ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2ZM5:C54:C57

Extra

PDB:
ATOM 1 O3' U A 53 61.597 35.466 50.224 1.00 66.61 O
ATOM 2 P U A 54 62.678 34.976 51.318 1.00 68.58 P
ATOM 3 OP1 U A 54 64.029 35.204 50.739 1.00 70.22 O
ATOM 4 OP2 U A 54 62.303 33.622 51.799 1.00 68.78 O
ATOM 5 O5' U A 54 62.500 36.008 52.515 1.00 69.12 O
ATOM 6 C5' U A 54 62.625 37.405 52.264 1.00 68.43 C
ATOM 7 C4' U A 54 62.060 38.212 53.406 1.00 67.11 C
ATOM 8 O4' U A 54 60.624 38.014 53.513 1.00 65.41 O
ATOM 9 C3' U A 54 62.546 37.869 54.803 1.00 65.92 C
ATOM 10 O3' U A 54 63.849 38.382 55.056 1.00 65.44 O
ATOM 11 C2' U A 54 61.496 38.573 55.652 1.00 65.19 C
ATOM 12 O2' U A 54 61.705 39.970 55.745 1.00 65.34 O
ATOM 13 C1' U A 54 60.224 38.289 54.847 1.00 64.47 C
ATOM 14 N1 U A 54 59.533 37.122 55.409 1.00 63.03 N
ATOM 15 C2 U A 54 58.632 37.365 56.430 1.00 63.66 C
ATOM 16 O2 U A 54 58.326 38.494 56.793 1.00 62.15 O
ATOM 17 N3 U A 54 58.097 36.241 57.008 1.00 63.38 N
ATOM 18 C4 U A 54 58.350 34.930 56.664 1.00 61.73 C
ATOM 19 O4 U A 54 57.884 34.025 57.357 1.00 61.30 O
ATOM 20 C5 U A 54 59.247 34.767 55.563 1.00 61.55 C
ATOM 21 C6 U A 54 59.793 35.842 54.985 1.00 61.77 C
ATOM 22 P C A 55 64.916 37.490 55.865 1.00 65.62 P
ATOM 23 OP1 C A 55 66.205 38.223 55.810 1.00 64.29 O
ATOM 24 OP2 C A 55 64.829 36.089 55.365 1.00 65.48 O
ATOM 25 O5' C A 55 64.436 37.517 57.384 1.00 62.47 O
TER

ATOM 1 O3' G B 56 56.814 37.360 61.433 1.00 55.18 O
ATOM 2 P A B 57 55.679 36.729 60.488 1.00 56.96 P
ATOM 3 OP1 A B 57 54.841 35.865 61.367 1.00 57.33 O
ATOM 4 OP2 A B 57 56.310 36.140 59.279 1.00 57.14 O
ATOM 5 O5' A B 57 54.869 38.011 59.999 1.00 56.33 O
ATOM 6 C5' A B 57 54.097 38.816 60.897 1.00 53.07 C
ATOM 7 C4' A B 57 52.873 39.297 60.163 1.00 50.94 C
ATOM 8 O4' A B 57 53.259 39.900 58.911 1.00 51.38 O
ATOM 9 C3' A B 57 51.962 38.118 59.843 1.00 50.40 C
ATOM 10 O3' A B 57 50.803 38.442 60.581 1.00 50.94 O
ATOM 11 C2' A B 57 51.761 38.132 58.324 1.00 49.39 C
ATOM 12 O2' A B 57 50.517 37.878 57.691 1.00 53.86 O
ATOM 13 C1' A B 57 52.385 39.462 57.894 1.00 51.02 C
ATOM 14 N9 A B 57 53.113 39.472 56.619 1.00 51.02 N
ATOM 15 C8 A B 57 53.912 38.457 56.146 1.00 51.39 C
ATOM 16 N7 A B 57 54.441 38.695 54.970 1.00 49.49 N
ATOM 17 C5 A B 57 53.975 39.956 54.642 1.00 50.02 C
ATOM 18 C6 A B 57 54.192 40.754 53.519 1.00 49.77 C
ATOM 19 N6 A B 57 54.941 40.370 52.487 1.00 51.87 N
ATOM 20 N1 A B 57 53.603 41.967 53.482 1.00 50.43 N
ATOM 21 C2 A B 57 52.835 42.332 54.512 1.00 49.34 C
ATOM 22 N3 A B 57 52.543 41.660 55.635 1.00 50.14 N
ATOM 23 C4 A B 57 53.155 40.458 55.645 1.00 51.38 C
ATOM 24 P U B 58 49.601 37.414 60.740 1.00 47.78 P
ATOM 25 OP1 U B 58 49.617 36.983 62.157 1.00 50.25 O
ATOM 26 OP2 U B 58 49.562 36.400 59.655 1.00 50.68 O
ATOM 27 O5' U B 58 48.370 38.408 60.594 1.00 48.01 O
TER

Atoms:
C4: (58.350,34.930,56.664)
N3: (58.097,36.241,57.008)
OP1: (64.029,35.204,50.739)
OP2: (62.303,33.622,51.799)
C2: (58.632,37.365,56.430)
C1': (60.224,38.289,54.847)
C3': (62.546,37.869,54.803)
O5': (62.500,36.008,52.515)
O4': (60.624,38.014,53.513)
C5': (62.625,37.405,52.264)
P: (62.678,34.976,51.318)
C4': (62.060,38.212,53.406)
C2': (61.496,38.573,55.652)
O2': (61.705,39.970,55.745)
N1: (59.533,37.122,55.409)
O4: (57.884,34.025,57.357)
O2: (58.326,38.494,56.793)
C6: (59.793,35.842,54.985)
C5: (59.247,34.767,55.563)
O3': (63.849,38.382,55.056)
OP1: (54.841,35.865,61.367)
OP2: (56.310,36.140,59.279)
C3': (51.962,38.118,59.843)
C1': (52.385,39.462,57.894)
C5': (54.097,38.816,60.897)
O4': (53.259,39.900,58.911)
C8: (53.912,38.457,56.146)
O2': (50.517,37.878,57.691)
C6: (54.192,40.754,53.519)
C5: (53.975,39.956,54.642)
C4: (53.155,40.458,55.645)
P: (55.679,36.729,60.488)
C4': (52.873,39.297,60.163)
C2': (51.761,38.132,58.324)
C2: (52.835,42.332,54.512)
N1: (53.603,41.967,53.482)
N3: (52.543,41.660,55.635)
N6: (54.941,40.370,52.487)
N7: (54.441,38.695,54.970)
N9: (53.113,39.472,56.619)
O5': (54.869,38.011,59.999)
O3': (50.803,38.442,60.581)
Image (generated by PyMOL):
PyMOL image
show in jmol