Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A2308:A2311
Extra
PDB:
ATOM 1 O3' A A2307 -99.116 -46.613 46.809 1.00 1.96 O
ATOM 2 P U A2308 -98.723 -45.413 47.812 1.00 24.32 P
ATOM 3 OP1 U A2308 -98.493 -45.979 49.167 1.00 49.54 O
ATOM 4 OP2 U A2308 -99.701 -44.302 47.635 1.00 49.54 O
ATOM 5 O5' U A2308 -97.322 -44.942 47.236 1.00 16.21 O
ATOM 6 C5' U A2308 -96.126 -45.191 47.948 1.00 16.21 C
ATOM 7 C4' U A2308 -95.424 -43.892 48.187 1.00 16.21 C
ATOM 8 O4' U A2308 -94.767 -43.458 46.974 1.00 16.21 O
ATOM 9 C3' U A2308 -96.363 -42.755 48.535 1.00 16.21 C
ATOM 10 O3' U A2308 -96.682 -42.743 49.905 1.00 16.21 O
ATOM 11 C2' U A2308 -95.568 -41.535 48.111 1.00 16.21 C
ATOM 12 O2' U A2308 -94.586 -41.220 49.072 1.00 16.21 O
ATOM 13 C1' U A2308 -94.870 -42.052 46.855 1.00 16.21 C
ATOM 14 N1 U A2308 -95.618 -41.744 45.628 1.00 12.48 N
ATOM 15 C2 U A2308 -95.213 -40.664 44.884 1.00 12.48 C
ATOM 16 O2 U A2308 -94.269 -39.979 45.185 1.00 12.48 O
ATOM 17 N3 U A2308 -95.961 -40.415 43.769 1.00 12.48 N
ATOM 18 C4 U A2308 -97.058 -41.121 43.333 1.00 12.48 C
ATOM 19 O4 U A2308 -97.681 -40.726 42.342 1.00 12.48 O
ATOM 20 C5 U A2308 -97.410 -42.236 44.151 1.00 12.48 C
ATOM 21 C6 U A2308 -96.695 -42.503 45.242 1.00 12.48 C
ATOM 22 P A A2309 -98.073 -42.120 50.370 1.00 25.77 P
ATOM 23 OP1 A A2309 -98.325 -42.508 51.783 1.00 35.99 O
ATOM 24 OP2 A A2309 -99.094 -42.423 49.335 1.00 35.86 O
ATOM 25 O5' A A2309 -97.801 -40.558 50.327 1.00 19.42 O
TER
ATOM 1 O3' A B2310 -95.432 -35.474 43.259 1.00 29.86 O
ATOM 2 P A B2311 -96.038 -36.511 42.201 1.00 40.89 P
ATOM 3 OP1 A B2311 -97.439 -36.101 41.941 1.00 35.89 O
ATOM 4 OP2 A B2311 -95.753 -37.878 42.705 1.00 35.89 O
ATOM 5 O5' A B2311 -95.169 -36.298 40.877 1.00 15.57 O
ATOM 6 C5' A B2311 -94.761 -34.982 40.451 1.00 15.57 C
ATOM 7 C4' A B2311 -93.557 -35.072 39.537 1.00 15.57 C
ATOM 8 O4' A B2311 -92.422 -35.635 40.246 1.00 15.57 O
ATOM 9 C3' A B2311 -93.732 -35.931 38.298 1.00 15.57 C
ATOM 10 O3' A B2311 -94.297 -35.114 37.282 1.00 15.57 O
ATOM 11 C2' A B2311 -92.299 -36.362 37.971 1.00 15.57 C
ATOM 12 O2' A B2311 -91.576 -35.412 37.211 1.00 15.57 O
ATOM 13 C1' A B2311 -91.654 -36.440 39.361 1.00 15.57 C
ATOM 14 N9 A B2311 -91.541 -37.778 39.956 1.00 0.79 N
ATOM 15 C8 A B2311 -92.548 -38.682 40.186 1.00 0.79 C
ATOM 16 N7 A B2311 -92.161 -39.754 40.835 1.00 0.79 N
ATOM 17 C5 A B2311 -90.811 -39.547 41.030 1.00 0.79 C
ATOM 18 C6 A B2311 -89.852 -40.294 41.688 1.00 0.79 C
ATOM 19 N6 A B2311 -90.124 -41.430 42.329 1.00 0.79 N
ATOM 20 N1 A B2311 -88.590 -39.832 41.692 1.00 0.79 N
ATOM 21 C2 A B2311 -88.335 -38.670 41.088 1.00 0.79 C
ATOM 22 N3 A B2311 -89.164 -37.855 40.456 1.00 0.79 N
ATOM 23 C4 A B2311 -90.405 -38.357 40.463 1.00 0.79 C
ATOM 24 P A B2312 -95.237 -35.754 36.149 1.00 17.94 P
ATOM 25 OP1 A B2312 -96.610 -35.215 36.278 1.00 8.94 O
ATOM 26 OP2 A B2312 -95.037 -37.213 36.131 1.00 8.94 O
ATOM 27 O5' A B2312 -94.645 -35.123 34.826 1.00 1.74 O
TER
ATOM 2 P U A2308 -98.723 -45.413 47.812 1.00 24.32 P
ATOM 3 OP1 U A2308 -98.493 -45.979 49.167 1.00 49.54 O
ATOM 4 OP2 U A2308 -99.701 -44.302 47.635 1.00 49.54 O
ATOM 5 O5' U A2308 -97.322 -44.942 47.236 1.00 16.21 O
ATOM 6 C5' U A2308 -96.126 -45.191 47.948 1.00 16.21 C
ATOM 7 C4' U A2308 -95.424 -43.892 48.187 1.00 16.21 C
ATOM 8 O4' U A2308 -94.767 -43.458 46.974 1.00 16.21 O
ATOM 9 C3' U A2308 -96.363 -42.755 48.535 1.00 16.21 C
ATOM 10 O3' U A2308 -96.682 -42.743 49.905 1.00 16.21 O
ATOM 11 C2' U A2308 -95.568 -41.535 48.111 1.00 16.21 C
ATOM 12 O2' U A2308 -94.586 -41.220 49.072 1.00 16.21 O
ATOM 13 C1' U A2308 -94.870 -42.052 46.855 1.00 16.21 C
ATOM 14 N1 U A2308 -95.618 -41.744 45.628 1.00 12.48 N
ATOM 15 C2 U A2308 -95.213 -40.664 44.884 1.00 12.48 C
ATOM 16 O2 U A2308 -94.269 -39.979 45.185 1.00 12.48 O
ATOM 17 N3 U A2308 -95.961 -40.415 43.769 1.00 12.48 N
ATOM 18 C4 U A2308 -97.058 -41.121 43.333 1.00 12.48 C
ATOM 19 O4 U A2308 -97.681 -40.726 42.342 1.00 12.48 O
ATOM 20 C5 U A2308 -97.410 -42.236 44.151 1.00 12.48 C
ATOM 21 C6 U A2308 -96.695 -42.503 45.242 1.00 12.48 C
ATOM 22 P A A2309 -98.073 -42.120 50.370 1.00 25.77 P
ATOM 23 OP1 A A2309 -98.325 -42.508 51.783 1.00 35.99 O
ATOM 24 OP2 A A2309 -99.094 -42.423 49.335 1.00 35.86 O
ATOM 25 O5' A A2309 -97.801 -40.558 50.327 1.00 19.42 O
TER
ATOM 1 O3' A B2310 -95.432 -35.474 43.259 1.00 29.86 O
ATOM 2 P A B2311 -96.038 -36.511 42.201 1.00 40.89 P
ATOM 3 OP1 A B2311 -97.439 -36.101 41.941 1.00 35.89 O
ATOM 4 OP2 A B2311 -95.753 -37.878 42.705 1.00 35.89 O
ATOM 5 O5' A B2311 -95.169 -36.298 40.877 1.00 15.57 O
ATOM 6 C5' A B2311 -94.761 -34.982 40.451 1.00 15.57 C
ATOM 7 C4' A B2311 -93.557 -35.072 39.537 1.00 15.57 C
ATOM 8 O4' A B2311 -92.422 -35.635 40.246 1.00 15.57 O
ATOM 9 C3' A B2311 -93.732 -35.931 38.298 1.00 15.57 C
ATOM 10 O3' A B2311 -94.297 -35.114 37.282 1.00 15.57 O
ATOM 11 C2' A B2311 -92.299 -36.362 37.971 1.00 15.57 C
ATOM 12 O2' A B2311 -91.576 -35.412 37.211 1.00 15.57 O
ATOM 13 C1' A B2311 -91.654 -36.440 39.361 1.00 15.57 C
ATOM 14 N9 A B2311 -91.541 -37.778 39.956 1.00 0.79 N
ATOM 15 C8 A B2311 -92.548 -38.682 40.186 1.00 0.79 C
ATOM 16 N7 A B2311 -92.161 -39.754 40.835 1.00 0.79 N
ATOM 17 C5 A B2311 -90.811 -39.547 41.030 1.00 0.79 C
ATOM 18 C6 A B2311 -89.852 -40.294 41.688 1.00 0.79 C
ATOM 19 N6 A B2311 -90.124 -41.430 42.329 1.00 0.79 N
ATOM 20 N1 A B2311 -88.590 -39.832 41.692 1.00 0.79 N
ATOM 21 C2 A B2311 -88.335 -38.670 41.088 1.00 0.79 C
ATOM 22 N3 A B2311 -89.164 -37.855 40.456 1.00 0.79 N
ATOM 23 C4 A B2311 -90.405 -38.357 40.463 1.00 0.79 C
ATOM 24 P A B2312 -95.237 -35.754 36.149 1.00 17.94 P
ATOM 25 OP1 A B2312 -96.610 -35.215 36.278 1.00 8.94 O
ATOM 26 OP2 A B2312 -95.037 -37.213 36.131 1.00 8.94 O
ATOM 27 O5' A B2312 -94.645 -35.123 34.826 1.00 1.74 O
TER
Atoms:
C4: (-97.058,-41.121,43.333)
N3: (-95.961,-40.415,43.769)
OP1: (-98.493,-45.979,49.167)
OP2: (-99.701,-44.302,47.635)
C2: (-95.213,-40.664,44.884)
C1': (-94.870,-42.052,46.855)
C3': (-96.363,-42.755,48.535)
O5': (-97.322,-44.942,47.236)
O4': (-94.767,-43.458,46.974)
C5': (-96.126,-45.191,47.948)
P: (-98.723,-45.413,47.812)
C4': (-95.424,-43.892,48.187)
C2': (-95.568,-41.535,48.111)
O2': (-94.586,-41.220,49.072)
N1: (-95.618,-41.744,45.628)
O4: (-97.681,-40.726,42.342)
O2: (-94.269,-39.979,45.185)
C6: (-96.695,-42.503,45.242)
C5: (-97.410,-42.236,44.151)
O3': (-96.682,-42.743,49.905)
N3: (-95.961,-40.415,43.769)
OP1: (-98.493,-45.979,49.167)
OP2: (-99.701,-44.302,47.635)
C2: (-95.213,-40.664,44.884)
C1': (-94.870,-42.052,46.855)
C3': (-96.363,-42.755,48.535)
O5': (-97.322,-44.942,47.236)
O4': (-94.767,-43.458,46.974)
C5': (-96.126,-45.191,47.948)
P: (-98.723,-45.413,47.812)
C4': (-95.424,-43.892,48.187)
C2': (-95.568,-41.535,48.111)
O2': (-94.586,-41.220,49.072)
N1: (-95.618,-41.744,45.628)
O4: (-97.681,-40.726,42.342)
O2: (-94.269,-39.979,45.185)
C6: (-96.695,-42.503,45.242)
C5: (-97.410,-42.236,44.151)
O3': (-96.682,-42.743,49.905)
OP1: (-97.439,-36.101,41.941)
OP2: (-95.753,-37.878,42.705)
C3': (-93.732,-35.931,38.298)
C1': (-91.654,-36.440,39.361)
C5': (-94.761,-34.982,40.451)
O4': (-92.422,-35.635,40.246)
C8: (-92.548,-38.682,40.186)
O2': (-91.576,-35.412,37.211)
C6: (-89.852,-40.294,41.688)
C5: (-90.811,-39.547,41.030)
C4: (-90.405,-38.357,40.463)
P: (-96.038,-36.511,42.201)
C4': (-93.557,-35.072,39.537)
C2': (-92.299,-36.362,37.971)
C2: (-88.335,-38.670,41.088)
N1: (-88.590,-39.832,41.692)
N3: (-89.164,-37.855,40.456)
N6: (-90.124,-41.430,42.329)
N7: (-92.161,-39.754,40.835)
N9: (-91.541,-37.778,39.956)
O5': (-95.169,-36.298,40.877)
O3': (-94.297,-35.114,37.282)
OP2: (-95.753,-37.878,42.705)
C3': (-93.732,-35.931,38.298)
C1': (-91.654,-36.440,39.361)
C5': (-94.761,-34.982,40.451)
O4': (-92.422,-35.635,40.246)
C8: (-92.548,-38.682,40.186)
O2': (-91.576,-35.412,37.211)
C6: (-89.852,-40.294,41.688)
C5: (-90.811,-39.547,41.030)
C4: (-90.405,-38.357,40.463)
P: (-96.038,-36.511,42.201)
C4': (-93.557,-35.072,39.537)
C2': (-92.299,-36.362,37.971)
C2: (-88.335,-38.670,41.088)
N1: (-88.590,-39.832,41.692)
N3: (-89.164,-37.855,40.456)
N6: (-90.124,-41.430,42.329)
N7: (-92.161,-39.754,40.835)
N9: (-91.541,-37.778,39.956)
O5': (-95.169,-36.298,40.877)
O3': (-94.297,-35.114,37.282)
Image (generated by PyMOL):