ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1I9V:A44:A9

Extra

PDB:
ATOM 1 O3' A A 43 11.704 -8.556 19.371 1.00 40.87 O
ATOM 2 P G A 44 11.850 -9.286 17.938 1.00 40.12 P
ATOM 3 OP1 G A 44 10.961 -10.470 18.009 1.00 41.23 O
ATOM 4 OP2 G A 44 13.285 -9.467 17.609 1.00 38.81 O
ATOM 5 O5' G A 44 11.186 -8.263 16.932 1.00 37.63 O
ATOM 6 C5' G A 44 9.855 -7.827 17.147 1.00 37.42 C
ATOM 7 C4' G A 44 9.571 -6.636 16.283 1.00 38.24 C
ATOM 8 O4' G A 44 10.299 -5.482 16.783 1.00 38.67 O
ATOM 9 C3' G A 44 10.054 -6.773 14.855 1.00 38.36 C
ATOM 10 O3' G A 44 9.161 -7.563 14.075 1.00 40.28 O
ATOM 11 C2' G A 44 10.188 -5.318 14.411 1.00 39.36 C
ATOM 12 O2' G A 44 8.979 -4.702 13.998 1.00 41.17 O
ATOM 13 C1' G A 44 10.693 -4.652 15.695 1.00 38.22 C
ATOM 14 N9 G A 44 12.146 -4.530 15.724 1.00 36.06 N
ATOM 15 C8 G A 44 13.023 -5.394 16.337 1.00 36.07 C
ATOM 16 N7 G A 44 14.272 -5.047 16.192 1.00 35.79 N
ATOM 17 C5 G A 44 14.216 -3.880 15.441 1.00 35.69 C
ATOM 18 C6 G A 44 15.259 -3.056 14.975 1.00 35.23 C
ATOM 19 O6 G A 44 16.475 -3.187 15.143 1.00 37.39 O
ATOM 20 N1 G A 44 14.777 -1.983 14.252 1.00 33.66 N
ATOM 21 C2 G A 44 13.459 -1.725 14.020 1.00 34.39 C
ATOM 22 N2 G A 44 13.218 -0.607 13.316 1.00 33.76 N
ATOM 23 N3 G A 44 12.460 -2.492 14.449 1.00 34.21 N
ATOM 24 C4 G A 44 12.912 -3.545 15.147 1.00 34.74 C
ATOM 25 P G A 45 9.715 -8.877 13.326 1.00 39.59 P
ATOM 26 OP1 G A 45 8.634 -9.897 13.208 1.00 42.30 O
ATOM 27 OP2 G A 45 10.978 -9.242 14.012 1.00 42.94 O
ATOM 28 O5' G A 45 10.068 -8.377 11.852 1.00 38.41 O
TER

ATOM 1 O3' A B 8 8.466 -2.625 10.272 1.00 28.36 O
ATOM 2 P G B 9 6.892 -3.000 10.275 1.00 30.05 P
ATOM 3 OP1 G B 9 6.495 -3.330 11.670 1.00 29.78 O
ATOM 4 OP2 G B 9 6.659 -3.978 9.183 1.00 32.02 O
ATOM 5 O5' G B 9 6.162 -1.651 9.849 1.00 31.60 O
ATOM 6 C5' G B 9 4.775 -1.452 10.077 1.00 32.07 C
ATOM 7 C4' G B 9 4.556 -0.161 10.834 1.00 33.21 C
ATOM 8 O4' G B 9 5.156 -0.263 12.158 1.00 32.97 O
ATOM 9 C3' G B 9 5.202 1.070 10.220 1.00 34.68 C
ATOM 10 O3' G B 9 4.349 1.640 9.236 1.00 35.52 O
ATOM 11 C2' G B 9 5.372 1.995 11.428 1.00 34.24 C
ATOM 12 O2' G B 9 4.200 2.717 11.752 1.00 34.01 O
ATOM 13 C1' G B 9 5.687 0.992 12.544 1.00 31.78 C
ATOM 14 N9 G B 9 7.109 0.809 12.760 1.00 30.25 N
ATOM 15 C8 G B 9 7.765 -0.378 12.955 1.00 30.86 C
ATOM 16 N7 G B 9 9.052 -0.230 13.125 1.00 31.42 N
ATOM 17 C5 G B 9 9.254 1.140 13.025 1.00 31.37 C
ATOM 18 C6 G B 9 10.444 1.898 13.104 1.00 31.67 C
ATOM 19 O6 G B 9 11.598 1.492 13.277 1.00 33.01 O
ATOM 20 N1 G B 9 10.200 3.262 12.955 1.00 30.66 N
ATOM 21 C2 G B 9 8.968 3.819 12.733 1.00 30.80 C
ATOM 22 N2 G B 9 8.933 5.152 12.596 1.00 30.39 N
ATOM 23 N3 G B 9 7.847 3.118 12.643 1.00 31.68 N
ATOM 24 C4 G B 9 8.063 1.795 12.804 1.00 31.26 C
ATOM 25 P C B 10 4.813 1.688 7.704 1.00 37.07 P
ATOM 26 OP1 C B 10 3.586 1.372 6.909 1.00 35.90 O
ATOM 27 OP2 C B 10 6.014 0.829 7.538 1.00 37.24 O
ATOM 28 O5' C B 10 5.286 3.200 7.520 1.00 34.02 O
TER

Atoms:
OP1: (10.961,-10.470,18.009)
OP2: (13.285,-9.467,17.609)
C3': (10.054,-6.773,14.855)
C1': (10.693,-4.652,15.695)
C5': (9.855,-7.827,17.147)
O6: (16.475,-3.187,15.143)
O4': (10.299,-5.482,16.783)
C8: (13.023,-5.394,16.337)
C2: (13.459,-1.725,14.020)
C6: (15.259,-3.056,14.975)
C5: (14.216,-3.880,15.441)
C4: (12.912,-3.545,15.147)
P: (11.850,-9.286,17.938)
C4': (9.571,-6.636,16.283)
C2': (10.188,-5.318,14.411)
O2': (8.979,-4.702,13.998)
N1: (14.777,-1.983,14.252)
N2: (13.218,-0.607,13.316)
N3: (12.460,-2.492,14.449)
N7: (14.272,-5.047,16.192)
N9: (12.146,-4.530,15.724)
O5': (11.186,-8.263,16.932)
O3': (9.161,-7.563,14.075)
OP1: (6.495,-3.330,11.670)
OP2: (6.659,-3.978,9.183)
C3': (5.202,1.070,10.220)
C1': (5.687,0.992,12.544)
C5': (4.775,-1.452,10.077)
O6: (11.598,1.492,13.277)
O4': (5.156,-0.263,12.158)
C8: (7.765,-0.378,12.955)
C2: (8.968,3.819,12.733)
C6: (10.444,1.898,13.104)
C5: (9.254,1.140,13.025)
C4: (8.063,1.795,12.804)
P: (6.892,-3.000,10.275)
C4': (4.556,-0.161,10.834)
C2': (5.372,1.995,11.428)
O2': (4.200,2.717,11.752)
N1: (10.200,3.262,12.955)
N2: (8.933,5.152,12.596)
N3: (7.847,3.118,12.643)
N7: (9.052,-0.230,13.125)
N9: (7.109,0.809,12.760)
O5': (6.162,-1.651,9.849)
O3': (4.349,1.640,9.236)
Image (generated by PyMOL):
PyMOL image
show in jmol