ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KFU:K42:K9

Extra

PDB:
ATOM 1 O3' A A 41 23.046 53.522 97.987 1.00 96.33 O
ATOM 2 P G A 42 23.422 53.323 96.440 1.00162.60 P
ATOM 3 OP1 G A 42 24.625 52.457 96.391 1.00137.03 O
ATOM 4 OP2 G A 42 23.491 54.675 95.831 1.00 73.90 O
ATOM 5 O5' G A 42 22.160 52.533 95.871 1.00124.06 O
ATOM 6 C5' G A 42 21.848 51.230 96.342 1.00 90.86 C
ATOM 7 C4' G A 42 20.361 50.975 96.338 1.00111.26 C
ATOM 8 O4' G A 42 19.665 52.103 96.920 1.00136.52 O
ATOM 9 C3' G A 42 19.714 50.801 94.973 1.00128.68 C
ATOM 10 O3' G A 42 19.869 49.490 94.459 1.00158.34 O
ATOM 11 C2' G A 42 18.257 51.176 95.235 1.00146.35 C
ATOM 12 O2' G A 42 17.540 50.071 95.768 1.00102.49 O
ATOM 13 C1' G A 42 18.392 52.241 96.328 1.00143.48 C
ATOM 14 N9 G A 42 18.258 53.612 95.800 1.00 66.07 N
ATOM 15 C8 G A 42 19.266 54.528 95.621 1.00 76.72 C
ATOM 16 N7 G A 42 18.842 55.668 95.150 1.00 96.50 N
ATOM 17 C5 G A 42 17.469 55.500 95.019 1.00 63.76 C
ATOM 18 C6 G A 42 16.477 56.403 94.553 1.00 98.20 C
ATOM 19 O6 G A 42 16.624 57.565 94.152 1.00102.64 O
ATOM 20 N1 G A 42 15.208 55.830 94.582 1.00 63.01 N
ATOM 21 C2 G A 42 14.932 54.552 95.003 1.00 82.43 C
ATOM 22 N2 G A 42 13.642 54.190 94.951 1.00 61.54 N
ATOM 23 N3 G A 42 15.847 53.697 95.440 1.00 64.02 N
ATOM 24 C4 G A 42 17.089 54.236 95.423 1.00 66.85 C
ATOM 25 P G A 43 21.182 49.089 93.625 1.00124.06 P
ATOM 26 OP1 G A 43 21.886 48.037 94.397 1.00 98.14 O
ATOM 27 OP2 G A 43 21.904 50.345 93.308 1.00 99.98 O
ATOM 28 O5' G A 43 20.570 48.466 92.299 1.00121.05 O
TER

ATOM 1 O3' A B 8 13.607 48.365 93.279 1.00 74.21 O
ATOM 2 P G B 9 14.208 46.907 93.588 1.00 66.65 P
ATOM 3 OP1 G B 9 15.580 47.107 94.121 1.00 75.60 O
ATOM 4 OP2 G B 9 14.030 46.090 92.363 1.00 80.05 O
ATOM 5 O5' G B 9 13.255 46.368 94.745 1.00 69.45 O
ATOM 6 C5' G B 9 12.169 45.493 94.461 1.00 45.79 C
ATOM 7 C4' G B 9 11.129 45.551 95.551 1.00 63.17 C
ATOM 8 O4' G B 9 11.632 46.362 96.647 1.00 74.48 O
ATOM 9 C3' G B 9 9.800 46.195 95.165 1.00 58.57 C
ATOM 10 O3' G B 9 8.886 45.267 94.602 1.00 65.93 O
ATOM 11 C2' G B 9 9.314 46.808 96.472 1.00 65.61 C
ATOM 12 O2' G B 9 8.700 45.822 97.290 1.00 70.63 O
ATOM 13 C1' G B 9 10.628 47.222 97.124 1.00 69.79 C
ATOM 14 N9 G B 9 11.015 48.604 96.783 1.00 60.12 N
ATOM 15 C8 G B 9 12.255 48.967 96.319 1.00 59.20 C
ATOM 16 N7 G B 9 12.373 50.244 96.100 1.00 61.56 N
ATOM 17 C5 G B 9 11.136 50.763 96.445 1.00 61.69 C
ATOM 18 C6 G B 9 10.677 52.104 96.412 1.00 70.62 C
ATOM 19 O6 G B 9 11.289 53.121 96.062 1.00 68.23 O
ATOM 20 N1 G B 9 9.360 52.199 96.845 1.00 58.84 N
ATOM 21 C2 G B 9 8.588 51.143 97.258 1.00 81.77 C
ATOM 22 N2 G B 9 7.340 51.447 97.639 1.00 81.25 N
ATOM 23 N3 G B 9 9.006 49.886 97.292 1.00 69.76 N
ATOM 24 C4 G B 9 10.283 49.766 96.875 1.00 48.88 C
ATOM 25 P C B 10 8.186 45.569 93.187 1.00 75.95 P
ATOM 26 OP1 C B 10 7.500 44.323 92.763 1.00 50.87 O
ATOM 27 OP2 C B 10 9.225 46.149 92.300 1.00 54.47 O
ATOM 28 O5' C B 10 7.108 46.678 93.554 1.00 55.63 O
TER

Atoms:
OP1: (24.625,52.457,96.391)
OP2: (23.491,54.675,95.831)
C3': (19.714,50.801,94.973)
C1': (18.392,52.241,96.328)
C5': (21.848,51.230,96.342)
O6: (16.624,57.565,94.152)
O4': (19.665,52.103,96.920)
C8: (19.266,54.528,95.621)
C2: (14.932,54.552,95.003)
C6: (16.477,56.403,94.553)
C5: (17.469,55.500,95.019)
C4: (17.089,54.236,95.423)
P: (23.422,53.323,96.440)
C4': (20.361,50.975,96.338)
C2': (18.257,51.176,95.235)
O2': (17.540,50.071,95.768)
N1: (15.208,55.830,94.582)
N2: (13.642,54.190,94.951)
N3: (15.847,53.697,95.440)
N7: (18.842,55.668,95.150)
N9: (18.258,53.612,95.800)
O5': (22.160,52.533,95.871)
O3': (19.869,49.490,94.459)
OP1: (15.580,47.107,94.121)
OP2: (14.030,46.090,92.363)
C3': (9.800,46.195,95.165)
C1': (10.628,47.222,97.124)
C5': (12.169,45.493,94.461)
O6: (11.289,53.121,96.062)
O4': (11.632,46.362,96.647)
C8: (12.255,48.967,96.319)
C2: (8.588,51.143,97.258)
C6: (10.677,52.104,96.412)
C5: (11.136,50.763,96.445)
C4: (10.283,49.766,96.875)
P: (14.208,46.907,93.588)
C4': (11.129,45.551,95.551)
C2': (9.314,46.808,96.472)
O2': (8.700,45.822,97.290)
N1: (9.360,52.199,96.845)
N2: (7.340,51.447,97.639)
N3: (9.006,49.886,97.292)
N7: (12.373,50.244,96.100)
N9: (11.015,48.604,96.783)
O5': (13.255,46.368,94.745)
O3': (8.886,45.267,94.602)
Image (generated by PyMOL):
PyMOL image
show in jmol