ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQL:0988:01233

Extra

PDB:
ATOM 1 O3' U A 987 19.063 71.645 71.126 1.00 74.79 O
ATOM 2 P U A 988 17.513 72.029 70.901 1.00 78.01 P
ATOM 3 OP1 U A 988 16.864 72.375 72.192 1.00 77.36 O
ATOM 4 OP2 U A 988 16.938 70.951 70.054 1.00 79.25 O
ATOM 5 O5' U A 988 17.565 73.358 70.021 1.00 78.98 O
ATOM 6 C5' U A 988 17.878 74.627 70.627 1.00 78.81 C
ATOM 7 C4' U A 988 17.460 75.772 69.728 1.00 77.77 C
ATOM 8 O4' U A 988 16.128 75.532 69.191 1.00 79.33 O
ATOM 9 C3' U A 988 17.378 77.110 70.451 1.00 76.95 C
ATOM 10 O3' U A 988 17.648 78.180 69.546 1.00 73.97 O
ATOM 11 C2' U A 988 15.913 77.152 70.865 1.00 77.86 C
ATOM 12 O2' U A 988 15.460 78.458 71.150 1.00 77.49 O
ATOM 13 C1' U A 988 15.249 76.555 69.622 1.00 80.00 C
ATOM 14 N1 U A 988 13.910 75.973 69.828 1.00 82.51 N
ATOM 15 C2 U A 988 12.801 76.786 69.596 1.00 83.38 C
ATOM 16 O2 U A 988 12.885 77.948 69.228 1.00 83.24 O
ATOM 17 N3 U A 988 11.585 76.183 69.812 1.00 85.05 N
ATOM 18 C4 U A 988 11.357 74.880 70.219 1.00 86.01 C
ATOM 19 O4 U A 988 10.195 74.485 70.366 1.00 85.86 O
ATOM 20 C5 U A 988 12.546 74.102 70.432 1.00 85.20 C
ATOM 21 C6 U A 988 13.750 74.660 70.237 1.00 83.68 C
ATOM 22 P U A 989 19.089 78.897 69.549 1.00 72.12 P
ATOM 23 OP1 U A 989 18.891 80.315 69.143 1.00 72.73 O
ATOM 24 OP2 U A 989 20.007 78.027 68.762 1.00 71.89 O
ATOM 25 O5' U A 989 19.567 78.873 71.071 1.00 69.46 O
TER

ATOM 1 O3' C B1232 10.012 79.073 70.799 1.00 56.67 O
ATOM 2 P A B1233 9.475 79.187 69.293 1.00 56.48 P
ATOM 3 OP1 A B1233 9.408 77.804 68.771 1.00 59.00 O
ATOM 4 OP2 A B1233 10.271 80.201 68.567 1.00 57.23 O
ATOM 5 O5' A B1233 7.994 79.742 69.468 1.00 55.60 O
ATOM 6 C5' A B1233 6.970 78.921 70.054 1.00 53.59 C
ATOM 7 C4' A B1233 5.635 79.623 69.997 1.00 54.18 C
ATOM 8 O4' A B1233 5.630 80.773 70.881 1.00 53.91 O
ATOM 9 C3' A B1233 5.248 80.210 68.653 1.00 54.13 C
ATOM 10 O3' A B1233 4.768 79.221 67.760 1.00 53.76 O
ATOM 11 C2' A B1233 4.185 81.227 69.050 1.00 55.08 C
ATOM 12 O2' A B1233 2.937 80.637 69.354 1.00 55.80 O
ATOM 13 C1' A B1233 4.784 81.783 70.342 1.00 54.95 C
ATOM 14 N9 A B1233 5.580 82.993 70.123 1.00 55.99 N
ATOM 15 C8 A B1233 6.940 83.096 69.939 1.00 56.03 C
ATOM 16 N7 A B1233 7.361 84.328 69.779 1.00 56.31 N
ATOM 17 C5 A B1233 6.202 85.088 69.858 1.00 56.61 C
ATOM 18 C6 A B1233 5.972 86.471 69.765 1.00 56.09 C
ATOM 19 N6 A B1233 6.940 87.367 69.569 1.00 56.31 N
ATOM 20 N1 A B1233 4.698 86.907 69.882 1.00 56.52 N
ATOM 21 C2 A B1233 3.727 86.004 70.078 1.00 56.57 C
ATOM 22 N3 A B1233 3.818 84.678 70.185 1.00 56.45 N
ATOM 23 C4 A B1233 5.097 84.279 70.065 1.00 56.29 C
ATOM 24 P C B1234 5.089 79.351 66.194 1.00 55.45 P
ATOM 25 OP1 C B1234 4.472 78.171 65.520 1.00 56.63 O
ATOM 26 OP2 C B1234 6.541 79.603 66.038 1.00 53.57 O
ATOM 27 O5' C B1234 4.283 80.653 65.761 1.00 51.62 O
TER

Atoms:
C4: (11.357,74.880,70.219)
N3: (11.585,76.183,69.812)
OP1: (16.864,72.375,72.192)
OP2: (16.938,70.951,70.054)
C2: (12.801,76.786,69.596)
C1': (15.249,76.555,69.622)
C3': (17.378,77.110,70.451)
O5': (17.565,73.358,70.021)
O4': (16.128,75.532,69.191)
C5': (17.878,74.627,70.627)
P: (17.513,72.029,70.901)
C4': (17.460,75.772,69.728)
C2': (15.913,77.152,70.865)
O2': (15.460,78.458,71.150)
N1: (13.910,75.973,69.828)
O4: (10.195,74.485,70.366)
O2: (12.885,77.948,69.228)
C6: (13.750,74.660,70.237)
C5: (12.546,74.102,70.432)
O3': (17.648,78.180,69.546)
OP1: (9.408,77.804,68.771)
OP2: (10.271,80.201,68.567)
C3': (5.248,80.210,68.653)
C1': (4.784,81.783,70.342)
C5': (6.970,78.921,70.054)
O4': (5.630,80.773,70.881)
C8: (6.940,83.096,69.939)
O2': (2.937,80.637,69.354)
C6: (5.972,86.471,69.765)
C5: (6.202,85.088,69.858)
C4: (5.097,84.279,70.065)
P: (9.475,79.187,69.293)
C4': (5.635,79.623,69.997)
C2': (4.185,81.227,69.050)
C2: (3.727,86.004,70.078)
N1: (4.698,86.907,69.882)
N3: (3.818,84.678,70.185)
N6: (6.940,87.367,69.569)
N7: (7.361,84.328,69.779)
N9: (5.580,82.993,70.123)
O5': (7.994,79.742,69.468)
O3': (4.768,79.221,67.760)
Image (generated by PyMOL):
PyMOL image
show in jmol