Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQN:0988:01233
Extra
PDB:
ATOM 1 O3' U A 987 19.185 71.715 71.225 1.00 76.17 O
ATOM 2 P U A 988 17.627 72.028 70.993 1.00 79.16 P
ATOM 3 OP1 U A 988 16.960 72.319 72.285 1.00 79.88 O
ATOM 4 OP2 U A 988 17.114 70.937 70.129 1.00 80.99 O
ATOM 5 O5' U A 988 17.627 73.376 70.141 1.00 81.04 O
ATOM 6 C5' U A 988 17.921 74.639 70.767 1.00 81.67 C
ATOM 7 C4' U A 988 17.529 75.789 69.864 1.00 81.75 C
ATOM 8 O4' U A 988 16.205 75.557 69.306 1.00 83.06 O
ATOM 9 C3' U A 988 17.444 77.129 70.583 1.00 81.35 C
ATOM 10 O3' U A 988 17.708 78.192 69.666 1.00 79.60 O
ATOM 11 C2' U A 988 15.975 77.171 70.985 1.00 82.35 C
ATOM 12 O2' U A 988 15.520 78.477 71.270 1.00 82.18 O
ATOM 13 C1' U A 988 15.324 76.580 69.732 1.00 84.18 C
ATOM 14 N1 U A 988 13.977 76.003 69.901 1.00 86.68 N
ATOM 15 C2 U A 988 12.877 76.823 69.649 1.00 87.47 C
ATOM 16 O2 U A 988 12.974 77.991 69.304 1.00 87.60 O
ATOM 17 N3 U A 988 11.654 76.219 69.812 1.00 88.78 N
ATOM 18 C4 U A 988 11.411 74.912 70.188 1.00 89.95 C
ATOM 19 O4 U A 988 10.244 74.515 70.283 1.00 90.37 O
ATOM 20 C5 U A 988 12.590 74.129 70.434 1.00 89.35 C
ATOM 21 C6 U A 988 13.801 74.687 70.289 1.00 87.65 C
ATOM 22 P U A 989 19.163 78.880 69.615 1.00 78.52 P
ATOM 23 OP1 U A 989 18.970 80.271 69.124 1.00 78.75 O
ATOM 24 OP2 U A 989 20.072 77.959 68.878 1.00 78.08 O
ATOM 25 O5' U A 989 19.652 78.940 71.133 1.00 75.59 O
TER
ATOM 1 O3' C B1232 10.017 79.244 70.948 1.00 58.25 O
ATOM 2 P A B1233 9.546 79.339 69.417 1.00 59.01 P
ATOM 3 OP1 A B1233 9.548 77.953 68.888 1.00 59.78 O
ATOM 4 OP2 A B1233 10.360 80.379 68.738 1.00 59.82 O
ATOM 5 O5' A B1233 8.045 79.860 69.524 1.00 55.39 O
ATOM 6 C5' A B1233 7.036 79.054 70.157 1.00 53.08 C
ATOM 7 C4' A B1233 5.692 79.739 70.089 1.00 52.30 C
ATOM 8 O4' A B1233 5.668 80.899 70.959 1.00 52.52 O
ATOM 9 C3' A B1233 5.301 80.304 68.739 1.00 51.95 C
ATOM 10 O3' A B1233 4.842 79.301 67.854 1.00 51.01 O
ATOM 11 C2' A B1233 4.221 81.309 69.119 1.00 53.15 C
ATOM 12 O2' A B1233 2.977 80.709 69.419 1.00 52.77 O
ATOM 13 C1' A B1233 4.807 81.890 70.407 1.00 53.66 C
ATOM 14 N9 A B1233 5.582 83.114 70.183 1.00 54.95 N
ATOM 15 C8 A B1233 6.943 83.241 70.024 1.00 54.81 C
ATOM 16 N7 A B1233 7.345 84.479 69.868 1.00 54.58 N
ATOM 17 C5 A B1233 6.172 85.219 69.916 1.00 54.67 C
ATOM 18 C6 A B1233 5.921 86.595 69.806 1.00 54.96 C
ATOM 19 N6 A B1233 6.874 87.505 69.610 1.00 55.24 N
ATOM 20 N1 A B1233 4.640 87.009 69.899 1.00 55.13 N
ATOM 21 C2 A B1233 3.682 86.092 70.081 1.00 55.19 C
ATOM 22 N3 A B1233 3.791 84.769 70.194 1.00 55.61 N
ATOM 23 C4 A B1233 5.078 84.392 70.103 1.00 54.78 C
ATOM 24 P C B1234 5.121 79.452 66.283 1.00 51.59 P
ATOM 25 OP1 C B1234 4.470 78.307 65.599 1.00 54.92 O
ATOM 26 OP2 C B1234 6.569 79.682 66.095 1.00 51.33 O
ATOM 27 O5' C B1234 4.314 80.764 65.890 1.00 49.68 O
TER
ATOM 2 P U A 988 17.627 72.028 70.993 1.00 79.16 P
ATOM 3 OP1 U A 988 16.960 72.319 72.285 1.00 79.88 O
ATOM 4 OP2 U A 988 17.114 70.937 70.129 1.00 80.99 O
ATOM 5 O5' U A 988 17.627 73.376 70.141 1.00 81.04 O
ATOM 6 C5' U A 988 17.921 74.639 70.767 1.00 81.67 C
ATOM 7 C4' U A 988 17.529 75.789 69.864 1.00 81.75 C
ATOM 8 O4' U A 988 16.205 75.557 69.306 1.00 83.06 O
ATOM 9 C3' U A 988 17.444 77.129 70.583 1.00 81.35 C
ATOM 10 O3' U A 988 17.708 78.192 69.666 1.00 79.60 O
ATOM 11 C2' U A 988 15.975 77.171 70.985 1.00 82.35 C
ATOM 12 O2' U A 988 15.520 78.477 71.270 1.00 82.18 O
ATOM 13 C1' U A 988 15.324 76.580 69.732 1.00 84.18 C
ATOM 14 N1 U A 988 13.977 76.003 69.901 1.00 86.68 N
ATOM 15 C2 U A 988 12.877 76.823 69.649 1.00 87.47 C
ATOM 16 O2 U A 988 12.974 77.991 69.304 1.00 87.60 O
ATOM 17 N3 U A 988 11.654 76.219 69.812 1.00 88.78 N
ATOM 18 C4 U A 988 11.411 74.912 70.188 1.00 89.95 C
ATOM 19 O4 U A 988 10.244 74.515 70.283 1.00 90.37 O
ATOM 20 C5 U A 988 12.590 74.129 70.434 1.00 89.35 C
ATOM 21 C6 U A 988 13.801 74.687 70.289 1.00 87.65 C
ATOM 22 P U A 989 19.163 78.880 69.615 1.00 78.52 P
ATOM 23 OP1 U A 989 18.970 80.271 69.124 1.00 78.75 O
ATOM 24 OP2 U A 989 20.072 77.959 68.878 1.00 78.08 O
ATOM 25 O5' U A 989 19.652 78.940 71.133 1.00 75.59 O
TER
ATOM 1 O3' C B1232 10.017 79.244 70.948 1.00 58.25 O
ATOM 2 P A B1233 9.546 79.339 69.417 1.00 59.01 P
ATOM 3 OP1 A B1233 9.548 77.953 68.888 1.00 59.78 O
ATOM 4 OP2 A B1233 10.360 80.379 68.738 1.00 59.82 O
ATOM 5 O5' A B1233 8.045 79.860 69.524 1.00 55.39 O
ATOM 6 C5' A B1233 7.036 79.054 70.157 1.00 53.08 C
ATOM 7 C4' A B1233 5.692 79.739 70.089 1.00 52.30 C
ATOM 8 O4' A B1233 5.668 80.899 70.959 1.00 52.52 O
ATOM 9 C3' A B1233 5.301 80.304 68.739 1.00 51.95 C
ATOM 10 O3' A B1233 4.842 79.301 67.854 1.00 51.01 O
ATOM 11 C2' A B1233 4.221 81.309 69.119 1.00 53.15 C
ATOM 12 O2' A B1233 2.977 80.709 69.419 1.00 52.77 O
ATOM 13 C1' A B1233 4.807 81.890 70.407 1.00 53.66 C
ATOM 14 N9 A B1233 5.582 83.114 70.183 1.00 54.95 N
ATOM 15 C8 A B1233 6.943 83.241 70.024 1.00 54.81 C
ATOM 16 N7 A B1233 7.345 84.479 69.868 1.00 54.58 N
ATOM 17 C5 A B1233 6.172 85.219 69.916 1.00 54.67 C
ATOM 18 C6 A B1233 5.921 86.595 69.806 1.00 54.96 C
ATOM 19 N6 A B1233 6.874 87.505 69.610 1.00 55.24 N
ATOM 20 N1 A B1233 4.640 87.009 69.899 1.00 55.13 N
ATOM 21 C2 A B1233 3.682 86.092 70.081 1.00 55.19 C
ATOM 22 N3 A B1233 3.791 84.769 70.194 1.00 55.61 N
ATOM 23 C4 A B1233 5.078 84.392 70.103 1.00 54.78 C
ATOM 24 P C B1234 5.121 79.452 66.283 1.00 51.59 P
ATOM 25 OP1 C B1234 4.470 78.307 65.599 1.00 54.92 O
ATOM 26 OP2 C B1234 6.569 79.682 66.095 1.00 51.33 O
ATOM 27 O5' C B1234 4.314 80.764 65.890 1.00 49.68 O
TER
Atoms:
C4: (11.411,74.912,70.188)
N3: (11.654,76.219,69.812)
OP1: (16.960,72.319,72.285)
OP2: (17.114,70.937,70.129)
C2: (12.877,76.823,69.649)
C1': (15.324,76.580,69.732)
C3': (17.444,77.129,70.583)
O5': (17.627,73.376,70.141)
O4': (16.205,75.557,69.306)
C5': (17.921,74.639,70.767)
P: (17.627,72.028,70.993)
C4': (17.529,75.789,69.864)
C2': (15.975,77.171,70.985)
O2': (15.520,78.477,71.270)
N1: (13.977,76.003,69.901)
O4: (10.244,74.515,70.283)
O2: (12.974,77.991,69.304)
C6: (13.801,74.687,70.289)
C5: (12.590,74.129,70.434)
O3': (17.708,78.192,69.666)
N3: (11.654,76.219,69.812)
OP1: (16.960,72.319,72.285)
OP2: (17.114,70.937,70.129)
C2: (12.877,76.823,69.649)
C1': (15.324,76.580,69.732)
C3': (17.444,77.129,70.583)
O5': (17.627,73.376,70.141)
O4': (16.205,75.557,69.306)
C5': (17.921,74.639,70.767)
P: (17.627,72.028,70.993)
C4': (17.529,75.789,69.864)
C2': (15.975,77.171,70.985)
O2': (15.520,78.477,71.270)
N1: (13.977,76.003,69.901)
O4: (10.244,74.515,70.283)
O2: (12.974,77.991,69.304)
C6: (13.801,74.687,70.289)
C5: (12.590,74.129,70.434)
O3': (17.708,78.192,69.666)
OP1: (9.548,77.953,68.888)
OP2: (10.360,80.379,68.738)
C3': (5.301,80.304,68.739)
C1': (4.807,81.890,70.407)
C5': (7.036,79.054,70.157)
O4': (5.668,80.899,70.959)
C8: (6.943,83.241,70.024)
O2': (2.977,80.709,69.419)
C6: (5.921,86.595,69.806)
C5: (6.172,85.219,69.916)
C4: (5.078,84.392,70.103)
P: (9.546,79.339,69.417)
C4': (5.692,79.739,70.089)
C2': (4.221,81.309,69.119)
C2: (3.682,86.092,70.081)
N1: (4.640,87.009,69.899)
N3: (3.791,84.769,70.194)
N6: (6.874,87.505,69.610)
N7: (7.345,84.479,69.868)
N9: (5.582,83.114,70.183)
O5': (8.045,79.860,69.524)
O3': (4.842,79.301,67.854)
OP2: (10.360,80.379,68.738)
C3': (5.301,80.304,68.739)
C1': (4.807,81.890,70.407)
C5': (7.036,79.054,70.157)
O4': (5.668,80.899,70.959)
C8: (6.943,83.241,70.024)
O2': (2.977,80.709,69.419)
C6: (5.921,86.595,69.806)
C5: (6.172,85.219,69.916)
C4: (5.078,84.392,70.103)
P: (9.546,79.339,69.417)
C4': (5.692,79.739,70.089)
C2': (4.221,81.309,69.119)
C2: (3.682,86.092,70.081)
N1: (4.640,87.009,69.899)
N3: (3.791,84.769,70.194)
N6: (6.874,87.505,69.610)
N7: (7.345,84.479,69.868)
N9: (5.582,83.114,70.183)
O5': (8.045,79.860,69.524)
O3': (4.842,79.301,67.854)
Image (generated by PyMOL):