Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ9:0988:01233
Extra
PDB:
ATOM 1 O3' U A 987 18.745 71.755 71.095 1.00 63.30 O
ATOM 2 P U A 988 17.253 72.361 70.990 1.00 65.83 P
ATOM 3 OP1 U A 988 16.792 72.819 72.331 1.00 66.91 O
ATOM 4 OP2 U A 988 16.440 71.383 70.228 1.00 67.90 O
ATOM 5 O5' U A 988 17.417 73.659 70.078 1.00 66.92 O
ATOM 6 C5' U A 988 17.745 74.929 70.670 1.00 66.70 C
ATOM 7 C4' U A 988 17.316 76.068 69.773 1.00 66.21 C
ATOM 8 O4' U A 988 15.999 75.807 69.204 1.00 67.24 O
ATOM 9 C3' U A 988 17.192 77.391 70.516 1.00 65.96 C
ATOM 10 O3' U A 988 17.470 78.467 69.627 1.00 63.97 O
ATOM 11 C2' U A 988 15.713 77.401 70.895 1.00 67.10 C
ATOM 12 O2' U A 988 15.205 78.687 71.196 1.00 67.03 O
ATOM 13 C1' U A 988 15.089 76.807 69.629 1.00 67.79 C
ATOM 14 N1 U A 988 13.760 76.194 69.811 1.00 69.02 N
ATOM 15 C2 U A 988 12.633 76.981 69.564 1.00 69.59 C
ATOM 16 O2 U A 988 12.692 78.142 69.190 1.00 68.66 O
ATOM 17 N3 U A 988 11.429 76.351 69.772 1.00 71.01 N
ATOM 18 C4 U A 988 11.227 75.043 70.181 1.00 72.21 C
ATOM 19 O4 U A 988 10.072 74.621 70.325 1.00 72.42 O
ATOM 20 C5 U A 988 12.432 74.293 70.402 1.00 72.09 C
ATOM 21 C6 U A 988 13.626 74.879 70.216 1.00 70.66 C
ATOM 22 P U A 989 18.947 79.102 69.567 1.00 63.17 P
ATOM 23 OP1 U A 989 18.784 80.514 69.112 1.00 62.68 O
ATOM 24 OP2 U A 989 19.809 78.164 68.786 1.00 62.05 O
ATOM 25 O5' U A 989 19.466 79.106 71.076 1.00 60.13 O
TER
ATOM 1 O3' C B1232 9.962 79.251 70.748 1.00 49.00 O
ATOM 2 P A B1233 9.400 79.381 69.254 1.00 49.54 P
ATOM 3 OP1 A B1233 9.282 77.992 68.739 1.00 51.08 O
ATOM 4 OP2 A B1233 10.218 80.366 68.507 1.00 50.33 O
ATOM 5 O5' A B1233 7.941 79.986 69.464 1.00 47.59 O
ATOM 6 C5' A B1233 6.895 79.179 70.040 1.00 46.14 C
ATOM 7 C4' A B1233 5.570 79.903 69.977 1.00 45.24 C
ATOM 8 O4' A B1233 5.583 81.055 70.858 1.00 45.81 O
ATOM 9 C3' A B1233 5.201 80.495 68.632 1.00 45.59 C
ATOM 10 O3' A B1233 4.716 79.505 67.749 1.00 46.05 O
ATOM 11 C2' A B1233 4.156 81.532 69.022 1.00 46.18 C
ATOM 12 O2' A B1233 2.897 80.975 69.337 1.00 46.43 O
ATOM 13 C1' A B1233 4.764 82.083 70.311 1.00 45.90 C
ATOM 14 N9 A B1233 5.597 83.266 70.081 1.00 46.55 N
ATOM 15 C8 A B1233 6.965 83.325 69.923 1.00 46.12 C
ATOM 16 N7 A B1233 7.424 84.542 69.744 1.00 47.02 N
ATOM 17 C5 A B1233 6.285 85.338 69.784 1.00 46.10 C
ATOM 18 C6 A B1233 6.098 86.725 69.658 1.00 45.92 C
ATOM 19 N6 A B1233 7.094 87.589 69.453 1.00 45.83 N
ATOM 20 N1 A B1233 4.835 87.200 69.745 1.00 47.16 N
ATOM 21 C2 A B1233 3.833 86.329 69.944 1.00 47.21 C
ATOM 22 N3 A B1233 3.883 85.002 70.077 1.00 47.35 N
ATOM 23 C4 A B1233 5.152 84.565 69.986 1.00 46.68 C
ATOM 24 P C B1234 4.999 79.644 66.177 1.00 47.25 P
ATOM 25 OP1 C B1234 4.384 78.455 65.517 1.00 47.08 O
ATOM 26 OP2 C B1234 6.448 79.923 65.979 1.00 46.75 O
ATOM 27 O5' C B1234 4.169 80.944 65.780 1.00 44.41 O
TER
ATOM 2 P U A 988 17.253 72.361 70.990 1.00 65.83 P
ATOM 3 OP1 U A 988 16.792 72.819 72.331 1.00 66.91 O
ATOM 4 OP2 U A 988 16.440 71.383 70.228 1.00 67.90 O
ATOM 5 O5' U A 988 17.417 73.659 70.078 1.00 66.92 O
ATOM 6 C5' U A 988 17.745 74.929 70.670 1.00 66.70 C
ATOM 7 C4' U A 988 17.316 76.068 69.773 1.00 66.21 C
ATOM 8 O4' U A 988 15.999 75.807 69.204 1.00 67.24 O
ATOM 9 C3' U A 988 17.192 77.391 70.516 1.00 65.96 C
ATOM 10 O3' U A 988 17.470 78.467 69.627 1.00 63.97 O
ATOM 11 C2' U A 988 15.713 77.401 70.895 1.00 67.10 C
ATOM 12 O2' U A 988 15.205 78.687 71.196 1.00 67.03 O
ATOM 13 C1' U A 988 15.089 76.807 69.629 1.00 67.79 C
ATOM 14 N1 U A 988 13.760 76.194 69.811 1.00 69.02 N
ATOM 15 C2 U A 988 12.633 76.981 69.564 1.00 69.59 C
ATOM 16 O2 U A 988 12.692 78.142 69.190 1.00 68.66 O
ATOM 17 N3 U A 988 11.429 76.351 69.772 1.00 71.01 N
ATOM 18 C4 U A 988 11.227 75.043 70.181 1.00 72.21 C
ATOM 19 O4 U A 988 10.072 74.621 70.325 1.00 72.42 O
ATOM 20 C5 U A 988 12.432 74.293 70.402 1.00 72.09 C
ATOM 21 C6 U A 988 13.626 74.879 70.216 1.00 70.66 C
ATOM 22 P U A 989 18.947 79.102 69.567 1.00 63.17 P
ATOM 23 OP1 U A 989 18.784 80.514 69.112 1.00 62.68 O
ATOM 24 OP2 U A 989 19.809 78.164 68.786 1.00 62.05 O
ATOM 25 O5' U A 989 19.466 79.106 71.076 1.00 60.13 O
TER
ATOM 1 O3' C B1232 9.962 79.251 70.748 1.00 49.00 O
ATOM 2 P A B1233 9.400 79.381 69.254 1.00 49.54 P
ATOM 3 OP1 A B1233 9.282 77.992 68.739 1.00 51.08 O
ATOM 4 OP2 A B1233 10.218 80.366 68.507 1.00 50.33 O
ATOM 5 O5' A B1233 7.941 79.986 69.464 1.00 47.59 O
ATOM 6 C5' A B1233 6.895 79.179 70.040 1.00 46.14 C
ATOM 7 C4' A B1233 5.570 79.903 69.977 1.00 45.24 C
ATOM 8 O4' A B1233 5.583 81.055 70.858 1.00 45.81 O
ATOM 9 C3' A B1233 5.201 80.495 68.632 1.00 45.59 C
ATOM 10 O3' A B1233 4.716 79.505 67.749 1.00 46.05 O
ATOM 11 C2' A B1233 4.156 81.532 69.022 1.00 46.18 C
ATOM 12 O2' A B1233 2.897 80.975 69.337 1.00 46.43 O
ATOM 13 C1' A B1233 4.764 82.083 70.311 1.00 45.90 C
ATOM 14 N9 A B1233 5.597 83.266 70.081 1.00 46.55 N
ATOM 15 C8 A B1233 6.965 83.325 69.923 1.00 46.12 C
ATOM 16 N7 A B1233 7.424 84.542 69.744 1.00 47.02 N
ATOM 17 C5 A B1233 6.285 85.338 69.784 1.00 46.10 C
ATOM 18 C6 A B1233 6.098 86.725 69.658 1.00 45.92 C
ATOM 19 N6 A B1233 7.094 87.589 69.453 1.00 45.83 N
ATOM 20 N1 A B1233 4.835 87.200 69.745 1.00 47.16 N
ATOM 21 C2 A B1233 3.833 86.329 69.944 1.00 47.21 C
ATOM 22 N3 A B1233 3.883 85.002 70.077 1.00 47.35 N
ATOM 23 C4 A B1233 5.152 84.565 69.986 1.00 46.68 C
ATOM 24 P C B1234 4.999 79.644 66.177 1.00 47.25 P
ATOM 25 OP1 C B1234 4.384 78.455 65.517 1.00 47.08 O
ATOM 26 OP2 C B1234 6.448 79.923 65.979 1.00 46.75 O
ATOM 27 O5' C B1234 4.169 80.944 65.780 1.00 44.41 O
TER
Atoms:
C4: (11.227,75.043,70.181)
N3: (11.429,76.351,69.772)
OP1: (16.792,72.819,72.331)
OP2: (16.440,71.383,70.228)
C2: (12.633,76.981,69.564)
C1': (15.089,76.807,69.629)
C3': (17.192,77.391,70.516)
O5': (17.417,73.659,70.078)
O4': (15.999,75.807,69.204)
C5': (17.745,74.929,70.670)
P: (17.253,72.361,70.990)
C4': (17.316,76.068,69.773)
C2': (15.713,77.401,70.895)
O2': (15.205,78.687,71.196)
N1: (13.760,76.194,69.811)
O4: (10.072,74.621,70.325)
O2: (12.692,78.142,69.190)
C6: (13.626,74.879,70.216)
C5: (12.432,74.293,70.402)
O3': (17.470,78.467,69.627)
N3: (11.429,76.351,69.772)
OP1: (16.792,72.819,72.331)
OP2: (16.440,71.383,70.228)
C2: (12.633,76.981,69.564)
C1': (15.089,76.807,69.629)
C3': (17.192,77.391,70.516)
O5': (17.417,73.659,70.078)
O4': (15.999,75.807,69.204)
C5': (17.745,74.929,70.670)
P: (17.253,72.361,70.990)
C4': (17.316,76.068,69.773)
C2': (15.713,77.401,70.895)
O2': (15.205,78.687,71.196)
N1: (13.760,76.194,69.811)
O4: (10.072,74.621,70.325)
O2: (12.692,78.142,69.190)
C6: (13.626,74.879,70.216)
C5: (12.432,74.293,70.402)
O3': (17.470,78.467,69.627)
OP1: (9.282,77.992,68.739)
OP2: (10.218,80.366,68.507)
C3': (5.201,80.495,68.632)
C1': (4.764,82.083,70.311)
C5': (6.895,79.179,70.040)
O4': (5.583,81.055,70.858)
C8: (6.965,83.325,69.923)
O2': (2.897,80.975,69.337)
C6: (6.098,86.725,69.658)
C5: (6.285,85.338,69.784)
C4: (5.152,84.565,69.986)
P: (9.400,79.381,69.254)
C4': (5.570,79.903,69.977)
C2': (4.156,81.532,69.022)
C2: (3.833,86.329,69.944)
N1: (4.835,87.200,69.745)
N3: (3.883,85.002,70.077)
N6: (7.094,87.589,69.453)
N7: (7.424,84.542,69.744)
N9: (5.597,83.266,70.081)
O5': (7.941,79.986,69.464)
O3': (4.716,79.505,67.749)
OP2: (10.218,80.366,68.507)
C3': (5.201,80.495,68.632)
C1': (4.764,82.083,70.311)
C5': (6.895,79.179,70.040)
O4': (5.583,81.055,70.858)
C8: (6.965,83.325,69.923)
O2': (2.897,80.975,69.337)
C6: (6.098,86.725,69.658)
C5: (6.285,85.338,69.784)
C4: (5.152,84.565,69.986)
P: (9.400,79.381,69.254)
C4': (5.570,79.903,69.977)
C2': (4.156,81.532,69.022)
C2: (3.833,86.329,69.944)
N1: (4.835,87.200,69.745)
N3: (3.883,85.002,70.077)
N6: (7.094,87.589,69.453)
N7: (7.424,84.542,69.744)
N9: (5.597,83.266,70.081)
O5': (7.941,79.986,69.464)
O3': (4.716,79.505,67.749)
Image (generated by PyMOL):