Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02038:02039
Extra
PDB:
ATOM 1 O3' G A2037 58.508 144.417 109.382 1.00 30.75 O
ATOM 2 P G A2038 58.944 143.351 108.282 1.00 29.15 P
ATOM 3 OP1 G A2038 60.419 143.350 108.211 1.00 29.75 O
ATOM 4 OP2 G A2038 58.154 143.643 107.067 1.00 29.21 O
ATOM 5 O5' G A2038 58.420 141.994 108.920 1.00 27.92 O
ATOM 6 C5' G A2038 58.391 140.778 108.165 1.00 28.14 C
ATOM 7 C4' G A2038 57.220 139.919 108.599 1.00 26.86 C
ATOM 8 O4' G A2038 55.972 140.628 108.347 1.00 29.34 O
ATOM 9 C3' G A2038 57.101 138.600 107.851 1.00 26.05 C
ATOM 10 O3' G A2038 56.438 137.673 108.685 1.00 28.48 O
ATOM 11 C2' G A2038 56.169 138.967 106.705 1.00 26.81 C
ATOM 12 O2' G A2038 55.489 137.867 106.142 1.00 24.45 O
ATOM 13 C1' G A2038 55.192 139.892 107.424 1.00 28.11 C
ATOM 14 N9 G A2038 54.514 140.807 106.514 1.00 28.44 N
ATOM 15 C8 G A2038 55.059 141.858 105.823 1.00 27.51 C
ATOM 16 N7 G A2038 54.212 142.432 105.014 1.00 30.17 N
ATOM 17 C5 G A2038 53.028 141.726 105.195 1.00 31.12 C
ATOM 18 C6 G A2038 51.756 141.868 104.564 1.00 31.36 C
ATOM 19 O6 G A2038 51.417 142.663 103.673 1.00 32.31 O
ATOM 20 N1 G A2038 50.836 140.950 105.056 1.00 28.91 N
ATOM 21 C2 G A2038 51.097 140.008 106.015 1.00 31.48 C
ATOM 22 N2 G A2038 50.074 139.206 106.356 1.00 32.63 N
ATOM 23 N3 G A2038 52.274 139.855 106.600 1.00 31.85 N
ATOM 24 C4 G A2038 53.189 140.741 106.141 1.00 31.19 C
ATOM 25 P G A2039 57.281 136.613 109.536 1.00 31.98 P
ATOM 26 OP1 G A2039 57.869 137.375 110.678 1.00 29.11 O
ATOM 27 OP2 G A2039 58.170 135.864 108.625 1.00 27.83 O
ATOM 28 O5' G A2039 56.150 135.627 110.082 1.00 28.57 O
TER
ATOM 1 O3' G B2038 56.438 137.673 108.685 1.00 28.48 O
ATOM 2 P G B2039 57.281 136.613 109.536 1.00 31.98 P
ATOM 3 OP1 G B2039 57.869 137.375 110.678 1.00 29.11 O
ATOM 4 OP2 G B2039 58.170 135.864 108.625 1.00 27.83 O
ATOM 5 O5' G B2039 56.150 135.627 110.082 1.00 28.57 O
ATOM 6 C5' G B2039 56.467 134.581 111.019 1.00 28.55 C
ATOM 7 C4' G B2039 55.254 133.702 111.275 1.00 28.10 C
ATOM 8 O4' G B2039 54.144 134.506 111.764 1.00 27.91 O
ATOM 9 C3' G B2039 54.653 132.978 110.085 1.00 24.97 C
ATOM 10 O3' G B2039 55.382 131.818 109.744 1.00 25.54 O
ATOM 11 C2' G B2039 53.266 132.642 110.602 1.00 26.75 C
ATOM 12 O2' G B2039 53.258 131.565 111.517 1.00 26.87 O
ATOM 13 C1' G B2039 52.916 133.935 111.338 1.00 26.50 C
ATOM 14 N9 G B2039 52.256 134.879 110.439 1.00 27.88 N
ATOM 15 C8 G B2039 52.769 136.051 109.929 1.00 26.42 C
ATOM 16 N7 G B2039 51.950 136.657 109.116 1.00 25.54 N
ATOM 17 C5 G B2039 50.825 135.843 109.090 1.00 28.06 C
ATOM 18 C6 G B2039 49.613 135.980 108.380 1.00 29.35 C
ATOM 19 O6 G B2039 49.272 136.884 107.609 1.00 34.31 O
ATOM 20 N1 G B2039 48.748 134.924 108.638 1.00 29.07 N
ATOM 21 C2 G B2039 49.010 133.870 109.477 1.00 28.90 C
ATOM 22 N2 G B2039 48.045 132.938 109.596 1.00 27.58 N
ATOM 23 N3 G B2039 50.133 133.736 110.150 1.00 28.55 N
ATOM 24 C4 G B2039 50.992 134.749 109.909 1.00 27.46 C
ATOM 25 P G B2040 55.493 131.381 108.208 1.00 25.02 P
ATOM 26 OP1 G B2040 56.502 130.295 108.136 1.00 22.46 O
ATOM 27 OP2 G B2040 55.668 132.600 107.377 1.00 24.80 O
ATOM 28 O5' G B2040 54.046 130.811 107.877 1.00 25.41 O
TER
ATOM 2 P G A2038 58.944 143.351 108.282 1.00 29.15 P
ATOM 3 OP1 G A2038 60.419 143.350 108.211 1.00 29.75 O
ATOM 4 OP2 G A2038 58.154 143.643 107.067 1.00 29.21 O
ATOM 5 O5' G A2038 58.420 141.994 108.920 1.00 27.92 O
ATOM 6 C5' G A2038 58.391 140.778 108.165 1.00 28.14 C
ATOM 7 C4' G A2038 57.220 139.919 108.599 1.00 26.86 C
ATOM 8 O4' G A2038 55.972 140.628 108.347 1.00 29.34 O
ATOM 9 C3' G A2038 57.101 138.600 107.851 1.00 26.05 C
ATOM 10 O3' G A2038 56.438 137.673 108.685 1.00 28.48 O
ATOM 11 C2' G A2038 56.169 138.967 106.705 1.00 26.81 C
ATOM 12 O2' G A2038 55.489 137.867 106.142 1.00 24.45 O
ATOM 13 C1' G A2038 55.192 139.892 107.424 1.00 28.11 C
ATOM 14 N9 G A2038 54.514 140.807 106.514 1.00 28.44 N
ATOM 15 C8 G A2038 55.059 141.858 105.823 1.00 27.51 C
ATOM 16 N7 G A2038 54.212 142.432 105.014 1.00 30.17 N
ATOM 17 C5 G A2038 53.028 141.726 105.195 1.00 31.12 C
ATOM 18 C6 G A2038 51.756 141.868 104.564 1.00 31.36 C
ATOM 19 O6 G A2038 51.417 142.663 103.673 1.00 32.31 O
ATOM 20 N1 G A2038 50.836 140.950 105.056 1.00 28.91 N
ATOM 21 C2 G A2038 51.097 140.008 106.015 1.00 31.48 C
ATOM 22 N2 G A2038 50.074 139.206 106.356 1.00 32.63 N
ATOM 23 N3 G A2038 52.274 139.855 106.600 1.00 31.85 N
ATOM 24 C4 G A2038 53.189 140.741 106.141 1.00 31.19 C
ATOM 25 P G A2039 57.281 136.613 109.536 1.00 31.98 P
ATOM 26 OP1 G A2039 57.869 137.375 110.678 1.00 29.11 O
ATOM 27 OP2 G A2039 58.170 135.864 108.625 1.00 27.83 O
ATOM 28 O5' G A2039 56.150 135.627 110.082 1.00 28.57 O
TER
ATOM 1 O3' G B2038 56.438 137.673 108.685 1.00 28.48 O
ATOM 2 P G B2039 57.281 136.613 109.536 1.00 31.98 P
ATOM 3 OP1 G B2039 57.869 137.375 110.678 1.00 29.11 O
ATOM 4 OP2 G B2039 58.170 135.864 108.625 1.00 27.83 O
ATOM 5 O5' G B2039 56.150 135.627 110.082 1.00 28.57 O
ATOM 6 C5' G B2039 56.467 134.581 111.019 1.00 28.55 C
ATOM 7 C4' G B2039 55.254 133.702 111.275 1.00 28.10 C
ATOM 8 O4' G B2039 54.144 134.506 111.764 1.00 27.91 O
ATOM 9 C3' G B2039 54.653 132.978 110.085 1.00 24.97 C
ATOM 10 O3' G B2039 55.382 131.818 109.744 1.00 25.54 O
ATOM 11 C2' G B2039 53.266 132.642 110.602 1.00 26.75 C
ATOM 12 O2' G B2039 53.258 131.565 111.517 1.00 26.87 O
ATOM 13 C1' G B2039 52.916 133.935 111.338 1.00 26.50 C
ATOM 14 N9 G B2039 52.256 134.879 110.439 1.00 27.88 N
ATOM 15 C8 G B2039 52.769 136.051 109.929 1.00 26.42 C
ATOM 16 N7 G B2039 51.950 136.657 109.116 1.00 25.54 N
ATOM 17 C5 G B2039 50.825 135.843 109.090 1.00 28.06 C
ATOM 18 C6 G B2039 49.613 135.980 108.380 1.00 29.35 C
ATOM 19 O6 G B2039 49.272 136.884 107.609 1.00 34.31 O
ATOM 20 N1 G B2039 48.748 134.924 108.638 1.00 29.07 N
ATOM 21 C2 G B2039 49.010 133.870 109.477 1.00 28.90 C
ATOM 22 N2 G B2039 48.045 132.938 109.596 1.00 27.58 N
ATOM 23 N3 G B2039 50.133 133.736 110.150 1.00 28.55 N
ATOM 24 C4 G B2039 50.992 134.749 109.909 1.00 27.46 C
ATOM 25 P G B2040 55.493 131.381 108.208 1.00 25.02 P
ATOM 26 OP1 G B2040 56.502 130.295 108.136 1.00 22.46 O
ATOM 27 OP2 G B2040 55.668 132.600 107.377 1.00 24.80 O
ATOM 28 O5' G B2040 54.046 130.811 107.877 1.00 25.41 O
TER
Atoms:
OP1: (60.419,143.350,108.211)
OP2: (58.154,143.643,107.067)
C3': (57.101,138.600,107.851)
C1': (55.192,139.892,107.424)
C5': (58.391,140.778,108.165)
O6: (51.417,142.663,103.673)
O4': (55.972,140.628,108.347)
C8: (55.059,141.858,105.823)
C2: (51.097,140.008,106.015)
C6: (51.756,141.868,104.564)
C5: (53.028,141.726,105.195)
C4: (53.189,140.741,106.141)
P: (58.944,143.351,108.282)
C4': (57.220,139.919,108.599)
C2': (56.169,138.967,106.705)
O2': (55.489,137.867,106.142)
N1: (50.836,140.950,105.056)
N2: (50.074,139.206,106.356)
N3: (52.274,139.855,106.600)
N7: (54.212,142.432,105.014)
N9: (54.514,140.807,106.514)
O5': (58.420,141.994,108.920)
O3': (56.438,137.673,108.685)
OP2: (58.154,143.643,107.067)
C3': (57.101,138.600,107.851)
C1': (55.192,139.892,107.424)
C5': (58.391,140.778,108.165)
O6: (51.417,142.663,103.673)
O4': (55.972,140.628,108.347)
C8: (55.059,141.858,105.823)
C2: (51.097,140.008,106.015)
C6: (51.756,141.868,104.564)
C5: (53.028,141.726,105.195)
C4: (53.189,140.741,106.141)
P: (58.944,143.351,108.282)
C4': (57.220,139.919,108.599)
C2': (56.169,138.967,106.705)
O2': (55.489,137.867,106.142)
N1: (50.836,140.950,105.056)
N2: (50.074,139.206,106.356)
N3: (52.274,139.855,106.600)
N7: (54.212,142.432,105.014)
N9: (54.514,140.807,106.514)
O5': (58.420,141.994,108.920)
O3': (56.438,137.673,108.685)
OP1: (57.869,137.375,110.678)
OP2: (58.170,135.864,108.625)
C3': (54.653,132.978,110.085)
C1': (52.916,133.935,111.338)
C5': (56.467,134.581,111.019)
O6: (49.272,136.884,107.609)
O4': (54.144,134.506,111.764)
C8: (52.769,136.051,109.929)
C2: (49.010,133.870,109.477)
C6: (49.613,135.980,108.380)
C5: (50.825,135.843,109.090)
C4: (50.992,134.749,109.909)
P: (57.281,136.613,109.536)
C4': (55.254,133.702,111.275)
C2': (53.266,132.642,110.602)
O2': (53.258,131.565,111.517)
N1: (48.748,134.924,108.638)
N2: (48.045,132.938,109.596)
N3: (50.133,133.736,110.150)
N7: (51.950,136.657,109.116)
N9: (52.256,134.879,110.439)
O5': (56.150,135.627,110.082)
O3': (55.382,131.818,109.744)
OP2: (58.170,135.864,108.625)
C3': (54.653,132.978,110.085)
C1': (52.916,133.935,111.338)
C5': (56.467,134.581,111.019)
O6: (49.272,136.884,107.609)
O4': (54.144,134.506,111.764)
C8: (52.769,136.051,109.929)
C2: (49.010,133.870,109.477)
C6: (49.613,135.980,108.380)
C5: (50.825,135.843,109.090)
C4: (50.992,134.749,109.909)
P: (57.281,136.613,109.536)
C4': (55.254,133.702,111.275)
C2': (53.266,132.642,110.602)
O2': (53.258,131.565,111.517)
N1: (48.748,134.924,108.638)
N2: (48.045,132.938,109.596)
N3: (50.133,133.736,110.150)
N7: (51.950,136.657,109.116)
N9: (52.256,134.879,110.439)
O5': (56.150,135.627,110.082)
O3': (55.382,131.818,109.744)
Image (generated by PyMOL):