Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:0988:01233
Extra
PDB:
ATOM 1 O3' U A 987 19.065 72.305 71.350 1.00 70.87 O
ATOM 2 P U A 988 17.526 72.721 71.143 1.00 75.48 P
ATOM 3 OP1 U A 988 16.928 73.088 72.457 1.00 74.54 O
ATOM 4 OP2 U A 988 16.914 71.644 70.329 1.00 77.62 O
ATOM 5 O5' U A 988 17.583 74.035 70.242 1.00 76.01 O
ATOM 6 C5' U A 988 17.808 75.321 70.844 1.00 75.64 C
ATOM 7 C4' U A 988 17.381 76.437 69.913 1.00 73.95 C
ATOM 8 O4' U A 988 16.062 76.161 69.357 1.00 74.46 O
ATOM 9 C3' U A 988 17.259 77.780 70.622 1.00 73.23 C
ATOM 10 O3' U A 988 17.527 78.839 69.715 1.00 70.60 O
ATOM 11 C2' U A 988 15.784 77.806 70.999 1.00 74.99 C
ATOM 12 O2' U A 988 15.301 79.108 71.257 1.00 74.80 O
ATOM 13 C1' U A 988 15.155 77.178 69.753 1.00 75.88 C
ATOM 14 N1 U A 988 13.821 76.581 69.954 1.00 78.21 N
ATOM 15 C2 U A 988 12.702 77.385 69.727 1.00 79.45 C
ATOM 16 O2 U A 988 12.771 78.548 69.366 1.00 80.85 O
ATOM 17 N3 U A 988 11.494 76.772 69.940 1.00 80.57 N
ATOM 18 C4 U A 988 11.280 75.471 70.346 1.00 81.68 C
ATOM 19 O4 U A 988 10.122 75.071 70.499 1.00 82.52 O
ATOM 20 C5 U A 988 12.475 74.701 70.554 1.00 80.75 C
ATOM 21 C6 U A 988 13.672 75.267 70.357 1.00 79.32 C
ATOM 22 P U A 989 18.930 79.615 69.774 1.00 67.48 P
ATOM 23 OP1 U A 989 18.656 81.031 69.405 1.00 67.22 O
ATOM 24 OP2 U A 989 19.898 78.817 68.976 1.00 66.23 O
ATOM 25 O5' U A 989 19.387 79.550 71.300 1.00 65.27 O
TER
ATOM 1 O3' C B1232 9.824 79.551 71.161 1.00 60.28 O
ATOM 2 P A B1233 9.325 79.673 69.637 1.00 62.93 P
ATOM 3 OP1 A B1233 9.251 78.288 69.113 1.00 61.41 O
ATOM 4 OP2 A B1233 10.169 80.676 68.934 1.00 62.09 O
ATOM 5 O5' A B1233 7.850 80.271 69.764 1.00 59.84 O
ATOM 6 C5' A B1233 6.789 79.480 70.330 1.00 58.84 C
ATOM 7 C4' A B1233 5.471 80.214 70.255 1.00 59.21 C
ATOM 8 O4' A B1233 5.466 81.341 71.166 1.00 58.57 O
ATOM 9 C3' A B1233 5.104 80.832 68.920 1.00 60.80 C
ATOM 10 O3' A B1233 4.631 79.870 67.988 1.00 62.10 O
ATOM 11 C2' A B1233 4.050 81.850 69.333 1.00 60.20 C
ATOM 12 O2' A B1233 2.804 81.263 69.636 1.00 60.68 O
ATOM 13 C1' A B1233 4.651 82.378 70.636 1.00 59.75 C
ATOM 14 N9 A B1233 5.485 83.565 70.430 1.00 61.00 N
ATOM 15 C8 A B1233 6.840 83.614 70.188 1.00 61.23 C
ATOM 16 N7 A B1233 7.308 84.829 70.042 1.00 60.94 N
ATOM 17 C5 A B1233 6.191 85.637 70.194 1.00 59.81 C
ATOM 18 C6 A B1233 6.024 87.025 70.143 1.00 59.70 C
ATOM 19 N6 A B1233 7.021 87.878 69.909 1.00 59.93 N
ATOM 20 N1 A B1233 4.780 87.517 70.337 1.00 60.82 N
ATOM 21 C2 A B1233 3.779 86.658 70.562 1.00 60.07 C
ATOM 22 N3 A B1233 3.811 85.328 70.631 1.00 60.01 N
ATOM 23 C4 A B1233 5.061 84.874 70.435 1.00 60.58 C
ATOM 24 P C B1234 5.003 80.029 66.431 1.00 65.35 P
ATOM 25 OP1 C B1234 4.422 78.868 65.708 1.00 64.48 O
ATOM 26 OP2 C B1234 6.461 80.293 66.322 1.00 65.25 O
ATOM 27 O5' C B1234 4.214 81.348 66.007 1.00 63.05 O
TER
ATOM 2 P U A 988 17.526 72.721 71.143 1.00 75.48 P
ATOM 3 OP1 U A 988 16.928 73.088 72.457 1.00 74.54 O
ATOM 4 OP2 U A 988 16.914 71.644 70.329 1.00 77.62 O
ATOM 5 O5' U A 988 17.583 74.035 70.242 1.00 76.01 O
ATOM 6 C5' U A 988 17.808 75.321 70.844 1.00 75.64 C
ATOM 7 C4' U A 988 17.381 76.437 69.913 1.00 73.95 C
ATOM 8 O4' U A 988 16.062 76.161 69.357 1.00 74.46 O
ATOM 9 C3' U A 988 17.259 77.780 70.622 1.00 73.23 C
ATOM 10 O3' U A 988 17.527 78.839 69.715 1.00 70.60 O
ATOM 11 C2' U A 988 15.784 77.806 70.999 1.00 74.99 C
ATOM 12 O2' U A 988 15.301 79.108 71.257 1.00 74.80 O
ATOM 13 C1' U A 988 15.155 77.178 69.753 1.00 75.88 C
ATOM 14 N1 U A 988 13.821 76.581 69.954 1.00 78.21 N
ATOM 15 C2 U A 988 12.702 77.385 69.727 1.00 79.45 C
ATOM 16 O2 U A 988 12.771 78.548 69.366 1.00 80.85 O
ATOM 17 N3 U A 988 11.494 76.772 69.940 1.00 80.57 N
ATOM 18 C4 U A 988 11.280 75.471 70.346 1.00 81.68 C
ATOM 19 O4 U A 988 10.122 75.071 70.499 1.00 82.52 O
ATOM 20 C5 U A 988 12.475 74.701 70.554 1.00 80.75 C
ATOM 21 C6 U A 988 13.672 75.267 70.357 1.00 79.32 C
ATOM 22 P U A 989 18.930 79.615 69.774 1.00 67.48 P
ATOM 23 OP1 U A 989 18.656 81.031 69.405 1.00 67.22 O
ATOM 24 OP2 U A 989 19.898 78.817 68.976 1.00 66.23 O
ATOM 25 O5' U A 989 19.387 79.550 71.300 1.00 65.27 O
TER
ATOM 1 O3' C B1232 9.824 79.551 71.161 1.00 60.28 O
ATOM 2 P A B1233 9.325 79.673 69.637 1.00 62.93 P
ATOM 3 OP1 A B1233 9.251 78.288 69.113 1.00 61.41 O
ATOM 4 OP2 A B1233 10.169 80.676 68.934 1.00 62.09 O
ATOM 5 O5' A B1233 7.850 80.271 69.764 1.00 59.84 O
ATOM 6 C5' A B1233 6.789 79.480 70.330 1.00 58.84 C
ATOM 7 C4' A B1233 5.471 80.214 70.255 1.00 59.21 C
ATOM 8 O4' A B1233 5.466 81.341 71.166 1.00 58.57 O
ATOM 9 C3' A B1233 5.104 80.832 68.920 1.00 60.80 C
ATOM 10 O3' A B1233 4.631 79.870 67.988 1.00 62.10 O
ATOM 11 C2' A B1233 4.050 81.850 69.333 1.00 60.20 C
ATOM 12 O2' A B1233 2.804 81.263 69.636 1.00 60.68 O
ATOM 13 C1' A B1233 4.651 82.378 70.636 1.00 59.75 C
ATOM 14 N9 A B1233 5.485 83.565 70.430 1.00 61.00 N
ATOM 15 C8 A B1233 6.840 83.614 70.188 1.00 61.23 C
ATOM 16 N7 A B1233 7.308 84.829 70.042 1.00 60.94 N
ATOM 17 C5 A B1233 6.191 85.637 70.194 1.00 59.81 C
ATOM 18 C6 A B1233 6.024 87.025 70.143 1.00 59.70 C
ATOM 19 N6 A B1233 7.021 87.878 69.909 1.00 59.93 N
ATOM 20 N1 A B1233 4.780 87.517 70.337 1.00 60.82 N
ATOM 21 C2 A B1233 3.779 86.658 70.562 1.00 60.07 C
ATOM 22 N3 A B1233 3.811 85.328 70.631 1.00 60.01 N
ATOM 23 C4 A B1233 5.061 84.874 70.435 1.00 60.58 C
ATOM 24 P C B1234 5.003 80.029 66.431 1.00 65.35 P
ATOM 25 OP1 C B1234 4.422 78.868 65.708 1.00 64.48 O
ATOM 26 OP2 C B1234 6.461 80.293 66.322 1.00 65.25 O
ATOM 27 O5' C B1234 4.214 81.348 66.007 1.00 63.05 O
TER
Atoms:
C4: (11.280,75.471,70.346)
N3: (11.494,76.772,69.940)
OP1: (16.928,73.088,72.457)
OP2: (16.914,71.644,70.329)
C2: (12.702,77.385,69.727)
C1': (15.155,77.178,69.753)
C3': (17.259,77.780,70.622)
O5': (17.583,74.035,70.242)
O4': (16.062,76.161,69.357)
C5': (17.808,75.321,70.844)
P: (17.526,72.721,71.143)
C4': (17.381,76.437,69.913)
C2': (15.784,77.806,70.999)
O2': (15.301,79.108,71.257)
N1: (13.821,76.581,69.954)
O4: (10.122,75.071,70.499)
O2: (12.771,78.548,69.366)
C6: (13.672,75.267,70.357)
C5: (12.475,74.701,70.554)
O3': (17.527,78.839,69.715)
N3: (11.494,76.772,69.940)
OP1: (16.928,73.088,72.457)
OP2: (16.914,71.644,70.329)
C2: (12.702,77.385,69.727)
C1': (15.155,77.178,69.753)
C3': (17.259,77.780,70.622)
O5': (17.583,74.035,70.242)
O4': (16.062,76.161,69.357)
C5': (17.808,75.321,70.844)
P: (17.526,72.721,71.143)
C4': (17.381,76.437,69.913)
C2': (15.784,77.806,70.999)
O2': (15.301,79.108,71.257)
N1: (13.821,76.581,69.954)
O4: (10.122,75.071,70.499)
O2: (12.771,78.548,69.366)
C6: (13.672,75.267,70.357)
C5: (12.475,74.701,70.554)
O3': (17.527,78.839,69.715)
OP1: (9.251,78.288,69.113)
OP2: (10.169,80.676,68.934)
C3': (5.104,80.832,68.920)
C1': (4.651,82.378,70.636)
C5': (6.789,79.480,70.330)
O4': (5.466,81.341,71.166)
C8: (6.840,83.614,70.188)
O2': (2.804,81.263,69.636)
C6: (6.024,87.025,70.143)
C5: (6.191,85.637,70.194)
C4: (5.061,84.874,70.435)
P: (9.325,79.673,69.637)
C4': (5.471,80.214,70.255)
C2': (4.050,81.850,69.333)
C2: (3.779,86.658,70.562)
N1: (4.780,87.517,70.337)
N3: (3.811,85.328,70.631)
N6: (7.021,87.878,69.909)
N7: (7.308,84.829,70.042)
N9: (5.485,83.565,70.430)
O5': (7.850,80.271,69.764)
O3': (4.631,79.870,67.988)
OP2: (10.169,80.676,68.934)
C3': (5.104,80.832,68.920)
C1': (4.651,82.378,70.636)
C5': (6.789,79.480,70.330)
O4': (5.466,81.341,71.166)
C8: (6.840,83.614,70.188)
O2': (2.804,81.263,69.636)
C6: (6.024,87.025,70.143)
C5: (6.191,85.637,70.194)
C4: (5.061,84.874,70.435)
P: (9.325,79.673,69.637)
C4': (5.471,80.214,70.255)
C2': (4.050,81.850,69.333)
C2: (3.779,86.658,70.562)
N1: (4.780,87.517,70.337)
N3: (3.811,85.328,70.631)
N6: (7.021,87.878,69.909)
N7: (7.308,84.829,70.042)
N9: (5.485,83.565,70.430)
O5': (7.850,80.271,69.764)
O3': (4.631,79.870,67.988)
Image (generated by PyMOL):