)
N9: (-115.227,-66.069,36.551)
O5': (-116.337,-66.561,31.589)
O3': (-112.226,-66.254,33.130)
OP2: (-117.632,-68.494,32.471)
C3': (-113.384,-66.289,33.944)
C1': (-114.907,-65.225,35.401)
C5': (-115.196,-67.021,32.289)
O6: (-115.226,-67.763,40.699)
O4': (-115.602,-65.718,34.272)
C8: (-116.021,-67.169,36.632)
C2: (-113.515,-64.973,39.369)
C6: (-114.863,-66.938,39.872)
C5: (-115.225,-66.867,38.541)
C4: (-114.699,-65.878,37.777)
P: (-117.601,-67.483,31.409)
C4': (-114.661,-65.960,33.203)
C2': (-113.405,-65.266,35.079)
O2': (-112.982,-63.972,34.647)
N1: (-113.991,-65.925,40.223)
N2: (-112.682,-64.075,39.908)
N3: (-113.843,-64.903,38.095)
N7: (-116.064,-67.679,37.837)
N9: (-115.227,-66.069,36.551)
O5': (-116.337,-66.561,31.589)
O3': (-112.226,-66.254,33.130)
OP1: (-110.595,-65.101,44.741)
OP2: (-111.931,-64.818,42.608)
C3': (-109.979,-60.517,43.830)
C1': (-108.828,-60.066,41.834)
C5': (-109.028,-62.855,43.987)
O6: (-112.063,-60.642,36.943)
O4': (-108.273,-61.221,42.405)
C8: (-110.563,-61.531,40.741)
C2: (-109.603,-58.293,38.047)
C6: (-111.221,-60.080,37.650)
C5: (-110.816,-60.502,38.917)
C4: (-109.869,-59.781,39.585)
P: (-110.641,-64.762,43.303)
C4': (-108.767,-61.404,43.750)
C2': (-109.619,-59.352,42.909)
O2': (-108.776,-58.407,43.527)
N1: (-110.542,-58.924,37.269)
N2: (-109.053,-57.201,37.546)
N3: (-109.219,-58.664,39.234)
N7: (-111.250,-61.588,39.645)
N9: (-109.702,-60.470,40.743)
O5': (-109.945,-63.367,43.053)
O3': (-110.300,-60.151,45.147)
OP2: (-111.931,-64.818,42.608)
C3': (-109.979,-60.517,43.830)
C1': (-108.828,-60.066,41.834)
C5': (-109.028,-62.855,43.987)
O6: (-112.063,-60.642,36.943)
O4': (-108.273,-61.221,42.405)
C8: (-110.563,-61.531,40.741)
C2: (-109.603,-58.293,38.047)
C6: (-111.221,-60.080,37.650)
C5: (-110.816,-60.502,38.917)
C4: (-109.869,-59.781,39.585)
P: (-110.641,-64.762,43.303)
C4': (-108.767,-61.404,43.750)
C2': (-109.619,-59.352,42.909)
O2': (-108.776,-58.407,43.527)
N1: (-110.542,-58.924,37.269)
N2: (-109.053,-57.201,37.546)
N3: (-109.219,-58.664,39.234)
N7: (-111.250,-61.588,39.645)
N9: (-109.702,-60.470,40.743)
O5': (-109.945,-63.367,43.053)
O3': (-110.300,-60.151,45.147)
Image (generated by PyMOL):