Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A2480:A1120
Extra
PDB:
ATOM 1 O3' G A2479 -79.652 107.654 166.320 1.00 0.01 O
ATOM 2 P G A2480 -78.475 108.682 166.730 1.00 7.38 P
ATOM 3 OP1 G A2480 -78.774 109.162 168.094 1.00 7.38 O
ATOM 4 OP2 G A2480 -78.342 109.670 165.644 1.00 7.38 O
ATOM 5 O5' G A2480 -77.189 107.765 166.765 1.00 7.38 O
ATOM 6 C5' G A2480 -77.049 106.792 167.770 1.00 7.38 C
ATOM 7 C4' G A2480 -76.117 105.718 167.341 1.00 7.38 C
ATOM 8 O4' G A2480 -76.370 105.371 165.968 1.00 7.38 O
ATOM 9 C3' G A2480 -74.659 106.085 167.335 1.00 7.38 C
ATOM 10 O3' G A2480 -74.101 106.106 168.636 1.00 7.38 O
ATOM 11 C2' G A2480 -74.070 105.014 166.416 1.00 7.38 C
ATOM 12 O2' G A2480 -73.930 103.773 167.097 1.00 7.38 O
ATOM 13 C1' G A2480 -75.182 104.873 165.383 1.00 7.38 C
ATOM 14 N9 G A2480 -74.904 105.626 164.154 1.00 7.39 N
ATOM 15 C8 G A2480 -75.672 106.612 163.618 1.00 7.39 C
ATOM 16 N7 G A2480 -75.185 107.098 162.511 1.00 7.39 N
ATOM 17 C5 G A2480 -74.033 106.372 162.301 1.00 7.39 C
ATOM 18 C6 G A2480 -73.080 106.452 161.254 1.00 7.39 C
ATOM 19 O6 G A2480 -73.071 107.210 160.277 1.00 7.39 O
ATOM 20 N1 G A2480 -72.050 105.536 161.433 1.00 7.39 N
ATOM 21 C2 G A2480 -71.947 104.669 162.473 1.00 7.39 C
ATOM 22 N2 G A2480 -70.863 103.891 162.450 1.00 7.39 N
ATOM 23 N3 G A2480 -72.834 104.583 163.451 1.00 7.39 N
ATOM 24 C4 G A2480 -73.849 105.453 163.305 1.00 7.39 C
ATOM 25 P U A2481 -73.267 107.378 169.149 1.00 0.01 P
ATOM 26 OP1 U A2481 -73.301 107.328 170.650 1.00 0.01 O
ATOM 27 OP2 U A2481 -73.806 108.587 168.449 1.00 0.01 O
ATOM 28 O5' U A2481 -71.799 107.069 168.610 1.00 0.01 O
TER
ATOM 1 O3' A B1119 -76.717 98.489 172.970 1.00 6.47 O
ATOM 2 P A B1120 -75.337 97.648 172.854 1.00 0.14 P
ATOM 3 OP1 A B1120 -75.702 96.272 172.424 1.00 0.14 O
ATOM 4 OP2 A B1120 -74.590 97.827 174.135 1.00 0.14 O
ATOM 5 O5' A B1120 -74.565 98.400 171.675 1.00 0.14 O
ATOM 6 C5' A B1120 -73.528 99.328 171.963 1.00 0.14 C
ATOM 7 C4' A B1120 -72.196 98.830 171.482 1.00 0.14 C
ATOM 8 O4' A B1120 -72.280 98.518 170.072 1.00 0.14 O
ATOM 9 C3' A B1120 -71.058 99.817 171.564 1.00 0.14 C
ATOM 10 O3' A B1120 -70.477 99.882 172.843 1.00 0.14 O
ATOM 11 C2' A B1120 -70.100 99.318 170.494 1.00 0.14 C
ATOM 12 O2' A B1120 -69.355 98.201 170.963 1.00 0.14 O
ATOM 13 C1' A B1120 -71.064 98.838 169.425 1.00 0.14 C
ATOM 14 N9 A B1120 -71.348 99.867 168.412 1.00 0.01 N
ATOM 15 C8 A B1120 -71.719 101.187 168.529 1.00 0.01 C
ATOM 16 N7 A B1120 -71.944 101.770 167.381 1.00 0.01 N
ATOM 17 C5 A B1120 -71.726 100.753 166.475 1.00 0.01 C
ATOM 18 C6 A B1120 -71.802 100.678 165.094 1.00 0.01 C
ATOM 19 N6 A B1120 -72.138 101.693 164.337 1.00 0.01 N
ATOM 20 N1 A B1120 -71.510 99.515 164.490 1.00 0.01 N
ATOM 21 C2 A B1120 -71.166 98.460 165.233 1.00 0.01 C
ATOM 22 N3 A B1120 -71.062 98.392 166.553 1.00 0.01 N
ATOM 23 C4 A B1120 -71.366 99.583 167.097 1.00 0.01 C
ATOM 24 P G B1121 -70.129 101.309 173.469 1.00 7.87 P
ATOM 25 OP1 G B1121 -70.210 101.168 174.940 1.00 7.87 O
ATOM 26 OP2 G B1121 -71.019 102.295 172.784 1.00 7.87 O
ATOM 27 O5' G B1121 -68.622 101.543 173.031 1.00 7.87 O
TER
ATOM 2 P G A2480 -78.475 108.682 166.730 1.00 7.38 P
ATOM 3 OP1 G A2480 -78.774 109.162 168.094 1.00 7.38 O
ATOM 4 OP2 G A2480 -78.342 109.670 165.644 1.00 7.38 O
ATOM 5 O5' G A2480 -77.189 107.765 166.765 1.00 7.38 O
ATOM 6 C5' G A2480 -77.049 106.792 167.770 1.00 7.38 C
ATOM 7 C4' G A2480 -76.117 105.718 167.341 1.00 7.38 C
ATOM 8 O4' G A2480 -76.370 105.371 165.968 1.00 7.38 O
ATOM 9 C3' G A2480 -74.659 106.085 167.335 1.00 7.38 C
ATOM 10 O3' G A2480 -74.101 106.106 168.636 1.00 7.38 O
ATOM 11 C2' G A2480 -74.070 105.014 166.416 1.00 7.38 C
ATOM 12 O2' G A2480 -73.930 103.773 167.097 1.00 7.38 O
ATOM 13 C1' G A2480 -75.182 104.873 165.383 1.00 7.38 C
ATOM 14 N9 G A2480 -74.904 105.626 164.154 1.00 7.39 N
ATOM 15 C8 G A2480 -75.672 106.612 163.618 1.00 7.39 C
ATOM 16 N7 G A2480 -75.185 107.098 162.511 1.00 7.39 N
ATOM 17 C5 G A2480 -74.033 106.372 162.301 1.00 7.39 C
ATOM 18 C6 G A2480 -73.080 106.452 161.254 1.00 7.39 C
ATOM 19 O6 G A2480 -73.071 107.210 160.277 1.00 7.39 O
ATOM 20 N1 G A2480 -72.050 105.536 161.433 1.00 7.39 N
ATOM 21 C2 G A2480 -71.947 104.669 162.473 1.00 7.39 C
ATOM 22 N2 G A2480 -70.863 103.891 162.450 1.00 7.39 N
ATOM 23 N3 G A2480 -72.834 104.583 163.451 1.00 7.39 N
ATOM 24 C4 G A2480 -73.849 105.453 163.305 1.00 7.39 C
ATOM 25 P U A2481 -73.267 107.378 169.149 1.00 0.01 P
ATOM 26 OP1 U A2481 -73.301 107.328 170.650 1.00 0.01 O
ATOM 27 OP2 U A2481 -73.806 108.587 168.449 1.00 0.01 O
ATOM 28 O5' U A2481 -71.799 107.069 168.610 1.00 0.01 O
TER
ATOM 1 O3' A B1119 -76.717 98.489 172.970 1.00 6.47 O
ATOM 2 P A B1120 -75.337 97.648 172.854 1.00 0.14 P
ATOM 3 OP1 A B1120 -75.702 96.272 172.424 1.00 0.14 O
ATOM 4 OP2 A B1120 -74.590 97.827 174.135 1.00 0.14 O
ATOM 5 O5' A B1120 -74.565 98.400 171.675 1.00 0.14 O
ATOM 6 C5' A B1120 -73.528 99.328 171.963 1.00 0.14 C
ATOM 7 C4' A B1120 -72.196 98.830 171.482 1.00 0.14 C
ATOM 8 O4' A B1120 -72.280 98.518 170.072 1.00 0.14 O
ATOM 9 C3' A B1120 -71.058 99.817 171.564 1.00 0.14 C
ATOM 10 O3' A B1120 -70.477 99.882 172.843 1.00 0.14 O
ATOM 11 C2' A B1120 -70.100 99.318 170.494 1.00 0.14 C
ATOM 12 O2' A B1120 -69.355 98.201 170.963 1.00 0.14 O
ATOM 13 C1' A B1120 -71.064 98.838 169.425 1.00 0.14 C
ATOM 14 N9 A B1120 -71.348 99.867 168.412 1.00 0.01 N
ATOM 15 C8 A B1120 -71.719 101.187 168.529 1.00 0.01 C
ATOM 16 N7 A B1120 -71.944 101.770 167.381 1.00 0.01 N
ATOM 17 C5 A B1120 -71.726 100.753 166.475 1.00 0.01 C
ATOM 18 C6 A B1120 -71.802 100.678 165.094 1.00 0.01 C
ATOM 19 N6 A B1120 -72.138 101.693 164.337 1.00 0.01 N
ATOM 20 N1 A B1120 -71.510 99.515 164.490 1.00 0.01 N
ATOM 21 C2 A B1120 -71.166 98.460 165.233 1.00 0.01 C
ATOM 22 N3 A B1120 -71.062 98.392 166.553 1.00 0.01 N
ATOM 23 C4 A B1120 -71.366 99.583 167.097 1.00 0.01 C
ATOM 24 P G B1121 -70.129 101.309 173.469 1.00 7.87 P
ATOM 25 OP1 G B1121 -70.210 101.168 174.940 1.00 7.87 O
ATOM 26 OP2 G B1121 -71.019 102.295 172.784 1.00 7.87 O
ATOM 27 O5' G B1121 -68.622 101.543 173.031 1.00 7.87 O
TER
Atoms:
OP1: (-78.774,109.162,168.094)
OP2: (-78.342,109.670,165.644)
C3': (-74.659,106.085,167.335)
C1': (-75.182,104.873,165.383)
C5': (-77.049,106.792,167.770)
O6: (-73.071,107.210,160.277)
O4': (-76.370,105.371,165.968)
C8: (-75.672,106.612,163.618)
C2: (-71.947,104.669,162.473)
C6: (-73.080,106.452,161.254)
C5: (-74.033,106.372,162.301)
C4: (-73.849,105.453,163.305)
P: (-78.475,108.682,166.730)
C4': (-76.117,105.718,167.341)
C2': (-74.070,105.014,166.416)
O2': (-73.930,103.773,167.097)
N1: (-72.050,105.536,161.433)
N2: (-70.863,103.891,162.450)
N3: (-72.834,104.583,163.451)
N7: (-75.185,107.098,162.511)
N9: (-74.904,105.626,164.154)
O5': (-77.189,107.765,166.765)
O3': (-74.101,106.106,168.636)
OP2: (-78.342,109.670,165.644)
C3': (-74.659,106.085,167.335)
C1': (-75.182,104.873,165.383)
C5': (-77.049,106.792,167.770)
O6: (-73.071,107.210,160.277)
O4': (-76.370,105.371,165.968)
C8: (-75.672,106.612,163.618)
C2: (-71.947,104.669,162.473)
C6: (-73.080,106.452,161.254)
C5: (-74.033,106.372,162.301)
C4: (-73.849,105.453,163.305)
P: (-78.475,108.682,166.730)
C4': (-76.117,105.718,167.341)
C2': (-74.070,105.014,166.416)
O2': (-73.930,103.773,167.097)
N1: (-72.050,105.536,161.433)
N2: (-70.863,103.891,162.450)
N3: (-72.834,104.583,163.451)
N7: (-75.185,107.098,162.511)
N9: (-74.904,105.626,164.154)
O5': (-77.189,107.765,166.765)
O3': (-74.101,106.106,168.636)
OP1: (-75.702,96.272,172.424)
OP2: (-74.590,97.827,174.135)
C3': (-71.058,99.817,171.564)
C1': (-71.064,98.838,169.425)
C5': (-73.528,99.328,171.963)
O4': (-72.280,98.518,170.072)
C8: (-71.719,101.187,168.529)
O2': (-69.355,98.201,170.963)
C6: (-71.802,100.678,165.094)
C5: (-71.726,100.753,166.475)
C4: (-71.366,99.583,167.097)
P: (-75.337,97.648,172.854)
C4': (-72.196,98.830,171.482)
C2': (-70.100,99.318,170.494)
C2: (-71.166,98.460,165.233)
N1: (-71.510,99.515,164.490)
N3: (-71.062,98.392,166.553)
N6: (-72.138,101.693,164.337)
N7: (-71.944,101.770,167.381)
N9: (-71.348,99.867,168.412)
O5': (-74.565,98.400,171.675)
O3': (-70.477,99.882,172.843)
OP2: (-74.590,97.827,174.135)
C3': (-71.058,99.817,171.564)
C1': (-71.064,98.838,169.425)
C5': (-73.528,99.328,171.963)
O4': (-72.280,98.518,170.072)
C8: (-71.719,101.187,168.529)
O2': (-69.355,98.201,170.963)
C6: (-71.802,100.678,165.094)
C5: (-71.726,100.753,166.475)
C4: (-71.366,99.583,167.097)
P: (-75.337,97.648,172.854)
C4': (-72.196,98.830,171.482)
C2': (-70.100,99.318,170.494)
C2: (-71.166,98.460,165.233)
N1: (-71.510,99.515,164.490)
N3: (-71.062,98.392,166.553)
N6: (-72.138,101.693,164.337)
N7: (-71.944,101.770,167.381)
N9: (-71.348,99.867,168.412)
O5': (-74.565,98.400,171.675)
O3': (-70.477,99.882,172.843)
Image (generated by PyMOL):