ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3I2U:B6:A5

Extra

PDB:
ATOM 1 O3' A A 5 37.950 20.640 66.397 1.00 89.46 O
ATOM 2 P G A 6 38.181 21.578 65.121 1.00 90.21 P
ATOM 3 OP1 G A 6 39.252 22.560 65.429 1.00 90.85 O
ATOM 4 OP2 G A 6 36.831 22.056 64.718 1.00 83.71 O
ATOM 5 O5' G A 6 38.701 20.594 63.977 1.00 91.46 O
ATOM 6 C5' G A 6 39.871 19.771 64.117 1.00 86.64 C
ATOM 7 C4' G A 6 40.041 18.971 62.848 1.00 87.10 C
ATOM 8 O4' G A 6 38.869 18.151 62.676 1.00 86.29 O
ATOM 9 C3' G A 6 40.148 19.895 61.639 1.00 86.88 C
ATOM 10 O3' G A 6 41.473 19.758 61.112 1.00 84.18 O
ATOM 11 C2' G A 6 39.063 19.445 60.656 1.00 88.79 C
ATOM 12 O2' G A 6 39.500 19.112 59.365 1.00 97.83 O
ATOM 13 C1' G A 6 38.424 18.239 61.353 1.00 87.27 C
ATOM 14 N9 G A 6 36.974 18.142 61.331 1.00 85.52 N
ATOM 15 C8 G A 6 36.053 18.931 61.977 1.00 85.48 C
ATOM 16 N7 G A 6 34.821 18.577 61.738 1.00 85.38 N
ATOM 17 C5 G A 6 34.938 17.487 60.884 1.00 84.65 C
ATOM 18 C6 G A 6 33.945 16.686 60.278 1.00 84.73 C
ATOM 19 O6 G A 6 32.716 16.775 60.378 1.00 87.24 O
ATOM 20 N1 G A 6 34.506 15.691 59.485 1.00 83.66 N
ATOM 21 C2 G A 6 35.849 15.492 59.301 1.00 83.80 C
ATOM 22 N2 G A 6 36.196 14.479 58.494 1.00 83.44 N
ATOM 23 N3 G A 6 36.785 16.233 59.863 1.00 84.64 N
ATOM 24 C4 G A 6 36.259 17.208 60.634 1.00 84.89 C
ATOM 25 P A A 7 41.929 20.585 59.812 1.00 83.10 P
ATOM 26 OP1 A A 7 42.929 21.573 60.277 1.00 85.72 O
ATOM 27 OP2 A A 7 40.730 21.053 59.069 1.00 81.82 O
ATOM 28 O5' A A 7 42.689 19.505 58.912 1.00 81.33 O
TER

ATOM 1 P G B 5 33.781 13.671 55.586 1.00 62.13 P
ATOM 2 OP1 G B 5 35.166 13.777 55.086 1.00 69.22 O
ATOM 3 OP2 G B 5 33.540 13.531 57.042 1.00 61.96 O
ATOM 4 O5' G B 5 33.021 12.529 54.761 1.00 62.60 O
ATOM 5 C5' G B 5 32.415 11.390 55.407 1.00 63.04 C
ATOM 6 C4' G B 5 32.500 10.166 54.507 1.00 60.84 C
ATOM 7 O4' G B 5 32.015 10.498 53.193 1.00 62.09 O
ATOM 8 C3' G B 5 33.892 9.551 54.333 1.00 62.83 C
ATOM 9 O3' G B 5 33.821 8.256 54.950 1.00 68.94 O
ATOM 10 C2' G B 5 34.028 9.256 52.825 1.00 62.43 C
ATOM 11 O2' G B 5 34.227 7.890 52.523 1.00 76.53 O
ATOM 12 C1' G B 5 32.666 9.674 52.269 1.00 59.44 C
ATOM 13 N9 G B 5 32.585 10.230 50.923 1.00 57.50 N
ATOM 14 C8 G B 5 31.688 9.846 49.951 1.00 55.35 C
ATOM 15 N7 G B 5 31.876 10.451 48.813 1.00 53.99 N
ATOM 16 C5 G B 5 32.958 11.288 49.046 1.00 53.49 C
ATOM 17 C6 G B 5 33.629 12.164 48.171 1.00 53.13 C
ATOM 18 O6 G B 5 33.421 12.349 46.961 1.00 50.65 O
ATOM 19 N1 G B 5 34.651 12.854 48.822 1.00 52.48 N
ATOM 20 C2 G B 5 34.993 12.694 50.146 1.00 52.32 C
ATOM 21 N2 G B 5 36.004 13.454 50.600 1.00 50.25 N
ATOM 22 N3 G B 5 34.388 11.851 50.966 1.00 52.84 N
ATOM 23 C4 G B 5 33.388 11.185 50.353 1.00 54.57 C
ATOM 24 P U B 6 34.655 7.901 56.278 1.00 71.77 P
ATOM 25 OP1 U B 6 34.387 6.459 56.500 1.00 70.62 O
ATOM 26 OP2 U B 6 34.345 8.876 57.355 1.00 73.90 O
ATOM 27 O5' U B 6 36.182 8.002 55.855 1.00 69.36 O
TER

Atoms:
OP1: (39.252,22.560,65.429)
OP2: (36.831,22.056,64.718)
C3': (40.148,19.895,61.639)
C1': (38.424,18.239,61.353)
C5': (39.871,19.771,64.117)
O6: (32.716,16.775,60.378)
O4': (38.869,18.151,62.676)
C8: (36.053,18.931,61.977)
C2: (35.849,15.492,59.301)
C6: (33.945,16.686,60.278)
C5: (34.938,17.487,60.884)
C4: (36.259,17.208,60.634)
P: (38.181,21.578,65.121)
C4': (40.041,18.971,62.848)
C2': (39.063,19.445,60.656)
O2': (39.500,19.112,59.365)
N1: (34.506,15.691,59.485)
N2: (36.196,14.479,58.494)
N3: (36.785,16.233,59.863)
N7: (34.821,18.577,61.738)
N9: (36.974,18.142,61.331)
O5': (38.701,20.594,63.977)
O3': (41.473,19.758,61.112)
OP1: (35.166,13.777,55.086)
OP2: (33.540,13.531,57.042)
C3': (33.892,9.551,54.333)
C1': (32.666,9.674,52.269)
C5': (32.415,11.390,55.407)
O6: (33.421,12.349,46.961)
O4': (32.015,10.498,53.193)
C8: (31.688,9.846,49.951)
C2: (34.993,12.694,50.146)
C6: (33.629,12.164,48.171)
C5: (32.958,11.288,49.046)
C4: (33.388,11.185,50.353)
P: (33.781,13.671,55.586)
C4': (32.500,10.166,54.507)
C2': (34.028,9.256,52.825)
O2': (34.227,7.890,52.523)
N1: (34.651,12.854,48.822)
N2: (36.004,13.454,50.600)
N3: (34.388,11.851,50.966)
N7: (31.876,10.451,48.813)
N9: (32.585,10.230,50.923)
O5': (33.021,12.529,54.761)
O3': (33.821,8.256,54.950)
Image (generated by PyMOL):
PyMOL image
show in jmol