Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1GTR:B52:B55
Extra
PDB:
ATOM 1 O3' U A 51 6.935 47.869 37.611 1.00 57.34 O
ATOM 2 P U A 52 5.469 47.401 38.098 1.00 56.00 P
ATOM 3 OP1 U A 52 4.453 48.478 38.068 1.00 55.64 O
ATOM 4 OP2 U A 52 5.590 46.542 39.301 1.00 55.36 O
ATOM 5 O5' U A 52 5.220 46.442 36.832 1.00 54.62 O
ATOM 6 C5' U A 52 5.036 46.933 35.497 1.00 53.84 C
ATOM 7 C4' U A 52 5.102 45.783 34.501 1.00 53.19 C
ATOM 8 O4' U A 52 6.334 45.034 34.637 1.00 53.17 O
ATOM 9 C3' U A 52 4.049 44.747 34.832 1.00 52.05 C
ATOM 10 O3' U A 52 2.746 45.181 34.398 1.00 52.06 O
ATOM 11 C2' U A 52 4.568 43.553 34.062 1.00 52.34 C
ATOM 12 O2' U A 52 4.453 43.733 32.643 1.00 52.97 O
ATOM 13 C1' U A 52 6.062 43.626 34.430 1.00 52.22 C
ATOM 14 N1 U A 52 6.328 42.791 35.655 1.00 50.78 N
ATOM 15 C2 U A 52 6.519 41.418 35.485 1.00 50.59 C
ATOM 16 O2 U A 52 6.538 40.858 34.390 1.00 50.91 O
ATOM 17 N3 U A 52 6.694 40.676 36.642 1.00 49.43 N
ATOM 18 C4 U A 52 6.700 41.162 37.937 1.00 49.28 C
ATOM 19 O4 U A 52 6.848 40.403 38.892 1.00 48.50 O
ATOM 20 C5 U A 52 6.506 42.589 38.025 1.00 49.77 C
ATOM 21 C6 U A 52 6.332 43.338 36.916 1.00 50.22 C
ATOM 22 P C A 53 1.526 45.061 35.463 1.00 50.56 P
ATOM 23 OP1 C A 53 0.669 45.845 34.544 1.00 49.67 O
ATOM 24 OP2 C A 53 1.652 45.452 36.888 1.00 49.71 O
ATOM 25 O5' C A 53 1.075 43.525 35.392 1.00 47.51 O
TER
ATOM 1 O3' G B 54 5.919 36.301 35.036 1.00 39.73 O
ATOM 2 P A B 55 7.321 36.819 35.630 1.00 39.85 P
ATOM 3 OP1 A B 55 7.721 35.570 36.323 1.00 38.70 O
ATOM 4 OP2 A B 55 7.503 38.127 36.301 1.00 38.68 O
ATOM 5 O5' A B 55 8.068 36.888 34.195 1.00 39.83 O
ATOM 6 C5' A B 55 8.424 35.724 33.429 1.00 38.93 C
ATOM 7 C4' A B 55 9.912 35.636 33.073 1.00 38.31 C
ATOM 8 O4' A B 55 10.354 36.858 32.454 1.00 38.78 O
ATOM 9 C3' A B 55 10.767 35.441 34.317 1.00 37.54 C
ATOM 10 O3' A B 55 11.910 34.669 33.951 1.00 37.50 O
ATOM 11 C2' A B 55 11.158 36.851 34.669 1.00 37.54 C
ATOM 12 O2' A B 55 12.380 36.856 35.416 1.00 38.42 O
ATOM 13 C1' A B 55 11.366 37.447 33.292 1.00 37.88 C
ATOM 14 N9 A B 55 11.217 38.921 33.316 1.00 37.71 N
ATOM 15 C8 A B 55 10.850 39.753 34.348 1.00 37.02 C
ATOM 16 N7 A B 55 10.851 41.015 34.032 1.00 36.97 N
ATOM 17 C5 A B 55 11.243 41.028 32.704 1.00 37.30 C
ATOM 18 C6 A B 55 11.436 42.068 31.794 1.00 37.73 C
ATOM 19 N6 A B 55 11.246 43.346 32.117 1.00 39.00 N
ATOM 20 N1 A B 55 11.824 41.741 30.554 1.00 37.45 N
ATOM 21 C2 A B 55 12.006 40.464 30.251 1.00 36.95 C
ATOM 22 N3 A B 55 11.858 39.392 31.009 1.00 36.63 N
ATOM 23 C4 A B 55 11.467 39.758 32.251 1.00 37.60 C
ATOM 24 P A B 56 11.789 33.065 33.897 1.00 38.34 P
ATOM 25 OP1 A B 56 10.999 32.148 33.046 1.00 38.01 O
ATOM 26 OP2 A B 56 11.675 32.981 35.375 1.00 39.52 O
ATOM 27 O5' A B 56 13.333 32.872 33.505 1.00 36.29 O
TER
ATOM 2 P U A 52 5.469 47.401 38.098 1.00 56.00 P
ATOM 3 OP1 U A 52 4.453 48.478 38.068 1.00 55.64 O
ATOM 4 OP2 U A 52 5.590 46.542 39.301 1.00 55.36 O
ATOM 5 O5' U A 52 5.220 46.442 36.832 1.00 54.62 O
ATOM 6 C5' U A 52 5.036 46.933 35.497 1.00 53.84 C
ATOM 7 C4' U A 52 5.102 45.783 34.501 1.00 53.19 C
ATOM 8 O4' U A 52 6.334 45.034 34.637 1.00 53.17 O
ATOM 9 C3' U A 52 4.049 44.747 34.832 1.00 52.05 C
ATOM 10 O3' U A 52 2.746 45.181 34.398 1.00 52.06 O
ATOM 11 C2' U A 52 4.568 43.553 34.062 1.00 52.34 C
ATOM 12 O2' U A 52 4.453 43.733 32.643 1.00 52.97 O
ATOM 13 C1' U A 52 6.062 43.626 34.430 1.00 52.22 C
ATOM 14 N1 U A 52 6.328 42.791 35.655 1.00 50.78 N
ATOM 15 C2 U A 52 6.519 41.418 35.485 1.00 50.59 C
ATOM 16 O2 U A 52 6.538 40.858 34.390 1.00 50.91 O
ATOM 17 N3 U A 52 6.694 40.676 36.642 1.00 49.43 N
ATOM 18 C4 U A 52 6.700 41.162 37.937 1.00 49.28 C
ATOM 19 O4 U A 52 6.848 40.403 38.892 1.00 48.50 O
ATOM 20 C5 U A 52 6.506 42.589 38.025 1.00 49.77 C
ATOM 21 C6 U A 52 6.332 43.338 36.916 1.00 50.22 C
ATOM 22 P C A 53 1.526 45.061 35.463 1.00 50.56 P
ATOM 23 OP1 C A 53 0.669 45.845 34.544 1.00 49.67 O
ATOM 24 OP2 C A 53 1.652 45.452 36.888 1.00 49.71 O
ATOM 25 O5' C A 53 1.075 43.525 35.392 1.00 47.51 O
TER
ATOM 1 O3' G B 54 5.919 36.301 35.036 1.00 39.73 O
ATOM 2 P A B 55 7.321 36.819 35.630 1.00 39.85 P
ATOM 3 OP1 A B 55 7.721 35.570 36.323 1.00 38.70 O
ATOM 4 OP2 A B 55 7.503 38.127 36.301 1.00 38.68 O
ATOM 5 O5' A B 55 8.068 36.888 34.195 1.00 39.83 O
ATOM 6 C5' A B 55 8.424 35.724 33.429 1.00 38.93 C
ATOM 7 C4' A B 55 9.912 35.636 33.073 1.00 38.31 C
ATOM 8 O4' A B 55 10.354 36.858 32.454 1.00 38.78 O
ATOM 9 C3' A B 55 10.767 35.441 34.317 1.00 37.54 C
ATOM 10 O3' A B 55 11.910 34.669 33.951 1.00 37.50 O
ATOM 11 C2' A B 55 11.158 36.851 34.669 1.00 37.54 C
ATOM 12 O2' A B 55 12.380 36.856 35.416 1.00 38.42 O
ATOM 13 C1' A B 55 11.366 37.447 33.292 1.00 37.88 C
ATOM 14 N9 A B 55 11.217 38.921 33.316 1.00 37.71 N
ATOM 15 C8 A B 55 10.850 39.753 34.348 1.00 37.02 C
ATOM 16 N7 A B 55 10.851 41.015 34.032 1.00 36.97 N
ATOM 17 C5 A B 55 11.243 41.028 32.704 1.00 37.30 C
ATOM 18 C6 A B 55 11.436 42.068 31.794 1.00 37.73 C
ATOM 19 N6 A B 55 11.246 43.346 32.117 1.00 39.00 N
ATOM 20 N1 A B 55 11.824 41.741 30.554 1.00 37.45 N
ATOM 21 C2 A B 55 12.006 40.464 30.251 1.00 36.95 C
ATOM 22 N3 A B 55 11.858 39.392 31.009 1.00 36.63 N
ATOM 23 C4 A B 55 11.467 39.758 32.251 1.00 37.60 C
ATOM 24 P A B 56 11.789 33.065 33.897 1.00 38.34 P
ATOM 25 OP1 A B 56 10.999 32.148 33.046 1.00 38.01 O
ATOM 26 OP2 A B 56 11.675 32.981 35.375 1.00 39.52 O
ATOM 27 O5' A B 56 13.333 32.872 33.505 1.00 36.29 O
TER
Atoms:
C4: (6.700,41.162,37.937)
N3: (6.694,40.676,36.642)
OP1: (4.453,48.478,38.068)
OP2: (5.590,46.542,39.301)
C2: (6.519,41.418,35.485)
C1': (6.062,43.626,34.430)
C3': (4.049,44.747,34.832)
O5': (5.220,46.442,36.832)
O4': (6.334,45.034,34.637)
C5': (5.036,46.933,35.497)
P: (5.469,47.401,38.098)
C4': (5.102,45.783,34.501)
C2': (4.568,43.553,34.062)
O2': (4.453,43.733,32.643)
N1: (6.328,42.791,35.655)
O4: (6.848,40.403,38.892)
O2: (6.538,40.858,34.390)
C6: (6.332,43.338,36.916)
C5: (6.506,42.589,38.025)
O3': (2.746,45.181,34.398)
N3: (6.694,40.676,36.642)
OP1: (4.453,48.478,38.068)
OP2: (5.590,46.542,39.301)
C2: (6.519,41.418,35.485)
C1': (6.062,43.626,34.430)
C3': (4.049,44.747,34.832)
O5': (5.220,46.442,36.832)
O4': (6.334,45.034,34.637)
C5': (5.036,46.933,35.497)
P: (5.469,47.401,38.098)
C4': (5.102,45.783,34.501)
C2': (4.568,43.553,34.062)
O2': (4.453,43.733,32.643)
N1: (6.328,42.791,35.655)
O4: (6.848,40.403,38.892)
O2: (6.538,40.858,34.390)
C6: (6.332,43.338,36.916)
C5: (6.506,42.589,38.025)
O3': (2.746,45.181,34.398)
OP1: (7.721,35.570,36.323)
OP2: (7.503,38.127,36.301)
C3': (10.767,35.441,34.317)
C1': (11.366,37.447,33.292)
C5': (8.424,35.724,33.429)
O4': (10.354,36.858,32.454)
C8: (10.850,39.753,34.348)
O2': (12.380,36.856,35.416)
C6: (11.436,42.068,31.794)
C5: (11.243,41.028,32.704)
C4: (11.467,39.758,32.251)
P: (7.321,36.819,35.630)
C4': (9.912,35.636,33.073)
C2': (11.158,36.851,34.669)
C2: (12.006,40.464,30.251)
N1: (11.824,41.741,30.554)
N3: (11.858,39.392,31.009)
N6: (11.246,43.346,32.117)
N7: (10.851,41.015,34.032)
N9: (11.217,38.921,33.316)
O5': (8.068,36.888,34.195)
O3': (11.910,34.669,33.951)
OP2: (7.503,38.127,36.301)
C3': (10.767,35.441,34.317)
C1': (11.366,37.447,33.292)
C5': (8.424,35.724,33.429)
O4': (10.354,36.858,32.454)
C8: (10.850,39.753,34.348)
O2': (12.380,36.856,35.416)
C6: (11.436,42.068,31.794)
C5: (11.243,41.028,32.704)
C4: (11.467,39.758,32.251)
P: (7.321,36.819,35.630)
C4': (9.912,35.636,33.073)
C2': (11.158,36.851,34.669)
C2: (12.006,40.464,30.251)
N1: (11.824,41.741,30.554)
N3: (11.858,39.392,31.009)
N6: (11.246,43.346,32.117)
N7: (10.851,41.015,34.032)
N9: (11.217,38.921,33.316)
O5': (8.068,36.888,34.195)
O3': (11.910,34.669,33.951)
Image (generated by PyMOL):