ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1E:A361:A363

Extra

PDB:
ATOM 1 O3' C A 360 -19.159 20.841 110.369 1.00 63.12 O
ATOM 2 P G A 361 -17.835 20.473 111.197 1.00 67.65 P
ATOM 3 OP1 G A 361 -18.029 19.079 111.663 1.00 51.29 O
ATOM 4 OP2 G A 361 -17.557 21.556 112.172 1.00 67.01 O
ATOM 5 O5' G A 361 -16.664 20.513 110.105 1.00 54.09 O
ATOM 6 C5' G A 361 -16.442 19.373 109.297 1.00 56.27 C
ATOM 7 C4' G A 361 -15.695 19.726 108.028 1.00 49.43 C
ATOM 8 O4' G A 361 -16.372 20.820 107.351 1.00 55.90 O
ATOM 9 C3' G A 361 -14.279 20.251 108.194 1.00 46.07 C
ATOM 10 O3' G A 361 -13.332 19.220 108.450 1.00 48.37 O
ATOM 11 C2' G A 361 -14.115 20.819 106.795 1.00 54.54 C
ATOM 12 O2' G A 361 -14.116 19.793 105.826 1.00 61.69 O
ATOM 13 C1' G A 361 -15.406 21.627 106.707 1.00 55.22 C
ATOM 14 N9 G A 361 -15.313 22.891 107.423 1.00 54.87 N
ATOM 15 C8 G A 361 -15.983 23.230 108.564 1.00 57.02 C
ATOM 16 N7 G A 361 -15.692 24.423 108.992 1.00 61.88 N
ATOM 17 C5 G A 361 -14.762 24.905 108.083 1.00 59.00 C
ATOM 18 C6 G A 361 -14.086 26.152 108.039 1.00 62.23 C
ATOM 19 O6 G A 361 -14.170 27.117 108.826 1.00 57.48 O
ATOM 20 N1 G A 361 -13.234 26.223 106.939 1.00 55.18 N
ATOM 21 C2 G A 361 -13.052 25.231 106.017 1.00 47.27 C
ATOM 22 N2 G A 361 -12.180 25.500 105.039 1.00 48.62 N
ATOM 23 N3 G A 361 -13.678 24.067 106.055 1.00 53.43 N
ATOM 24 C4 G A 361 -14.518 23.971 107.110 1.00 55.63 C
ATOM 25 P C A 362 -12.760 18.993 109.932 1.00 78.05 P
ATOM 26 OP1 C A 362 -12.213 17.616 110.013 1.00 79.06 O
ATOM 27 OP2 C A 362 -13.807 19.412 110.890 1.00 60.42 O
ATOM 28 O5' C A 362 -11.562 20.058 110.030 1.00 52.54 O
TER

ATOM 1 O3' C B 362 -9.094 18.809 106.054 1.00 83.57 O
ATOM 2 P A B 363 -9.329 17.237 105.929 1.00 61.93 P
ATOM 3 OP1 A B 363 -10.650 16.919 106.531 1.00 48.63 O
ATOM 4 OP2 A B 363 -8.119 16.544 106.424 1.00 36.97 O
ATOM 5 O5' A B 363 -9.388 17.114 104.332 1.00 53.77 O
ATOM 6 C5' A B 363 -9.840 15.942 103.691 1.00 58.29 C
ATOM 7 C4' A B 363 -10.230 16.253 102.256 1.00 49.11 C
ATOM 8 O4' A B 363 -11.627 16.635 102.180 1.00 51.52 O
ATOM 9 C3' A B 363 -9.467 17.413 101.640 1.00 44.96 C
ATOM 10 O3' A B 363 -8.293 16.965 101.008 1.00 42.37 O
ATOM 11 C2' A B 363 -10.442 17.956 100.602 1.00 50.46 C
ATOM 12 O2' A B 363 -10.353 17.289 99.365 1.00 55.68 O
ATOM 13 C1' A B 363 -11.794 17.683 101.242 1.00 54.41 C
ATOM 14 N9 A B 363 -12.278 18.868 101.935 1.00 55.12 N
ATOM 15 C8 A B 363 -12.603 18.988 103.260 1.00 49.61 C
ATOM 16 N7 A B 363 -12.998 20.193 103.590 1.00 40.52 N
ATOM 17 C5 A B 363 -12.923 20.912 102.404 1.00 45.04 C
ATOM 18 C6 A B 363 -13.213 22.253 102.084 1.00 47.50 C
ATOM 19 N6 A B 363 -13.655 23.126 102.986 1.00 51.71 N
ATOM 20 N1 A B 363 -13.030 22.656 100.809 1.00 48.82 N
ATOM 21 C2 A B 363 -12.584 21.763 99.916 1.00 51.07 C
ATOM 22 N3 A B 363 -12.281 20.472 100.090 1.00 47.04 N
ATOM 23 C4 A B 363 -12.476 20.109 101.371 1.00 50.61 C
ATOM 24 P A B 364 -7.077 17.998 100.906 1.00 55.77 P
ATOM 25 OP1 A B 364 -5.854 17.275 100.460 1.00 66.24 O
ATOM 26 OP2 A B 364 -7.092 18.728 102.200 1.00 67.70 O
ATOM 27 O5' A B 364 -7.514 18.997 99.730 1.00 49.21 O
TER

Atoms:
OP1: (-18.029,19.079,111.663)
OP2: (-17.557,21.556,112.172)
C3': (-14.279,20.251,108.194)
C1': (-15.406,21.627,106.707)
C5': (-16.442,19.373,109.297)
O6: (-14.170,27.117,108.826)
O4': (-16.372,20.820,107.351)
C8: (-15.983,23.230,108.564)
C2: (-13.052,25.231,106.017)
C6: (-14.086,26.152,108.039)
C5: (-14.762,24.905,108.083)
C4: (-14.518,23.971,107.110)
P: (-17.835,20.473,111.197)
C4': (-15.695,19.726,108.028)
C2': (-14.115,20.819,106.795)
O2': (-14.116,19.793,105.826)
N1: (-13.234,26.223,106.939)
N2: (-12.180,25.500,105.039)
N3: (-13.678,24.067,106.055)
N7: (-15.692,24.423,108.992)
N9: (-15.313,22.891,107.423)
O5': (-16.664,20.513,110.105)
O3': (-13.332,19.220,108.450)
OP1: (-10.650,16.919,106.531)
OP2: (-8.119,16.544,106.424)
C3': (-9.467,17.413,101.640)
C1': (-11.794,17.683,101.242)
C5': (-9.840,15.942,103.691)
O4': (-11.627,16.635,102.180)
C8: (-12.603,18.988,103.260)
O2': (-10.353,17.289,99.365)
C6: (-13.213,22.253,102.084)
C5: (-12.923,20.912,102.404)
C4: (-12.476,20.109,101.371)
P: (-9.329,17.237,105.929)
C4': (-10.230,16.253,102.256)
C2': (-10.442,17.956,100.602)
C2: (-12.584,21.763,99.916)
N1: (-13.030,22.656,100.809)
N3: (-12.281,20.472,100.090)
N6: (-13.655,23.126,102.986)
N7: (-12.998,20.193,103.590)
N9: (-12.278,18.868,101.935)
O5': (-9.388,17.114,104.332)
O3': (-8.293,16.965,101.008)
Image (generated by PyMOL):
PyMOL image
show in jmol