Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DW4:A10:A17
Extra
PDB:
ATOM 1 O3' U A 9 11.284 -2.687 -1.107 1.00 10.88 O
ATOM 2 P A A 10 12.486 -3.087 -2.079 1.00 11.06 P
ATOM 3 OP1 A A 10 12.164 -4.430 -2.615 1.00 11.96 O
ATOM 4 OP2 A A 10 13.765 -2.858 -1.376 1.00 11.62 O
ATOM 5 O5' A A 10 12.413 -2.010 -3.254 1.00 10.29 O
ATOM 6 C5' A A 10 11.332 -2.058 -4.164 1.00 10.44 C
ATOM 7 C4' A A 10 11.446 -0.916 -5.149 1.00 9.71 C
ATOM 8 O4' A A 10 11.303 0.340 -4.447 1.00 9.65 O
ATOM 9 C3' A A 10 12.795 -0.776 -5.838 1.00 9.79 C
ATOM 10 O3' A A 10 12.926 -1.697 -6.905 1.00 10.59 O
ATOM 11 C2' A A 10 12.689 0.649 -6.355 1.00 9.92 C
ATOM 12 O2' A A 10 11.817 0.744 -7.463 1.00 11.53 O
ATOM 13 C1' A A 10 12.047 1.320 -5.150 1.00 9.06 C
ATOM 14 N9 A A 10 12.984 1.969 -4.239 1.00 8.39 N
ATOM 15 C8 A A 10 13.284 1.634 -2.948 1.00 8.62 C
ATOM 16 N7 A A 10 14.155 2.442 -2.391 1.00 8.76 N
ATOM 17 C5 A A 10 14.437 3.367 -3.383 1.00 8.09 C
ATOM 18 C6 A A 10 15.281 4.492 -3.432 1.00 8.46 C
ATOM 19 N6 A A 10 16.034 4.894 -2.406 1.00 9.18 N
ATOM 20 N1 A A 10 15.320 5.193 -4.583 1.00 8.93 N
ATOM 21 C2 A A 10 14.566 4.795 -5.611 1.00 8.77 C
ATOM 22 N3 A A 10 13.737 3.760 -5.685 1.00 8.50 N
ATOM 23 C4 A A 10 13.722 3.086 -4.526 1.00 8.02 C
ATOM 24 P C A 11 14.326 -2.432 -7.139 1.00 11.19 P
ATOM 25 OP1 C A 11 14.221 -3.161 -8.424 1.00 12.67 O
ATOM 26 OP2 C A 11 14.691 -3.168 -5.912 1.00 12.22 O
ATOM 27 O5' C A 11 15.367 -1.225 -7.274 1.00 9.85 O
TER
ATOM 1 O3' G B 16 22.371 9.149 2.587 1.00 9.27 O
ATOM 2 P G B 17 20.955 9.467 3.267 1.00 9.86 P
ATOM 3 OP1 G B 17 20.862 10.938 3.403 1.00 11.33 O
ATOM 4 OP2 G B 17 20.789 8.600 4.457 1.00 10.82 O
ATOM 5 O5' G B 17 19.905 8.951 2.177 1.00 9.36 O
ATOM 6 C5' G B 17 19.864 9.517 0.877 1.00 9.42 C
ATOM 7 C4' G B 17 18.908 8.727 0.001 1.00 8.84 C
ATOM 8 O4' G B 17 19.368 7.358 -0.128 1.00 8.59 O
ATOM 9 C3' G B 17 17.500 8.579 0.554 1.00 8.51 C
ATOM 10 O3' G B 17 16.739 9.759 0.310 1.00 8.78 O
ATOM 11 C2' G B 17 17.017 7.373 -0.245 1.00 8.56 C
ATOM 12 O2' G B 17 16.799 7.672 -1.607 1.00 8.86 O
ATOM 13 C1' G B 17 18.249 6.485 -0.135 1.00 8.39 C
ATOM 14 N9 G B 17 18.283 5.671 1.076 1.00 8.36 N
ATOM 15 C8 G B 17 19.027 5.899 2.210 1.00 8.72 C
ATOM 16 N7 G B 17 18.850 4.999 3.135 1.00 9.30 N
ATOM 17 C5 G B 17 17.931 4.116 2.582 1.00 8.94 C
ATOM 18 C6 G B 17 17.362 2.941 3.129 1.00 9.71 C
ATOM 19 O6 G B 17 17.573 2.437 4.241 1.00 11.02 O
ATOM 20 N1 G B 17 16.471 2.337 2.247 1.00 9.14 N
ATOM 21 C2 G B 17 16.167 2.811 0.994 1.00 8.79 C
ATOM 22 N2 G B 17 15.280 2.089 0.292 1.00 9.25 N
ATOM 23 N3 G B 17 16.693 3.914 0.471 1.00 8.43 N
ATOM 24 C4 G B 17 17.567 4.516 1.316 1.00 8.41 C
ATOM 25 P A B 18 15.458 10.076 1.224 1.00 9.05 P
ATOM 26 OP1 A B 18 15.097 11.494 1.016 1.00 10.25 O
ATOM 27 OP2 A B 18 15.720 9.577 2.592 1.00 10.04 O
ATOM 28 O5' A B 18 14.346 9.110 0.596 1.00 9.01 O
TER
ATOM 2 P A A 10 12.486 -3.087 -2.079 1.00 11.06 P
ATOM 3 OP1 A A 10 12.164 -4.430 -2.615 1.00 11.96 O
ATOM 4 OP2 A A 10 13.765 -2.858 -1.376 1.00 11.62 O
ATOM 5 O5' A A 10 12.413 -2.010 -3.254 1.00 10.29 O
ATOM 6 C5' A A 10 11.332 -2.058 -4.164 1.00 10.44 C
ATOM 7 C4' A A 10 11.446 -0.916 -5.149 1.00 9.71 C
ATOM 8 O4' A A 10 11.303 0.340 -4.447 1.00 9.65 O
ATOM 9 C3' A A 10 12.795 -0.776 -5.838 1.00 9.79 C
ATOM 10 O3' A A 10 12.926 -1.697 -6.905 1.00 10.59 O
ATOM 11 C2' A A 10 12.689 0.649 -6.355 1.00 9.92 C
ATOM 12 O2' A A 10 11.817 0.744 -7.463 1.00 11.53 O
ATOM 13 C1' A A 10 12.047 1.320 -5.150 1.00 9.06 C
ATOM 14 N9 A A 10 12.984 1.969 -4.239 1.00 8.39 N
ATOM 15 C8 A A 10 13.284 1.634 -2.948 1.00 8.62 C
ATOM 16 N7 A A 10 14.155 2.442 -2.391 1.00 8.76 N
ATOM 17 C5 A A 10 14.437 3.367 -3.383 1.00 8.09 C
ATOM 18 C6 A A 10 15.281 4.492 -3.432 1.00 8.46 C
ATOM 19 N6 A A 10 16.034 4.894 -2.406 1.00 9.18 N
ATOM 20 N1 A A 10 15.320 5.193 -4.583 1.00 8.93 N
ATOM 21 C2 A A 10 14.566 4.795 -5.611 1.00 8.77 C
ATOM 22 N3 A A 10 13.737 3.760 -5.685 1.00 8.50 N
ATOM 23 C4 A A 10 13.722 3.086 -4.526 1.00 8.02 C
ATOM 24 P C A 11 14.326 -2.432 -7.139 1.00 11.19 P
ATOM 25 OP1 C A 11 14.221 -3.161 -8.424 1.00 12.67 O
ATOM 26 OP2 C A 11 14.691 -3.168 -5.912 1.00 12.22 O
ATOM 27 O5' C A 11 15.367 -1.225 -7.274 1.00 9.85 O
TER
ATOM 1 O3' G B 16 22.371 9.149 2.587 1.00 9.27 O
ATOM 2 P G B 17 20.955 9.467 3.267 1.00 9.86 P
ATOM 3 OP1 G B 17 20.862 10.938 3.403 1.00 11.33 O
ATOM 4 OP2 G B 17 20.789 8.600 4.457 1.00 10.82 O
ATOM 5 O5' G B 17 19.905 8.951 2.177 1.00 9.36 O
ATOM 6 C5' G B 17 19.864 9.517 0.877 1.00 9.42 C
ATOM 7 C4' G B 17 18.908 8.727 0.001 1.00 8.84 C
ATOM 8 O4' G B 17 19.368 7.358 -0.128 1.00 8.59 O
ATOM 9 C3' G B 17 17.500 8.579 0.554 1.00 8.51 C
ATOM 10 O3' G B 17 16.739 9.759 0.310 1.00 8.78 O
ATOM 11 C2' G B 17 17.017 7.373 -0.245 1.00 8.56 C
ATOM 12 O2' G B 17 16.799 7.672 -1.607 1.00 8.86 O
ATOM 13 C1' G B 17 18.249 6.485 -0.135 1.00 8.39 C
ATOM 14 N9 G B 17 18.283 5.671 1.076 1.00 8.36 N
ATOM 15 C8 G B 17 19.027 5.899 2.210 1.00 8.72 C
ATOM 16 N7 G B 17 18.850 4.999 3.135 1.00 9.30 N
ATOM 17 C5 G B 17 17.931 4.116 2.582 1.00 8.94 C
ATOM 18 C6 G B 17 17.362 2.941 3.129 1.00 9.71 C
ATOM 19 O6 G B 17 17.573 2.437 4.241 1.00 11.02 O
ATOM 20 N1 G B 17 16.471 2.337 2.247 1.00 9.14 N
ATOM 21 C2 G B 17 16.167 2.811 0.994 1.00 8.79 C
ATOM 22 N2 G B 17 15.280 2.089 0.292 1.00 9.25 N
ATOM 23 N3 G B 17 16.693 3.914 0.471 1.00 8.43 N
ATOM 24 C4 G B 17 17.567 4.516 1.316 1.00 8.41 C
ATOM 25 P A B 18 15.458 10.076 1.224 1.00 9.05 P
ATOM 26 OP1 A B 18 15.097 11.494 1.016 1.00 10.25 O
ATOM 27 OP2 A B 18 15.720 9.577 2.592 1.00 10.04 O
ATOM 28 O5' A B 18 14.346 9.110 0.596 1.00 9.01 O
TER
Atoms:
OP1: (12.164,-4.430,-2.615)
OP2: (13.765,-2.858,-1.376)
C3': (12.795,-0.776,-5.838)
C1': (12.047,1.320,-5.150)
C5': (11.332,-2.058,-4.164)
O4': (11.303,0.340,-4.447)
C8: (13.284,1.634,-2.948)
O2': (11.817,0.744,-7.463)
C6: (15.281,4.492,-3.432)
C5: (14.437,3.367,-3.383)
C4: (13.722,3.086,-4.526)
P: (12.486,-3.087,-2.079)
C4': (11.446,-0.916,-5.149)
C2': (12.689,0.649,-6.355)
C2: (14.566,4.795,-5.611)
N1: (15.320,5.193,-4.583)
N3: (13.737,3.760,-5.685)
N6: (16.034,4.894,-2.406)
N7: (14.155,2.442,-2.391)
N9: (12.984,1.969,-4.239)
O5': (12.413,-2.010,-3.254)
O3': (12.926,-1.697,-6.905)
OP2: (13.765,-2.858,-1.376)
C3': (12.795,-0.776,-5.838)
C1': (12.047,1.320,-5.150)
C5': (11.332,-2.058,-4.164)
O4': (11.303,0.340,-4.447)
C8: (13.284,1.634,-2.948)
O2': (11.817,0.744,-7.463)
C6: (15.281,4.492,-3.432)
C5: (14.437,3.367,-3.383)
C4: (13.722,3.086,-4.526)
P: (12.486,-3.087,-2.079)
C4': (11.446,-0.916,-5.149)
C2': (12.689,0.649,-6.355)
C2: (14.566,4.795,-5.611)
N1: (15.320,5.193,-4.583)
N3: (13.737,3.760,-5.685)
N6: (16.034,4.894,-2.406)
N7: (14.155,2.442,-2.391)
N9: (12.984,1.969,-4.239)
O5': (12.413,-2.010,-3.254)
O3': (12.926,-1.697,-6.905)
OP1: (20.862,10.938,3.403)
OP2: (20.789,8.600,4.457)
C3': (17.500,8.579,0.554)
C1': (18.249,6.485,-0.135)
C5': (19.864,9.517,0.877)
O6: (17.573,2.437,4.241)
O4': (19.368,7.358,-0.128)
C8: (19.027,5.899,2.210)
C2: (16.167,2.811,0.994)
C6: (17.362,2.941,3.129)
C5: (17.931,4.116,2.582)
C4: (17.567,4.516,1.316)
P: (20.955,9.467,3.267)
C4': (18.908,8.727,0.001)
C2': (17.017,7.373,-0.245)
O2': (16.799,7.672,-1.607)
N1: (16.471,2.337,2.247)
N2: (15.280,2.089,0.292)
N3: (16.693,3.914,0.471)
N7: (18.850,4.999,3.135)
N9: (18.283,5.671,1.076)
O5': (19.905,8.951,2.177)
O3': (16.739,9.759,0.310)
OP2: (20.789,8.600,4.457)
C3': (17.500,8.579,0.554)
C1': (18.249,6.485,-0.135)
C5': (19.864,9.517,0.877)
O6: (17.573,2.437,4.241)
O4': (19.368,7.358,-0.128)
C8: (19.027,5.899,2.210)
C2: (16.167,2.811,0.994)
C6: (17.362,2.941,3.129)
C5: (17.931,4.116,2.582)
C4: (17.567,4.516,1.316)
P: (20.955,9.467,3.267)
C4': (18.908,8.727,0.001)
C2': (17.017,7.373,-0.245)
O2': (16.799,7.672,-1.607)
N1: (16.471,2.337,2.247)
N2: (15.280,2.089,0.292)
N3: (16.693,3.914,0.471)
N7: (18.850,4.999,3.135)
N9: (18.283,5.671,1.076)
O5': (19.905,8.951,2.177)
O3': (16.739,9.759,0.310)
Image (generated by PyMOL):