Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:V54:V57
Extra
PDB:
ATOM 1 O3' U A 53 -90.411 144.815 127.557 1.00 53.09 O
ATOM 2 P U A 54 -91.950 144.702 127.095 1.00 53.93 P
ATOM 3 OP1 U A 54 -92.674 145.857 127.683 1.00 53.93 O
ATOM 4 OP2 U A 54 -92.412 143.325 127.418 1.00 53.93 O
ATOM 5 O5' U A 54 -91.841 144.879 125.525 1.00 53.93 O
ATOM 6 C5' U A 54 -91.099 145.945 124.971 1.00 53.93 C
ATOM 7 C4' U A 54 -90.864 145.727 123.509 1.00 53.93 C
ATOM 8 O4' U A 54 -90.054 144.542 123.316 1.00 53.93 O
ATOM 9 C3' U A 54 -92.094 145.434 122.671 1.00 53.93 C
ATOM 10 O3' U A 54 -92.876 146.583 122.388 1.00 53.93 O
ATOM 11 C2' U A 54 -91.486 144.782 121.438 1.00 53.93 C
ATOM 12 O2' U A 54 -90.888 145.758 120.594 1.00 53.93 O
ATOM 13 C1' U A 54 -90.376 143.949 122.070 1.00 53.93 C
ATOM 14 N1 U A 54 -90.785 142.549 122.296 1.00 53.32 N
ATOM 15 C2 U A 54 -90.288 141.649 121.374 1.00 53.32 C
ATOM 16 O2 U A 54 -89.587 141.998 120.449 1.00 53.32 O
ATOM 17 N3 U A 54 -90.643 140.343 121.571 1.00 53.32 N
ATOM 18 C4 U A 54 -91.432 139.856 122.594 1.00 53.32 C
ATOM 19 O4 U A 54 -91.652 138.641 122.622 1.00 53.32 O
ATOM 20 C5 U A 54 -91.914 140.850 123.526 1.00 53.32 C
ATOM 21 C6 U A 54 -91.581 142.141 123.347 1.00 53.32 C
ATOM 22 P C A 55 -94.444 146.423 122.049 1.00 68.09 P
ATOM 23 OP1 C A 55 -94.703 147.226 120.827 1.00 68.09 O
ATOM 24 OP2 C A 55 -95.201 146.748 123.293 1.00 68.09 O
ATOM 25 O5' C A 55 -94.579 144.863 121.722 1.00 68.09 O
TER
ATOM 1 O3' G B 56 -91.069 138.380 117.195 1.00 59.79 O
ATOM 2 P A B 57 -90.033 137.720 118.218 1.00 52.64 P
ATOM 3 OP1 A B 57 -90.736 136.608 118.900 1.00 52.64 O
ATOM 4 OP2 A B 57 -89.468 138.822 119.037 1.00 52.64 O
ATOM 5 O5' A B 57 -88.919 137.145 117.255 1.00 52.64 O
ATOM 6 C5' A B 57 -88.124 138.020 116.470 1.00 52.64 C
ATOM 7 C4' A B 57 -86.671 137.646 116.546 1.00 52.64 C
ATOM 8 O4' A B 57 -85.943 138.735 117.177 1.00 52.64 O
ATOM 9 C3' A B 57 -86.376 136.397 117.378 1.00 52.64 C
ATOM 10 O3' A B 57 -85.219 135.726 116.855 1.00 52.64 O
ATOM 11 C2' A B 57 -86.061 136.997 118.748 1.00 52.64 C
ATOM 12 O2' A B 57 -85.304 136.164 119.604 1.00 52.64 O
ATOM 13 C1' A B 57 -85.298 138.259 118.340 1.00 52.64 C
ATOM 14 N9 A B 57 -85.301 139.332 119.339 1.00 52.27 N
ATOM 15 C8 A B 57 -85.986 139.456 120.522 1.00 52.27 C
ATOM 16 N7 A B 57 -85.715 140.573 121.163 1.00 52.27 N
ATOM 17 C5 A B 57 -84.787 141.228 120.362 1.00 52.27 C
ATOM 18 C6 A B 57 -84.100 142.459 120.478 1.00 52.27 C
ATOM 19 N6 A B 57 -84.201 143.340 121.475 1.00 52.27 N
ATOM 20 N1 A B 57 -83.258 142.769 119.476 1.00 52.27 N
ATOM 21 C2 A B 57 -83.110 141.920 118.444 1.00 52.27 C
ATOM 22 N3 A B 57 -83.689 140.748 118.224 1.00 52.27 N
ATOM 23 C4 A B 57 -84.526 140.461 119.235 1.00 52.27 C
ATOM 24 P U B 58 -85.366 134.547 115.756 1.00 41.36 P
ATOM 25 OP1 U B 58 -86.112 135.117 114.596 1.00 41.36 O
ATOM 26 OP2 U B 58 -85.918 133.355 116.450 1.00 41.36 O
ATOM 27 O5' U B 58 -83.851 134.269 115.335 1.00 41.36 O
TER
ATOM 2 P U A 54 -91.950 144.702 127.095 1.00 53.93 P
ATOM 3 OP1 U A 54 -92.674 145.857 127.683 1.00 53.93 O
ATOM 4 OP2 U A 54 -92.412 143.325 127.418 1.00 53.93 O
ATOM 5 O5' U A 54 -91.841 144.879 125.525 1.00 53.93 O
ATOM 6 C5' U A 54 -91.099 145.945 124.971 1.00 53.93 C
ATOM 7 C4' U A 54 -90.864 145.727 123.509 1.00 53.93 C
ATOM 8 O4' U A 54 -90.054 144.542 123.316 1.00 53.93 O
ATOM 9 C3' U A 54 -92.094 145.434 122.671 1.00 53.93 C
ATOM 10 O3' U A 54 -92.876 146.583 122.388 1.00 53.93 O
ATOM 11 C2' U A 54 -91.486 144.782 121.438 1.00 53.93 C
ATOM 12 O2' U A 54 -90.888 145.758 120.594 1.00 53.93 O
ATOM 13 C1' U A 54 -90.376 143.949 122.070 1.00 53.93 C
ATOM 14 N1 U A 54 -90.785 142.549 122.296 1.00 53.32 N
ATOM 15 C2 U A 54 -90.288 141.649 121.374 1.00 53.32 C
ATOM 16 O2 U A 54 -89.587 141.998 120.449 1.00 53.32 O
ATOM 17 N3 U A 54 -90.643 140.343 121.571 1.00 53.32 N
ATOM 18 C4 U A 54 -91.432 139.856 122.594 1.00 53.32 C
ATOM 19 O4 U A 54 -91.652 138.641 122.622 1.00 53.32 O
ATOM 20 C5 U A 54 -91.914 140.850 123.526 1.00 53.32 C
ATOM 21 C6 U A 54 -91.581 142.141 123.347 1.00 53.32 C
ATOM 22 P C A 55 -94.444 146.423 122.049 1.00 68.09 P
ATOM 23 OP1 C A 55 -94.703 147.226 120.827 1.00 68.09 O
ATOM 24 OP2 C A 55 -95.201 146.748 123.293 1.00 68.09 O
ATOM 25 O5' C A 55 -94.579 144.863 121.722 1.00 68.09 O
TER
ATOM 1 O3' G B 56 -91.069 138.380 117.195 1.00 59.79 O
ATOM 2 P A B 57 -90.033 137.720 118.218 1.00 52.64 P
ATOM 3 OP1 A B 57 -90.736 136.608 118.900 1.00 52.64 O
ATOM 4 OP2 A B 57 -89.468 138.822 119.037 1.00 52.64 O
ATOM 5 O5' A B 57 -88.919 137.145 117.255 1.00 52.64 O
ATOM 6 C5' A B 57 -88.124 138.020 116.470 1.00 52.64 C
ATOM 7 C4' A B 57 -86.671 137.646 116.546 1.00 52.64 C
ATOM 8 O4' A B 57 -85.943 138.735 117.177 1.00 52.64 O
ATOM 9 C3' A B 57 -86.376 136.397 117.378 1.00 52.64 C
ATOM 10 O3' A B 57 -85.219 135.726 116.855 1.00 52.64 O
ATOM 11 C2' A B 57 -86.061 136.997 118.748 1.00 52.64 C
ATOM 12 O2' A B 57 -85.304 136.164 119.604 1.00 52.64 O
ATOM 13 C1' A B 57 -85.298 138.259 118.340 1.00 52.64 C
ATOM 14 N9 A B 57 -85.301 139.332 119.339 1.00 52.27 N
ATOM 15 C8 A B 57 -85.986 139.456 120.522 1.00 52.27 C
ATOM 16 N7 A B 57 -85.715 140.573 121.163 1.00 52.27 N
ATOM 17 C5 A B 57 -84.787 141.228 120.362 1.00 52.27 C
ATOM 18 C6 A B 57 -84.100 142.459 120.478 1.00 52.27 C
ATOM 19 N6 A B 57 -84.201 143.340 121.475 1.00 52.27 N
ATOM 20 N1 A B 57 -83.258 142.769 119.476 1.00 52.27 N
ATOM 21 C2 A B 57 -83.110 141.920 118.444 1.00 52.27 C
ATOM 22 N3 A B 57 -83.689 140.748 118.224 1.00 52.27 N
ATOM 23 C4 A B 57 -84.526 140.461 119.235 1.00 52.27 C
ATOM 24 P U B 58 -85.366 134.547 115.756 1.00 41.36 P
ATOM 25 OP1 U B 58 -86.112 135.117 114.596 1.00 41.36 O
ATOM 26 OP2 U B 58 -85.918 133.355 116.450 1.00 41.36 O
ATOM 27 O5' U B 58 -83.851 134.269 115.335 1.00 41.36 O
TER
Atoms:
C4: (-91.432,139.856,122.594)
N3: (-90.643,140.343,121.571)
OP1: (-92.674,145.857,127.683)
OP2: (-92.412,143.325,127.418)
C2: (-90.288,141.649,121.374)
C1': (-90.376,143.949,122.070)
C3': (-92.094,145.434,122.671)
O5': (-91.841,144.879,125.525)
O4': (-90.054,144.542,123.316)
C5': (-91.099,145.945,124.971)
P: (-91.950,144.702,127.095)
C4': (-90.864,145.727,123.509)
C2': (-91.486,144.782,121.438)
O2': (-90.888,145.758,120.594)
N1: (-90.785,142.549,122.296)
O4: (-91.652,138.641,122.622)
O2: (-89.587,141.998,120.449)
C6: (-91.581,142.141,123.347)
C5: (-91.914,140.850,123.526)
O3': (-92.876,146.583,122.388)
N3: (-90.643,140.343,121.571)
OP1: (-92.674,145.857,127.683)
OP2: (-92.412,143.325,127.418)
C2: (-90.288,141.649,121.374)
C1': (-90.376,143.949,122.070)
C3': (-92.094,145.434,122.671)
O5': (-91.841,144.879,125.525)
O4': (-90.054,144.542,123.316)
C5': (-91.099,145.945,124.971)
P: (-91.950,144.702,127.095)
C4': (-90.864,145.727,123.509)
C2': (-91.486,144.782,121.438)
O2': (-90.888,145.758,120.594)
N1: (-90.785,142.549,122.296)
O4: (-91.652,138.641,122.622)
O2: (-89.587,141.998,120.449)
C6: (-91.581,142.141,123.347)
C5: (-91.914,140.850,123.526)
O3': (-92.876,146.583,122.388)
OP1: (-90.736,136.608,118.900)
OP2: (-89.468,138.822,119.037)
C3': (-86.376,136.397,117.378)
C1': (-85.298,138.259,118.340)
C5': (-88.124,138.020,116.470)
O4': (-85.943,138.735,117.177)
C8: (-85.986,139.456,120.522)
O2': (-85.304,136.164,119.604)
C6: (-84.100,142.459,120.478)
C5: (-84.787,141.228,120.362)
C4: (-84.526,140.461,119.235)
P: (-90.033,137.720,118.218)
C4': (-86.671,137.646,116.546)
C2': (-86.061,136.997,118.748)
C2: (-83.110,141.920,118.444)
N1: (-83.258,142.769,119.476)
N3: (-83.689,140.748,118.224)
N6: (-84.201,143.340,121.475)
N7: (-85.715,140.573,121.163)
N9: (-85.301,139.332,119.339)
O5': (-88.919,137.145,117.255)
O3': (-85.219,135.726,116.855)
OP2: (-89.468,138.822,119.037)
C3': (-86.376,136.397,117.378)
C1': (-85.298,138.259,118.340)
C5': (-88.124,138.020,116.470)
O4': (-85.943,138.735,117.177)
C8: (-85.986,139.456,120.522)
O2': (-85.304,136.164,119.604)
C6: (-84.100,142.459,120.478)
C5: (-84.787,141.228,120.362)
C4: (-84.526,140.461,119.235)
P: (-90.033,137.720,118.218)
C4': (-86.671,137.646,116.546)
C2': (-86.061,136.997,118.748)
C2: (-83.110,141.920,118.444)
N1: (-83.258,142.769,119.476)
N3: (-83.689,140.748,118.224)
N6: (-84.201,143.340,121.475)
N7: (-85.715,140.573,121.163)
N9: (-85.301,139.332,119.339)
O5': (-88.919,137.145,117.255)
O3': (-85.219,135.726,116.855)
Image (generated by PyMOL):