Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ8:0578:0556
Extra
PDB:
ATOM 1 O3' U A 577 -11.839 93.040 106.849 1.00 56.89 O
ATOM 2 P A A 578 -11.397 94.419 106.150 1.00 58.05 P
ATOM 3 OP1 A A 578 -12.538 94.973 105.376 1.00 58.40 O
ATOM 4 OP2 A A 578 -10.090 94.199 105.472 1.00 59.22 O
ATOM 5 O5' A A 578 -11.144 95.384 107.385 1.00 56.96 O
ATOM 6 C5' A A 578 -12.236 95.922 108.127 1.00 54.56 C
ATOM 7 C4' A A 578 -11.733 96.977 109.068 1.00 53.70 C
ATOM 8 O4' A A 578 -10.918 96.353 110.095 1.00 54.11 O
ATOM 9 C3' A A 578 -10.781 97.965 108.432 1.00 53.33 C
ATOM 10 O3' A A 578 -11.445 98.951 107.668 1.00 54.79 O
ATOM 11 C2' A A 578 -10.036 98.500 109.644 1.00 54.15 C
ATOM 12 O2' A A 578 -10.797 99.403 110.424 1.00 55.09 O
ATOM 13 C1' A A 578 -9.836 97.211 110.436 1.00 52.77 C
ATOM 14 N9 A A 578 -8.585 96.534 110.084 1.00 50.14 N
ATOM 15 C8 A A 578 -8.431 95.401 109.324 1.00 49.18 C
ATOM 16 N7 A A 578 -7.187 95.013 109.199 1.00 49.80 N
ATOM 17 C5 A A 578 -6.470 95.958 109.922 1.00 48.49 C
ATOM 18 C6 A A 578 -5.094 96.102 110.184 1.00 47.74 C
ATOM 19 N6 A A 578 -4.162 95.253 109.739 1.00 46.17 N
ATOM 20 N1 A A 578 -4.706 97.159 110.934 1.00 47.66 N
ATOM 21 C2 A A 578 -5.646 97.999 111.390 1.00 47.10 C
ATOM 22 N3 A A 578 -6.967 97.961 111.216 1.00 47.23 N
ATOM 23 C4 A A 578 -7.317 96.904 110.464 1.00 47.39 C
ATOM 24 P A A 579 -10.845 99.368 106.233 1.00 53.05 P
ATOM 25 OP1 A A 579 -11.586 100.589 105.805 1.00 54.50 O
ATOM 26 OP2 A A 579 -10.821 98.166 105.346 1.00 52.66 O
ATOM 27 O5' A A 579 -9.345 99.786 106.567 1.00 53.32 O
TER
ATOM 1 O3' U B 555 4.295 92.139 107.985 1.00 40.25 O
ATOM 2 P G B 556 3.780 91.570 109.400 1.00 41.16 P
ATOM 3 OP1 G B 556 4.782 92.004 110.415 1.00 42.74 O
ATOM 4 OP2 G B 556 3.476 90.124 109.237 1.00 38.16 O
ATOM 5 O5' G B 556 2.435 92.378 109.672 1.00 41.28 O
ATOM 6 C5' G B 556 2.473 93.700 110.239 1.00 42.92 C
ATOM 7 C4' G B 556 1.068 94.212 110.457 1.00 45.80 C
ATOM 8 O4' G B 556 0.397 94.362 109.174 1.00 44.90 O
ATOM 9 C3' G B 556 0.144 93.286 111.233 1.00 46.85 C
ATOM 10 O3' G B 556 0.347 93.339 112.639 1.00 48.76 O
ATOM 11 C2' G B 556 -1.229 93.780 110.798 1.00 46.37 C
ATOM 12 O2' G B 556 -1.585 95.002 111.414 1.00 45.13 O
ATOM 13 C1' G B 556 -0.983 94.029 109.310 1.00 45.39 C
ATOM 14 N9 G B 556 -1.246 92.837 108.505 1.00 41.66 N
ATOM 15 C8 G B 556 -0.333 91.884 108.132 1.00 41.98 C
ATOM 16 N7 G B 556 -0.853 90.924 107.417 1.00 41.91 N
ATOM 17 C5 G B 556 -2.195 91.261 107.315 1.00 41.66 C
ATOM 18 C6 G B 556 -3.250 90.594 106.659 1.00 41.59 C
ATOM 19 O6 G B 556 -3.209 89.530 106.028 1.00 43.55 O
ATOM 20 N1 G B 556 -4.451 91.285 106.783 1.00 40.55 N
ATOM 21 C2 G B 556 -4.615 92.467 107.462 1.00 42.85 C
ATOM 22 N2 G B 556 -5.859 92.986 107.462 1.00 42.47 N
ATOM 23 N3 G B 556 -3.633 93.099 108.092 1.00 43.50 N
ATOM 24 C4 G B 556 -2.455 92.443 107.975 1.00 43.07 C
ATOM 25 P A B 557 -0.135 92.102 113.552 1.00 51.93 P
ATOM 26 OP1 A B 557 0.447 92.286 114.909 1.00 52.12 O
ATOM 27 OP2 A B 557 0.091 90.818 112.827 1.00 48.50 O
ATOM 28 O5' A B 557 -1.704 92.338 113.648 1.00 51.71 O
TER
ATOM 2 P A A 578 -11.397 94.419 106.150 1.00 58.05 P
ATOM 3 OP1 A A 578 -12.538 94.973 105.376 1.00 58.40 O
ATOM 4 OP2 A A 578 -10.090 94.199 105.472 1.00 59.22 O
ATOM 5 O5' A A 578 -11.144 95.384 107.385 1.00 56.96 O
ATOM 6 C5' A A 578 -12.236 95.922 108.127 1.00 54.56 C
ATOM 7 C4' A A 578 -11.733 96.977 109.068 1.00 53.70 C
ATOM 8 O4' A A 578 -10.918 96.353 110.095 1.00 54.11 O
ATOM 9 C3' A A 578 -10.781 97.965 108.432 1.00 53.33 C
ATOM 10 O3' A A 578 -11.445 98.951 107.668 1.00 54.79 O
ATOM 11 C2' A A 578 -10.036 98.500 109.644 1.00 54.15 C
ATOM 12 O2' A A 578 -10.797 99.403 110.424 1.00 55.09 O
ATOM 13 C1' A A 578 -9.836 97.211 110.436 1.00 52.77 C
ATOM 14 N9 A A 578 -8.585 96.534 110.084 1.00 50.14 N
ATOM 15 C8 A A 578 -8.431 95.401 109.324 1.00 49.18 C
ATOM 16 N7 A A 578 -7.187 95.013 109.199 1.00 49.80 N
ATOM 17 C5 A A 578 -6.470 95.958 109.922 1.00 48.49 C
ATOM 18 C6 A A 578 -5.094 96.102 110.184 1.00 47.74 C
ATOM 19 N6 A A 578 -4.162 95.253 109.739 1.00 46.17 N
ATOM 20 N1 A A 578 -4.706 97.159 110.934 1.00 47.66 N
ATOM 21 C2 A A 578 -5.646 97.999 111.390 1.00 47.10 C
ATOM 22 N3 A A 578 -6.967 97.961 111.216 1.00 47.23 N
ATOM 23 C4 A A 578 -7.317 96.904 110.464 1.00 47.39 C
ATOM 24 P A A 579 -10.845 99.368 106.233 1.00 53.05 P
ATOM 25 OP1 A A 579 -11.586 100.589 105.805 1.00 54.50 O
ATOM 26 OP2 A A 579 -10.821 98.166 105.346 1.00 52.66 O
ATOM 27 O5' A A 579 -9.345 99.786 106.567 1.00 53.32 O
TER
ATOM 1 O3' U B 555 4.295 92.139 107.985 1.00 40.25 O
ATOM 2 P G B 556 3.780 91.570 109.400 1.00 41.16 P
ATOM 3 OP1 G B 556 4.782 92.004 110.415 1.00 42.74 O
ATOM 4 OP2 G B 556 3.476 90.124 109.237 1.00 38.16 O
ATOM 5 O5' G B 556 2.435 92.378 109.672 1.00 41.28 O
ATOM 6 C5' G B 556 2.473 93.700 110.239 1.00 42.92 C
ATOM 7 C4' G B 556 1.068 94.212 110.457 1.00 45.80 C
ATOM 8 O4' G B 556 0.397 94.362 109.174 1.00 44.90 O
ATOM 9 C3' G B 556 0.144 93.286 111.233 1.00 46.85 C
ATOM 10 O3' G B 556 0.347 93.339 112.639 1.00 48.76 O
ATOM 11 C2' G B 556 -1.229 93.780 110.798 1.00 46.37 C
ATOM 12 O2' G B 556 -1.585 95.002 111.414 1.00 45.13 O
ATOM 13 C1' G B 556 -0.983 94.029 109.310 1.00 45.39 C
ATOM 14 N9 G B 556 -1.246 92.837 108.505 1.00 41.66 N
ATOM 15 C8 G B 556 -0.333 91.884 108.132 1.00 41.98 C
ATOM 16 N7 G B 556 -0.853 90.924 107.417 1.00 41.91 N
ATOM 17 C5 G B 556 -2.195 91.261 107.315 1.00 41.66 C
ATOM 18 C6 G B 556 -3.250 90.594 106.659 1.00 41.59 C
ATOM 19 O6 G B 556 -3.209 89.530 106.028 1.00 43.55 O
ATOM 20 N1 G B 556 -4.451 91.285 106.783 1.00 40.55 N
ATOM 21 C2 G B 556 -4.615 92.467 107.462 1.00 42.85 C
ATOM 22 N2 G B 556 -5.859 92.986 107.462 1.00 42.47 N
ATOM 23 N3 G B 556 -3.633 93.099 108.092 1.00 43.50 N
ATOM 24 C4 G B 556 -2.455 92.443 107.975 1.00 43.07 C
ATOM 25 P A B 557 -0.135 92.102 113.552 1.00 51.93 P
ATOM 26 OP1 A B 557 0.447 92.286 114.909 1.00 52.12 O
ATOM 27 OP2 A B 557 0.091 90.818 112.827 1.00 48.50 O
ATOM 28 O5' A B 557 -1.704 92.338 113.648 1.00 51.71 O
TER
Atoms:
OP1: (-12.538,94.973,105.376)
OP2: (-10.090,94.199,105.472)
C3': (-10.781,97.965,108.432)
C1': (-9.836,97.211,110.436)
C5': (-12.236,95.922,108.127)
O4': (-10.918,96.353,110.095)
C8: (-8.431,95.401,109.324)
O2': (-10.797,99.403,110.424)
C6: (-5.094,96.102,110.184)
C5: (-6.470,95.958,109.922)
C4: (-7.317,96.904,110.464)
P: (-11.397,94.419,106.150)
C4': (-11.733,96.977,109.068)
C2': (-10.036,98.500,109.644)
C2: (-5.646,97.999,111.390)
N1: (-4.706,97.159,110.934)
N3: (-6.967,97.961,111.216)
N6: (-4.162,95.253,109.739)
N7: (-7.187,95.013,109.199)
N9: (-8.585,96.534,110.084)
O5': (-11.144,95.384,107.385)
O3': (-11.445,98.951,107.668)
OP2: (-10.090,94.199,105.472)
C3': (-10.781,97.965,108.432)
C1': (-9.836,97.211,110.436)
C5': (-12.236,95.922,108.127)
O4': (-10.918,96.353,110.095)
C8: (-8.431,95.401,109.324)
O2': (-10.797,99.403,110.424)
C6: (-5.094,96.102,110.184)
C5: (-6.470,95.958,109.922)
C4: (-7.317,96.904,110.464)
P: (-11.397,94.419,106.150)
C4': (-11.733,96.977,109.068)
C2': (-10.036,98.500,109.644)
C2: (-5.646,97.999,111.390)
N1: (-4.706,97.159,110.934)
N3: (-6.967,97.961,111.216)
N6: (-4.162,95.253,109.739)
N7: (-7.187,95.013,109.199)
N9: (-8.585,96.534,110.084)
O5': (-11.144,95.384,107.385)
O3': (-11.445,98.951,107.668)
OP1: (4.782,92.004,110.415)
OP2: (3.476,90.124,109.237)
C3': (0.144,93.286,111.233)
C1': (-0.983,94.029,109.310)
C5': (2.473,93.700,110.239)
O6: (-3.209,89.530,106.028)
O4': (0.397,94.362,109.174)
C8: (-0.333,91.884,108.132)
C2: (-4.615,92.467,107.462)
C6: (-3.250,90.594,106.659)
C5: (-2.195,91.261,107.315)
C4: (-2.455,92.443,107.975)
P: (3.780,91.570,109.400)
C4': (1.068,94.212,110.457)
C2': (-1.229,93.780,110.798)
O2': (-1.585,95.002,111.414)
N1: (-4.451,91.285,106.783)
N2: (-5.859,92.986,107.462)
N3: (-3.633,93.099,108.092)
N7: (-0.853,90.924,107.417)
N9: (-1.246,92.837,108.505)
O5': (2.435,92.378,109.672)
O3': (0.347,93.339,112.639)
OP2: (3.476,90.124,109.237)
C3': (0.144,93.286,111.233)
C1': (-0.983,94.029,109.310)
C5': (2.473,93.700,110.239)
O6: (-3.209,89.530,106.028)
O4': (0.397,94.362,109.174)
C8: (-0.333,91.884,108.132)
C2: (-4.615,92.467,107.462)
C6: (-3.250,90.594,106.659)
C5: (-2.195,91.261,107.315)
C4: (-2.455,92.443,107.975)
P: (3.780,91.570,109.400)
C4': (1.068,94.212,110.457)
C2': (-1.229,93.780,110.798)
O2': (-1.585,95.002,111.414)
N1: (-4.451,91.285,106.783)
N2: (-5.859,92.986,107.462)
N3: (-3.633,93.099,108.092)
N7: (-0.853,90.924,107.417)
N9: (-1.246,92.837,108.505)
O5': (2.435,92.378,109.672)
O3': (0.347,93.339,112.639)
Image (generated by PyMOL):