ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1E:A553:A554

Extra

PDB:
ATOM 1 O3' A A 552 -19.123 94.740 81.332 1.00 65.04 O
ATOM 2 P G A 553 -19.065 96.289 80.981 1.00 58.64 P
ATOM 3 OP1 G A 553 -17.944 96.848 81.774 1.00 51.56 O
ATOM 4 OP2 G A 553 -20.442 96.839 81.115 1.00 56.53 O
ATOM 5 O5' G A 553 -18.765 96.291 79.403 1.00 61.27 O
ATOM 6 C5' G A 553 -17.515 95.875 78.888 1.00 64.10 C
ATOM 7 C4' G A 553 -16.483 96.963 79.117 1.00 64.51 C
ATOM 8 O4' G A 553 -15.178 96.451 78.769 1.00 60.89 O
ATOM 9 C3' G A 553 -16.675 98.224 78.280 1.00 59.77 C
ATOM 10 O3' G A 553 -16.135 99.384 78.925 1.00 51.23 O
ATOM 11 C2' G A 553 -15.871 97.901 77.026 1.00 62.56 C
ATOM 12 O2' G A 553 -15.315 99.057 76.440 1.00 74.75 O
ATOM 13 C1' G A 553 -14.731 97.057 77.574 1.00 60.05 C
ATOM 14 N9 G A 553 -14.314 95.989 76.682 1.00 60.73 N
ATOM 15 C8 G A 553 -15.098 95.280 75.811 1.00 68.07 C
ATOM 16 N7 G A 553 -14.436 94.373 75.147 1.00 74.34 N
ATOM 17 C5 G A 553 -13.133 94.491 75.619 1.00 78.28 C
ATOM 18 C6 G A 553 -11.962 93.776 75.278 1.00 76.74 C
ATOM 19 O6 G A 553 -11.844 92.862 74.455 1.00 80.44 O
ATOM 20 N1 G A 553 -10.848 94.218 75.990 1.00 67.89 N
ATOM 21 C2 G A 553 -10.862 95.221 76.922 1.00 65.44 C
ATOM 22 N2 G A 553 -9.698 95.512 77.514 1.00 63.06 N
ATOM 23 N3 G A 553 -11.949 95.894 77.253 1.00 74.44 N
ATOM 24 C4 G A 553 -13.042 95.480 76.566 1.00 71.20 C
ATOM 25 P G A 554 -16.522 99.889 80.407 1.00 56.48 P
ATOM 26 OP1 G A 554 -18.008 99.942 80.564 1.00 53.36 O
ATOM 27 OP2 G A 554 -15.721 101.119 80.608 1.00 62.39 O
ATOM 28 O5' G A 554 -15.881 98.784 81.382 1.00 61.25 O
TER

ATOM 1 O3' G B 553 -16.135 99.384 78.925 1.00 51.23 O
ATOM 2 P G B 554 -16.522 99.889 80.407 1.00 56.48 P
ATOM 3 OP1 G B 554 -18.008 99.942 80.564 1.00 53.36 O
ATOM 4 OP2 G B 554 -15.721 101.119 80.608 1.00 62.39 O
ATOM 5 O5' G B 554 -15.881 98.784 81.382 1.00 61.25 O
ATOM 6 C5' G B 554 -14.488 98.466 81.334 1.00 64.19 C
ATOM 7 C4' G B 554 -13.861 98.712 82.692 1.00 63.49 C
ATOM 8 O4' G B 554 -12.705 97.859 82.870 1.00 65.24 O
ATOM 9 C3' G B 554 -13.340 100.125 82.862 1.00 61.58 C
ATOM 10 O3' G B 554 -13.197 100.442 84.223 1.00 64.61 O
ATOM 11 C2' G B 554 -11.973 99.974 82.231 1.00 59.70 C
ATOM 12 O2' G B 554 -11.094 101.000 82.627 1.00 70.82 O
ATOM 13 C1' G B 554 -11.535 98.647 82.830 1.00 60.64 C
ATOM 14 N9 G B 554 -10.569 97.993 81.960 1.00 67.21 N
ATOM 15 C8 G B 554 -10.796 97.615 80.664 1.00 76.96 C
ATOM 16 N7 G B 554 -9.769 97.057 80.091 1.00 80.46 N
ATOM 17 C5 G B 554 -8.795 97.072 81.071 1.00 65.16 C
ATOM 18 C6 G B 554 -7.475 96.593 81.014 1.00 63.37 C
ATOM 19 O6 G B 554 -6.903 96.055 80.055 1.00 62.20 O
ATOM 20 N1 G B 554 -6.817 96.793 82.221 1.00 68.16 N
ATOM 21 C2 G B 554 -7.375 97.378 83.332 1.00 69.57 C
ATOM 22 N2 G B 554 -6.580 97.484 84.410 1.00 81.69 N
ATOM 23 N3 G B 554 -8.619 97.831 83.392 1.00 57.14 N
ATOM 24 C4 G B 554 -9.267 97.644 82.227 1.00 60.97 C
ATOM 25 P G B 555 -14.080 101.616 84.871 1.00 48.91 P
ATOM 26 OP1 G B 555 -13.599 101.783 86.270 1.00 48.07 O
ATOM 27 OP2 G B 555 -15.513 101.295 84.601 1.00 39.49 O
ATOM 28 O5' G B 555 -13.706 102.924 84.014 1.00 35.71 O
TER

Atoms:
OP1: (-17.944,96.848,81.774)
OP2: (-20.442,96.839,81.115)
C3': (-16.675,98.224,78.280)
C1': (-14.731,97.057,77.574)
C5': (-17.515,95.875,78.888)
O6: (-11.844,92.862,74.455)
O4': (-15.178,96.451,78.769)
C8: (-15.098,95.280,75.811)
C2: (-10.862,95.221,76.922)
C6: (-11.962,93.776,75.278)
C5: (-13.133,94.491,75.619)
C4: (-13.042,95.480,76.566)
P: (-19.065,96.289,80.981)
C4': (-16.483,96.963,79.117)
C2': (-15.871,97.901,77.026)
O2': (-15.315,99.057,76.440)
N1: (-10.848,94.218,75.990)
N2: (-9.698,95.512,77.514)
N3: (-11.949,95.894,77.253)
N7: (-14.436,94.373,75.147)
N9: (-14.314,95.989,76.682)
O5': (-18.765,96.291,79.403)
O3': (-16.135,99.384,78.925)
OP1: (-18.008,99.942,80.564)
OP2: (-15.721,101.119,80.608)
C3': (-13.340,100.125,82.862)
C1': (-11.535,98.647,82.830)
C5': (-14.488,98.466,81.334)
O6: (-6.903,96.055,80.055)
O4': (-12.705,97.859,82.870)
C8: (-10.796,97.615,80.664)
C2: (-7.375,97.378,83.332)
C6: (-7.475,96.593,81.014)
C5: (-8.795,97.072,81.071)
C4: (-9.267,97.644,82.227)
P: (-16.522,99.889,80.407)
C4': (-13.861,98.712,82.692)
C2': (-11.973,99.974,82.231)
O2': (-11.094,101.000,82.627)
N1: (-6.817,96.793,82.221)
N2: (-6.580,97.484,84.410)
N3: (-8.619,97.831,83.392)
N7: (-9.769,97.057,80.091)
N9: (-10.569,97.993,81.960)
O5': (-15.881,98.784,81.382)
O3': (-13.197,100.442,84.223)
Image (generated by PyMOL):
PyMOL image
show in jmol