ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1G:Z45:Z9

Extra

PDB:
ATOM 1 O3' A A 44 -130.995 14.736 43.116 1.00268.42 O
ATOM 2 P G A 45 -130.253 13.819 44.204 1.00301.22 P
ATOM 3 OP1 G A 45 -131.288 13.224 45.079 1.00265.05 O
ATOM 4 OP2 G A 45 -129.153 14.611 44.800 1.00268.13 O
ATOM 5 O5' G A 45 -129.625 12.638 43.327 1.00261.02 O
ATOM 6 C5' G A 45 -130.452 11.652 42.719 1.00245.02 C
ATOM 7 C4' G A 45 -129.590 10.568 42.098 1.00249.89 C
ATOM 8 O4' G A 45 -129.152 10.970 40.772 1.00245.56 O
ATOM 9 C3' G A 45 -128.296 10.281 42.845 1.00255.61 C
ATOM 10 O3' G A 45 -128.503 9.375 43.923 1.00263.17 O
ATOM 11 C2' G A 45 -127.457 9.687 41.723 1.00252.28 C
ATOM 12 O2' G A 45 -127.913 8.405 41.341 1.00239.15 O
ATOM 13 C1' G A 45 -127.765 10.712 40.637 1.00252.32 C
ATOM 14 N9 G A 45 -127.051 11.979 40.805 1.00255.63 N
ATOM 15 C8 G A 45 -127.586 13.147 41.292 1.00245.82 C
ATOM 16 N7 G A 45 -126.740 14.136 41.348 1.00243.75 N
ATOM 17 C5 G A 45 -125.558 13.592 40.867 1.00252.01 C
ATOM 18 C6 G A 45 -124.291 14.199 40.697 1.00250.17 C
ATOM 19 O6 G A 45 -123.963 15.368 40.947 1.00245.55 O
ATOM 20 N1 G A 45 -123.359 13.303 40.182 1.00247.46 N
ATOM 21 C2 G A 45 -123.621 11.990 39.871 1.00246.60 C
ATOM 22 N2 G A 45 -122.591 11.283 39.385 1.00240.08 N
ATOM 23 N3 G A 45 -124.804 11.408 40.025 1.00244.83 N
ATOM 24 C4 G A 45 -125.728 12.266 40.527 1.00250.93 C
ATOM 25 P G A 46 -128.104 9.856 45.397 1.00282.78 P
ATOM 26 OP1 G A 46 -129.323 9.807 46.232 1.00241.12 O
ATOM 27 OP2 G A 46 -127.369 11.133 45.260 1.00233.74 O
ATOM 28 O5' G A 46 -127.088 8.729 45.915 1.00259.33 O
TER

ATOM 1 O3' G B 8 -124.105 7.265 41.311 1.00226.91 O
ATOM 2 P G B 9 -125.111 6.042 41.111 1.00275.03 P
ATOM 3 OP1 G B 9 -126.373 6.385 41.805 1.00235.67 O
ATOM 4 OP2 G B 9 -124.389 4.804 41.477 1.00247.30 O
ATOM 5 O5' G B 9 -125.345 6.018 39.526 1.00245.63 O
ATOM 6 C5' G B 9 -125.560 4.781 38.845 1.00233.44 C
ATOM 7 C4' G B 9 -124.508 4.537 37.774 1.00238.20 C
ATOM 8 O4' G B 9 -124.566 5.599 36.786 1.00239.56 O
ATOM 9 C3' G B 9 -123.059 4.530 38.244 1.00235.13 C
ATOM 10 O3' G B 9 -122.679 3.245 38.737 1.00246.65 O
ATOM 11 C2' G B 9 -122.324 4.868 36.951 1.00235.61 C
ATOM 12 O2' G B 9 -122.185 3.744 36.103 1.00215.59 O
ATOM 13 C1' G B 9 -123.260 5.906 36.332 1.00239.99 C
ATOM 14 N9 G B 9 -122.942 7.280 36.717 1.00243.41 N
ATOM 15 C8 G B 9 -123.760 8.175 37.366 1.00235.76 C
ATOM 16 N7 G B 9 -123.199 9.332 37.580 1.00235.43 N
ATOM 17 C5 G B 9 -121.924 9.200 37.042 1.00242.41 C
ATOM 18 C6 G B 9 -120.854 10.127 36.975 1.00227.39 C
ATOM 19 O6 G B 9 -120.816 11.292 37.394 1.00215.42 O
ATOM 20 N1 G B 9 -119.736 9.585 36.343 1.00235.49 N
ATOM 21 C2 G B 9 -119.660 8.306 35.840 1.00240.01 C
ATOM 22 N2 G B 9 -118.498 7.956 35.264 1.00228.18 N
ATOM 23 N3 G B 9 -120.655 7.429 35.896 1.00236.51 N
ATOM 24 C4 G B 9 -121.751 7.942 36.508 1.00243.31 C
ATOM 25 P A B 10 -121.535 3.134 39.853 1.00296.04 P
ATOM 26 OP1 A B 10 -121.657 1.821 40.525 1.00256.91 O
ATOM 27 OP2 A B 10 -121.572 4.374 40.660 1.00257.61 O
ATOM 28 O5' A B 10 -120.186 3.161 38.996 1.00261.38 O
TER

Atoms:
OP1: (-131.288,13.224,45.079)
OP2: (-129.153,14.611,44.800)
C3': (-128.296,10.281,42.845)
C1': (-127.765,10.712,40.637)
C5': (-130.452,11.652,42.719)
O6: (-123.963,15.368,40.947)
O4': (-129.152,10.970,40.772)
C8: (-127.586,13.147,41.292)
C2: (-123.621,11.990,39.871)
C6: (-124.291,14.199,40.697)
C5: (-125.558,13.592,40.867)
C4: (-125.728,12.266,40.527)
P: (-130.253,13.819,44.204)
C4': (-129.590,10.568,42.098)
C2': (-127.457,9.687,41.723)
O2': (-127.913,8.405,41.341)
N1: (-123.359,13.303,40.182)
N2: (-122.591,11.283,39.385)
N3: (-124.804,11.408,40.025)
N7: (-126.740,14.136,41.348)
N9: (-127.051,11.979,40.805)
O5': (-129.625,12.638,43.327)
O3': (-128.503,9.375,43.923)
OP1: (-126.373,6.385,41.805)
OP2: (-124.389,4.804,41.477)
C3': (-123.059,4.530,38.244)
C1': (-123.260,5.906,36.332)
C5': (-125.560,4.781,38.845)
O6: (-120.816,11.292,37.394)
O4': (-124.566,5.599,36.786)
C8: (-123.760,8.175,37.366)
C2: (-119.660,8.306,35.840)
C6: (-120.854,10.127,36.975)
C5: (-121.924,9.200,37.042)
C4: (-121.751,7.942,36.508)
P: (-125.111,6.042,41.111)
C4': (-124.508,4.537,37.774)
C2': (-122.324,4.868,36.951)
O2': (-122.185,3.744,36.103)
N1: (-119.736,9.585,36.343)
N2: (-118.498,7.956,35.264)
N3: (-120.655,7.429,35.896)
N7: (-123.199,9.332,37.580)
N9: (-122.942,7.280,36.717)
O5': (-125.345,6.018,39.526)
O3': (-122.679,3.245,38.737)
Image (generated by PyMOL):
PyMOL image
show in jmol