ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1ASY:S44:S9

Extra

PDB:
ATOM 1 O3' A A 43 25.608 55.691 -33.565 1.00 53.27 O
ATOM 2 P G A 44 25.861 54.098 -33.634 1.00 60.04 P
ATOM 3 OP1 G A 44 26.407 53.674 -34.960 1.00 60.34 O
ATOM 4 OP2 G A 44 24.578 53.425 -33.272 1.00 61.33 O
ATOM 5 O5' G A 44 26.912 53.820 -32.454 1.00 58.83 O
ATOM 6 C5' G A 44 28.279 54.229 -32.626 1.00 53.34 C
ATOM 7 C4' G A 44 29.120 53.951 -31.403 1.00 48.48 C
ATOM 8 O4' G A 44 28.531 54.492 -30.189 1.00 45.02 O
ATOM 9 C3' G A 44 29.246 52.475 -31.127 1.00 47.32 C
ATOM 10 O3' G A 44 30.318 51.963 -31.937 1.00 46.35 O
ATOM 11 C2' G A 44 29.624 52.446 -29.655 1.00 47.61 C
ATOM 12 O2' G A 44 31.012 52.680 -29.465 1.00 52.29 O
ATOM 13 C1' G A 44 28.825 53.615 -29.103 1.00 44.64 C
ATOM 14 N9 G A 44 27.627 53.235 -28.345 1.00 43.19 N
ATOM 15 C8 G A 44 26.365 52.899 -28.785 1.00 43.53 C
ATOM 16 N7 G A 44 25.524 52.650 -27.803 1.00 42.62 N
ATOM 17 C5 G A 44 26.281 52.826 -26.649 1.00 43.75 C
ATOM 18 C6 G A 44 25.945 52.680 -25.288 1.00 47.72 C
ATOM 19 O6 G A 44 24.852 52.373 -24.814 1.00 52.57 O
ATOM 20 N1 G A 44 26.996 52.943 -24.444 1.00 47.10 N
ATOM 21 C2 G A 44 28.237 53.308 -24.857 1.00 47.46 C
ATOM 22 N2 G A 44 29.141 53.527 -23.910 1.00 52.01 N
ATOM 23 N3 G A 44 28.594 53.440 -26.140 1.00 45.78 N
ATOM 24 C4 G A 44 27.564 53.177 -26.976 1.00 43.14 C
ATOM 25 P A A 45 30.129 50.736 -32.962 1.00 45.40 P
ATOM 26 OP1 A A 45 30.823 50.853 -34.280 1.00 42.11 O
ATOM 27 OP2 A A 45 28.678 50.502 -33.100 1.00 50.61 O
ATOM 28 O5' A A 45 30.760 49.581 -32.066 1.00 42.66 O
TER

ATOM 1 O3' A B 8 33.367 51.627 -27.708 1.00 42.79 O
ATOM 2 P G B 9 34.796 52.066 -28.311 1.00 39.74 P
ATOM 3 OP1 G B 9 34.859 52.870 -29.577 1.00 37.73 O
ATOM 4 OP2 G B 9 35.427 50.736 -28.500 1.00 39.05 O
ATOM 5 O5' G B 9 35.532 52.855 -27.131 1.00 35.29 O
ATOM 6 C5' G B 9 36.962 53.118 -27.191 1.00 32.54 C
ATOM 7 C4' G B 9 37.382 53.893 -25.951 1.00 27.48 C
ATOM 8 O4' G B 9 36.352 54.887 -25.701 1.00 29.98 O
ATOM 9 C3' G B 9 37.277 52.987 -24.745 1.00 27.22 C
ATOM 10 O3' G B 9 38.539 52.358 -24.495 1.00 27.06 O
ATOM 11 C2' G B 9 36.983 53.951 -23.617 1.00 26.35 C
ATOM 12 O2' G B 9 38.181 54.507 -23.143 1.00 26.98 O
ATOM 13 C1' G B 9 36.079 54.960 -24.306 1.00 26.46 C
ATOM 14 N9 G B 9 34.649 54.668 -24.073 1.00 24.90 N
ATOM 15 C8 G B 9 33.640 54.434 -24.995 1.00 24.64 C
ATOM 16 N7 G B 9 32.463 54.214 -24.452 1.00 22.89 N
ATOM 17 C5 G B 9 32.736 54.288 -23.083 1.00 22.14 C
ATOM 18 C6 G B 9 31.874 54.127 -21.989 1.00 24.53 C
ATOM 19 O6 G B 9 30.675 53.878 -21.989 1.00 29.37 O
ATOM 20 N1 G B 9 32.526 54.273 -20.792 1.00 23.67 N
ATOM 21 C2 G B 9 33.829 54.551 -20.637 1.00 23.19 C
ATOM 22 N2 G B 9 34.250 54.653 -19.371 1.00 28.03 N
ATOM 23 N3 G B 9 34.670 54.711 -21.653 1.00 21.24 N
ATOM 24 C4 G B 9 34.061 54.565 -22.850 1.00 22.10 C
ATOM 25 P U B 10 38.602 50.867 -23.901 1.00 25.05 P
ATOM 26 OP1 U B 10 39.990 50.312 -23.824 1.00 31.78 O
ATOM 27 OP2 U B 10 37.761 50.078 -24.849 1.00 25.07 O
ATOM 28 O5' U B 10 38.034 50.926 -22.428 1.00 8.04 O
TER

Atoms:
OP1: (26.407,53.674,-34.960)
OP2: (24.578,53.425,-33.272)
C3': (29.246,52.475,-31.127)
C1': (28.825,53.615,-29.103)
C5': (28.279,54.229,-32.626)
O6: (24.852,52.373,-24.814)
O4': (28.531,54.492,-30.189)
C8: (26.365,52.899,-28.785)
C2: (28.237,53.308,-24.857)
C6: (25.945,52.680,-25.288)
C5: (26.281,52.826,-26.649)
C4: (27.564,53.177,-26.976)
P: (25.861,54.098,-33.634)
C4': (29.120,53.951,-31.403)
C2': (29.624,52.446,-29.655)
O2': (31.012,52.680,-29.465)
N1: (26.996,52.943,-24.444)
N2: (29.141,53.527,-23.910)
N3: (28.594,53.440,-26.140)
N7: (25.524,52.650,-27.803)
N9: (27.627,53.235,-28.345)
O5': (26.912,53.820,-32.454)
O3': (30.318,51.963,-31.937)
OP1: (34.859,52.870,-29.577)
OP2: (35.427,50.736,-28.500)
C3': (37.277,52.987,-24.745)
C1': (36.079,54.960,-24.306)
C5': (36.962,53.118,-27.191)
O6: (30.675,53.878,-21.989)
O4': (36.352,54.887,-25.701)
C8: (33.640,54.434,-24.995)
C2: (33.829,54.551,-20.637)
C6: (31.874,54.127,-21.989)
C5: (32.736,54.288,-23.083)
C4: (34.061,54.565,-22.850)
P: (34.796,52.066,-28.311)
C4': (37.382,53.893,-25.951)
C2': (36.983,53.951,-23.617)
O2': (38.181,54.507,-23.143)
N1: (32.526,54.273,-20.792)
N2: (34.250,54.653,-19.371)
N3: (34.670,54.711,-21.653)
N7: (32.463,54.214,-24.452)
N9: (34.649,54.668,-24.073)
O5': (35.532,52.855,-27.131)
O3': (38.539,52.358,-24.495)
Image (generated by PyMOL):
PyMOL image
show in jmol