Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VBZ:B40:B42
Extra
PDB:
ATOM 1 O3' G A 39 50.275 73.587 73.318 1.00 87.84 O
ATOM 2 P G A 40 50.196 71.993 73.176 1.00 87.60 P
ATOM 3 OP1 G A 40 51.397 71.405 73.822 1.00 88.79 O
ATOM 4 OP2 G A 40 49.902 71.687 71.749 1.00 87.93 O
ATOM 5 O5' G A 40 48.919 71.606 74.042 1.00 85.25 O
ATOM 6 C5' G A 40 48.893 71.852 75.438 1.00 82.70 C
ATOM 7 C4' G A 40 47.526 71.554 75.980 1.00 81.86 C
ATOM 8 O4' G A 40 46.571 72.498 75.433 1.00 81.27 O
ATOM 9 C3' G A 40 46.968 70.198 75.589 1.00 81.66 C
ATOM 10 O3' G A 40 47.451 69.159 76.422 1.00 82.01 O
ATOM 11 C2' G A 40 45.461 70.402 75.697 1.00 80.43 C
ATOM 12 O2' G A 40 44.968 70.245 77.010 1.00 80.89 O
ATOM 13 C1' G A 40 45.317 71.856 75.245 1.00 79.33 C
ATOM 14 N9 G A 40 44.992 71.913 73.828 1.00 75.33 N
ATOM 15 C8 G A 40 45.873 72.013 72.783 1.00 74.49 C
ATOM 16 N7 G A 40 45.286 71.995 71.618 1.00 73.03 N
ATOM 17 C5 G A 40 43.938 71.885 71.914 1.00 70.40 C
ATOM 18 C6 G A 40 42.824 71.819 71.062 1.00 68.22 C
ATOM 19 O6 G A 40 42.797 71.857 69.832 1.00 68.08 O
ATOM 20 N1 G A 40 41.641 71.705 71.779 1.00 68.00 N
ATOM 21 C2 G A 40 41.549 71.669 73.145 1.00 67.95 C
ATOM 22 N2 G A 40 40.326 71.548 73.649 1.00 66.87 N
ATOM 23 N3 G A 40 42.584 71.742 73.955 1.00 69.44 N
ATOM 24 C4 G A 40 43.740 71.843 73.275 1.00 72.15 C
ATOM 25 P C A 41 47.974 67.801 75.749 1.00 81.92 P
ATOM 26 OP1 C A 41 48.426 66.879 76.821 1.00 82.51 O
ATOM 27 OP2 C A 41 48.906 68.185 74.658 1.00 81.44 O
ATOM 28 O5' C A 41 46.669 67.184 75.085 1.00 80.70 O
TER
ATOM 1 O3' C B 41 43.664 66.057 78.569 1.00 75.81 O
ATOM 2 P A B 42 44.468 65.471 79.828 1.00 77.64 P
ATOM 3 OP1 A B 42 45.843 66.044 79.846 1.00 76.52 O
ATOM 4 OP2 A B 42 44.282 63.999 79.836 1.00 77.42 O
ATOM 5 O5' A B 42 43.656 66.054 81.064 1.00 77.13 O
ATOM 6 C5' A B 42 44.314 66.598 82.199 1.00 75.07 C
ATOM 7 C4' A B 42 43.426 67.631 82.838 1.00 74.65 C
ATOM 8 O4' A B 42 43.751 68.960 82.358 1.00 75.14 O
ATOM 9 C3' A B 42 41.955 67.454 82.511 1.00 73.89 C
ATOM 10 O3' A B 42 41.344 66.470 83.320 1.00 72.20 O
ATOM 11 C2' A B 42 41.390 68.855 82.701 1.00 74.75 C
ATOM 12 O2' A B 42 41.051 69.161 84.037 1.00 73.81 O
ATOM 13 C1' A B 42 42.563 69.722 82.235 1.00 75.21 C
ATOM 14 N9 A B 42 42.424 70.110 80.833 1.00 76.32 N
ATOM 15 C8 A B 42 43.162 69.675 79.760 1.00 76.23 C
ATOM 16 N7 A B 42 42.801 70.211 78.618 1.00 76.72 N
ATOM 17 C5 A B 42 41.754 71.056 78.964 1.00 76.44 C
ATOM 18 C6 A B 42 40.942 71.912 78.205 1.00 76.24 C
ATOM 19 N6 A B 42 41.060 72.068 76.885 1.00 76.04 N
ATOM 20 N1 A B 42 39.989 72.611 78.856 1.00 76.52 N
ATOM 21 C2 A B 42 39.867 72.450 80.179 1.00 76.38 C
ATOM 22 N3 A B 42 40.568 71.676 81.002 1.00 75.95 N
ATOM 23 C4 A B 42 41.509 70.999 80.324 1.00 76.34 C
ATOM 24 P A B 43 40.099 65.645 82.740 1.00 72.00 P
ATOM 25 OP1 A B 43 39.843 64.470 83.615 1.00 71.80 O
ATOM 26 OP2 A B 43 40.348 65.439 81.285 1.00 71.29 O
ATOM 27 O5' A B 43 38.883 66.662 82.898 1.00 71.20 O
TER
ATOM 2 P G A 40 50.196 71.993 73.176 1.00 87.60 P
ATOM 3 OP1 G A 40 51.397 71.405 73.822 1.00 88.79 O
ATOM 4 OP2 G A 40 49.902 71.687 71.749 1.00 87.93 O
ATOM 5 O5' G A 40 48.919 71.606 74.042 1.00 85.25 O
ATOM 6 C5' G A 40 48.893 71.852 75.438 1.00 82.70 C
ATOM 7 C4' G A 40 47.526 71.554 75.980 1.00 81.86 C
ATOM 8 O4' G A 40 46.571 72.498 75.433 1.00 81.27 O
ATOM 9 C3' G A 40 46.968 70.198 75.589 1.00 81.66 C
ATOM 10 O3' G A 40 47.451 69.159 76.422 1.00 82.01 O
ATOM 11 C2' G A 40 45.461 70.402 75.697 1.00 80.43 C
ATOM 12 O2' G A 40 44.968 70.245 77.010 1.00 80.89 O
ATOM 13 C1' G A 40 45.317 71.856 75.245 1.00 79.33 C
ATOM 14 N9 G A 40 44.992 71.913 73.828 1.00 75.33 N
ATOM 15 C8 G A 40 45.873 72.013 72.783 1.00 74.49 C
ATOM 16 N7 G A 40 45.286 71.995 71.618 1.00 73.03 N
ATOM 17 C5 G A 40 43.938 71.885 71.914 1.00 70.40 C
ATOM 18 C6 G A 40 42.824 71.819 71.062 1.00 68.22 C
ATOM 19 O6 G A 40 42.797 71.857 69.832 1.00 68.08 O
ATOM 20 N1 G A 40 41.641 71.705 71.779 1.00 68.00 N
ATOM 21 C2 G A 40 41.549 71.669 73.145 1.00 67.95 C
ATOM 22 N2 G A 40 40.326 71.548 73.649 1.00 66.87 N
ATOM 23 N3 G A 40 42.584 71.742 73.955 1.00 69.44 N
ATOM 24 C4 G A 40 43.740 71.843 73.275 1.00 72.15 C
ATOM 25 P C A 41 47.974 67.801 75.749 1.00 81.92 P
ATOM 26 OP1 C A 41 48.426 66.879 76.821 1.00 82.51 O
ATOM 27 OP2 C A 41 48.906 68.185 74.658 1.00 81.44 O
ATOM 28 O5' C A 41 46.669 67.184 75.085 1.00 80.70 O
TER
ATOM 1 O3' C B 41 43.664 66.057 78.569 1.00 75.81 O
ATOM 2 P A B 42 44.468 65.471 79.828 1.00 77.64 P
ATOM 3 OP1 A B 42 45.843 66.044 79.846 1.00 76.52 O
ATOM 4 OP2 A B 42 44.282 63.999 79.836 1.00 77.42 O
ATOM 5 O5' A B 42 43.656 66.054 81.064 1.00 77.13 O
ATOM 6 C5' A B 42 44.314 66.598 82.199 1.00 75.07 C
ATOM 7 C4' A B 42 43.426 67.631 82.838 1.00 74.65 C
ATOM 8 O4' A B 42 43.751 68.960 82.358 1.00 75.14 O
ATOM 9 C3' A B 42 41.955 67.454 82.511 1.00 73.89 C
ATOM 10 O3' A B 42 41.344 66.470 83.320 1.00 72.20 O
ATOM 11 C2' A B 42 41.390 68.855 82.701 1.00 74.75 C
ATOM 12 O2' A B 42 41.051 69.161 84.037 1.00 73.81 O
ATOM 13 C1' A B 42 42.563 69.722 82.235 1.00 75.21 C
ATOM 14 N9 A B 42 42.424 70.110 80.833 1.00 76.32 N
ATOM 15 C8 A B 42 43.162 69.675 79.760 1.00 76.23 C
ATOM 16 N7 A B 42 42.801 70.211 78.618 1.00 76.72 N
ATOM 17 C5 A B 42 41.754 71.056 78.964 1.00 76.44 C
ATOM 18 C6 A B 42 40.942 71.912 78.205 1.00 76.24 C
ATOM 19 N6 A B 42 41.060 72.068 76.885 1.00 76.04 N
ATOM 20 N1 A B 42 39.989 72.611 78.856 1.00 76.52 N
ATOM 21 C2 A B 42 39.867 72.450 80.179 1.00 76.38 C
ATOM 22 N3 A B 42 40.568 71.676 81.002 1.00 75.95 N
ATOM 23 C4 A B 42 41.509 70.999 80.324 1.00 76.34 C
ATOM 24 P A B 43 40.099 65.645 82.740 1.00 72.00 P
ATOM 25 OP1 A B 43 39.843 64.470 83.615 1.00 71.80 O
ATOM 26 OP2 A B 43 40.348 65.439 81.285 1.00 71.29 O
ATOM 27 O5' A B 43 38.883 66.662 82.898 1.00 71.20 O
TER
Atoms:
OP1: (51.397,71.405,73.822)
OP2: (49.902,71.687,71.749)
C3': (46.968,70.198,75.589)
C1': (45.317,71.856,75.245)
C5': (48.893,71.852,75.438)
O6: (42.797,71.857,69.832)
O4': (46.571,72.498,75.433)
C8: (45.873,72.013,72.783)
C2: (41.549,71.669,73.145)
C6: (42.824,71.819,71.062)
C5: (43.938,71.885,71.914)
C4: (43.740,71.843,73.275)
P: (50.196,71.993,73.176)
C4': (47.526,71.554,75.980)
C2': (45.461,70.402,75.697)
O2': (44.968,70.245,77.010)
N1: (41.641,71.705,71.779)
N2: (40.326,71.548,73.649)
N3: (42.584,71.742,73.955)
N7: (45.286,71.995,71.618)
N9: (44.992,71.913,73.828)
O5': (48.919,71.606,74.042)
O3': (47.451,69.159,76.422)
OP2: (49.902,71.687,71.749)
C3': (46.968,70.198,75.589)
C1': (45.317,71.856,75.245)
C5': (48.893,71.852,75.438)
O6: (42.797,71.857,69.832)
O4': (46.571,72.498,75.433)
C8: (45.873,72.013,72.783)
C2: (41.549,71.669,73.145)
C6: (42.824,71.819,71.062)
C5: (43.938,71.885,71.914)
C4: (43.740,71.843,73.275)
P: (50.196,71.993,73.176)
C4': (47.526,71.554,75.980)
C2': (45.461,70.402,75.697)
O2': (44.968,70.245,77.010)
N1: (41.641,71.705,71.779)
N2: (40.326,71.548,73.649)
N3: (42.584,71.742,73.955)
N7: (45.286,71.995,71.618)
N9: (44.992,71.913,73.828)
O5': (48.919,71.606,74.042)
O3': (47.451,69.159,76.422)
OP1: (45.843,66.044,79.846)
OP2: (44.282,63.999,79.836)
C3': (41.955,67.454,82.511)
C1': (42.563,69.722,82.235)
C5': (44.314,66.598,82.199)
O4': (43.751,68.960,82.358)
C8: (43.162,69.675,79.760)
O2': (41.051,69.161,84.037)
C6: (40.942,71.912,78.205)
C5: (41.754,71.056,78.964)
C4: (41.509,70.999,80.324)
P: (44.468,65.471,79.828)
C4': (43.426,67.631,82.838)
C2': (41.390,68.855,82.701)
C2: (39.867,72.450,80.179)
N1: (39.989,72.611,78.856)
N3: (40.568,71.676,81.002)
N6: (41.060,72.068,76.885)
N7: (42.801,70.211,78.618)
N9: (42.424,70.110,80.833)
O5': (43.656,66.054,81.064)
O3': (41.344,66.470,83.320)
OP2: (44.282,63.999,79.836)
C3': (41.955,67.454,82.511)
C1': (42.563,69.722,82.235)
C5': (44.314,66.598,82.199)
O4': (43.751,68.960,82.358)
C8: (43.162,69.675,79.760)
O2': (41.051,69.161,84.037)
C6: (40.942,71.912,78.205)
C5: (41.754,71.056,78.964)
C4: (41.509,70.999,80.324)
P: (44.468,65.471,79.828)
C4': (43.426,67.631,82.838)
C2': (41.390,68.855,82.701)
C2: (39.867,72.450,80.179)
N1: (39.989,72.611,78.856)
N3: (40.568,71.676,81.002)
N6: (41.060,72.068,76.885)
N7: (42.801,70.211,78.618)
N9: (42.424,70.110,80.833)
O5': (43.656,66.054,81.064)
O3': (41.344,66.470,83.320)
Image (generated by PyMOL):