Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:A48:A20
Extra
PDB:
ATOM 1 O3' G A 47 7.020 6.278 -39.699 1.00 51.76 O
ATOM 2 P U A 48 7.620 5.701 -41.075 1.00 55.98 P
ATOM 3 OP1 U A 48 9.075 5.510 -40.872 1.00 59.99 O
ATOM 4 OP2 U A 48 7.166 6.604 -42.159 1.00 63.72 O
ATOM 5 O5' U A 48 6.900 4.284 -41.214 1.00 55.96 O
ATOM 6 C5' U A 48 7.382 3.302 -42.131 1.00 61.23 C
ATOM 7 C4' U A 48 6.295 2.336 -42.545 1.00 63.05 C
ATOM 8 O4' U A 48 5.591 1.877 -41.359 1.00 58.64 O
ATOM 9 C3' U A 48 5.231 2.913 -43.475 1.00 65.34 C
ATOM 10 O3' U A 48 4.764 1.902 -44.378 1.00 67.56 O
ATOM 11 C2' U A 48 4.113 3.297 -42.510 1.00 63.62 C
ATOM 12 O2' U A 48 2.828 3.354 -43.094 1.00 62.47 O
ATOM 13 C1' U A 48 4.213 2.188 -41.465 1.00 59.19 C
ATOM 14 N1 U A 48 3.729 2.576 -40.122 1.00 51.00 N
ATOM 15 C2 U A 48 2.623 1.921 -39.616 1.00 49.84 C
ATOM 16 O2 U A 48 2.032 1.052 -40.233 1.00 51.25 O
ATOM 17 N3 U A 48 2.231 2.324 -38.363 1.00 50.02 N
ATOM 18 C4 U A 48 2.823 3.292 -37.577 1.00 47.52 C
ATOM 19 O4 U A 48 2.350 3.541 -36.466 1.00 46.06 O
ATOM 20 C5 U A 48 3.965 3.920 -38.169 1.00 44.05 C
ATOM 21 C6 U A 48 4.369 3.548 -39.389 1.00 47.30 C
ATOM 22 P A A 49 5.386 0.413 -44.363 1.00 74.52 P
ATOM 23 OP1 A A 49 4.803 -0.309 -45.519 1.00 71.51 O
ATOM 24 OP2 A A 49 5.176 -0.143 -43.005 1.00 69.82 O
ATOM 25 O5' A A 49 6.940 0.663 -44.614 1.00 64.06 O
TER
ATOM 1 O3' U B 19 0.966 -1.270 -36.995 1.00 54.72 O
ATOM 2 P A B 20 -0.403 -0.523 -36.606 1.00 50.62 P
ATOM 3 OP1 A B 20 -1.463 -1.558 -36.543 1.00 54.25 O
ATOM 4 OP2 A B 20 -0.568 0.609 -37.551 1.00 50.82 O
ATOM 5 O5' A B 20 -0.101 0.031 -35.146 1.00 47.83 O
ATOM 6 C5' A B 20 -0.584 -0.645 -33.991 1.00 47.13 C
ATOM 7 C4' A B 20 -0.499 0.227 -32.764 1.00 50.50 C
ATOM 8 O4' A B 20 0.897 0.526 -32.495 1.00 53.44 O
ATOM 9 C3' A B 20 -1.206 1.572 -32.880 1.00 49.07 C
ATOM 10 O3' A B 20 -1.699 1.962 -31.598 1.00 48.71 O
ATOM 11 C2' A B 20 -0.081 2.509 -33.309 1.00 46.25 C
ATOM 12 O2' A B 20 -0.289 3.868 -32.982 1.00 49.20 O
ATOM 13 C1' A B 20 1.119 1.923 -32.564 1.00 44.80 C
ATOM 14 N9 A B 20 2.404 2.140 -33.237 1.00 42.96 N
ATOM 15 C8 A B 20 2.900 1.461 -34.325 1.00 41.38 C
ATOM 16 N7 A B 20 4.087 1.863 -34.711 1.00 45.73 N
ATOM 17 C5 A B 20 4.401 2.877 -33.814 1.00 40.94 C
ATOM 18 C6 A B 20 5.524 3.714 -33.677 1.00 38.13 C
ATOM 19 N6 A B 20 6.595 3.670 -34.474 1.00 38.94 N
ATOM 20 N1 A B 20 5.515 4.618 -32.674 1.00 40.38 N
ATOM 21 C2 A B 20 4.448 4.674 -31.867 1.00 40.43 C
ATOM 22 N3 A B 20 3.337 3.944 -31.894 1.00 42.57 N
ATOM 23 C4 A B 20 3.375 3.054 -32.900 1.00 41.94 C
ATOM 24 P U B 21 -3.273 2.209 -31.382 1.00 60.82 P
ATOM 25 OP1 U B 21 -3.855 2.502 -32.715 1.00 58.24 O
ATOM 26 OP2 U B 21 -3.413 3.220 -30.306 1.00 55.62 O
ATOM 27 O5' U B 21 -3.792 0.794 -30.868 1.00 54.11 O
TER
ATOM 2 P U A 48 7.620 5.701 -41.075 1.00 55.98 P
ATOM 3 OP1 U A 48 9.075 5.510 -40.872 1.00 59.99 O
ATOM 4 OP2 U A 48 7.166 6.604 -42.159 1.00 63.72 O
ATOM 5 O5' U A 48 6.900 4.284 -41.214 1.00 55.96 O
ATOM 6 C5' U A 48 7.382 3.302 -42.131 1.00 61.23 C
ATOM 7 C4' U A 48 6.295 2.336 -42.545 1.00 63.05 C
ATOM 8 O4' U A 48 5.591 1.877 -41.359 1.00 58.64 O
ATOM 9 C3' U A 48 5.231 2.913 -43.475 1.00 65.34 C
ATOM 10 O3' U A 48 4.764 1.902 -44.378 1.00 67.56 O
ATOM 11 C2' U A 48 4.113 3.297 -42.510 1.00 63.62 C
ATOM 12 O2' U A 48 2.828 3.354 -43.094 1.00 62.47 O
ATOM 13 C1' U A 48 4.213 2.188 -41.465 1.00 59.19 C
ATOM 14 N1 U A 48 3.729 2.576 -40.122 1.00 51.00 N
ATOM 15 C2 U A 48 2.623 1.921 -39.616 1.00 49.84 C
ATOM 16 O2 U A 48 2.032 1.052 -40.233 1.00 51.25 O
ATOM 17 N3 U A 48 2.231 2.324 -38.363 1.00 50.02 N
ATOM 18 C4 U A 48 2.823 3.292 -37.577 1.00 47.52 C
ATOM 19 O4 U A 48 2.350 3.541 -36.466 1.00 46.06 O
ATOM 20 C5 U A 48 3.965 3.920 -38.169 1.00 44.05 C
ATOM 21 C6 U A 48 4.369 3.548 -39.389 1.00 47.30 C
ATOM 22 P A A 49 5.386 0.413 -44.363 1.00 74.52 P
ATOM 23 OP1 A A 49 4.803 -0.309 -45.519 1.00 71.51 O
ATOM 24 OP2 A A 49 5.176 -0.143 -43.005 1.00 69.82 O
ATOM 25 O5' A A 49 6.940 0.663 -44.614 1.00 64.06 O
TER
ATOM 1 O3' U B 19 0.966 -1.270 -36.995 1.00 54.72 O
ATOM 2 P A B 20 -0.403 -0.523 -36.606 1.00 50.62 P
ATOM 3 OP1 A B 20 -1.463 -1.558 -36.543 1.00 54.25 O
ATOM 4 OP2 A B 20 -0.568 0.609 -37.551 1.00 50.82 O
ATOM 5 O5' A B 20 -0.101 0.031 -35.146 1.00 47.83 O
ATOM 6 C5' A B 20 -0.584 -0.645 -33.991 1.00 47.13 C
ATOM 7 C4' A B 20 -0.499 0.227 -32.764 1.00 50.50 C
ATOM 8 O4' A B 20 0.897 0.526 -32.495 1.00 53.44 O
ATOM 9 C3' A B 20 -1.206 1.572 -32.880 1.00 49.07 C
ATOM 10 O3' A B 20 -1.699 1.962 -31.598 1.00 48.71 O
ATOM 11 C2' A B 20 -0.081 2.509 -33.309 1.00 46.25 C
ATOM 12 O2' A B 20 -0.289 3.868 -32.982 1.00 49.20 O
ATOM 13 C1' A B 20 1.119 1.923 -32.564 1.00 44.80 C
ATOM 14 N9 A B 20 2.404 2.140 -33.237 1.00 42.96 N
ATOM 15 C8 A B 20 2.900 1.461 -34.325 1.00 41.38 C
ATOM 16 N7 A B 20 4.087 1.863 -34.711 1.00 45.73 N
ATOM 17 C5 A B 20 4.401 2.877 -33.814 1.00 40.94 C
ATOM 18 C6 A B 20 5.524 3.714 -33.677 1.00 38.13 C
ATOM 19 N6 A B 20 6.595 3.670 -34.474 1.00 38.94 N
ATOM 20 N1 A B 20 5.515 4.618 -32.674 1.00 40.38 N
ATOM 21 C2 A B 20 4.448 4.674 -31.867 1.00 40.43 C
ATOM 22 N3 A B 20 3.337 3.944 -31.894 1.00 42.57 N
ATOM 23 C4 A B 20 3.375 3.054 -32.900 1.00 41.94 C
ATOM 24 P U B 21 -3.273 2.209 -31.382 1.00 60.82 P
ATOM 25 OP1 U B 21 -3.855 2.502 -32.715 1.00 58.24 O
ATOM 26 OP2 U B 21 -3.413 3.220 -30.306 1.00 55.62 O
ATOM 27 O5' U B 21 -3.792 0.794 -30.868 1.00 54.11 O
TER
Atoms:
C4: (2.823,3.292,-37.577)
N3: (2.231,2.324,-38.363)
OP1: (9.075,5.510,-40.872)
OP2: (7.166,6.604,-42.159)
C2: (2.623,1.921,-39.616)
C1': (4.213,2.188,-41.465)
C3': (5.231,2.913,-43.475)
O5': (6.900,4.284,-41.214)
O4': (5.591,1.877,-41.359)
C5': (7.382,3.302,-42.131)
P: (7.620,5.701,-41.075)
C4': (6.295,2.336,-42.545)
C2': (4.113,3.297,-42.510)
O2': (2.828,3.354,-43.094)
N1: (3.729,2.576,-40.122)
O4: (2.350,3.541,-36.466)
O2: (2.032,1.052,-40.233)
C6: (4.369,3.548,-39.389)
C5: (3.965,3.920,-38.169)
O3': (4.764,1.902,-44.378)
N3: (2.231,2.324,-38.363)
OP1: (9.075,5.510,-40.872)
OP2: (7.166,6.604,-42.159)
C2: (2.623,1.921,-39.616)
C1': (4.213,2.188,-41.465)
C3': (5.231,2.913,-43.475)
O5': (6.900,4.284,-41.214)
O4': (5.591,1.877,-41.359)
C5': (7.382,3.302,-42.131)
P: (7.620,5.701,-41.075)
C4': (6.295,2.336,-42.545)
C2': (4.113,3.297,-42.510)
O2': (2.828,3.354,-43.094)
N1: (3.729,2.576,-40.122)
O4: (2.350,3.541,-36.466)
O2: (2.032,1.052,-40.233)
C6: (4.369,3.548,-39.389)
C5: (3.965,3.920,-38.169)
O3': (4.764,1.902,-44.378)
OP1: (-1.463,-1.558,-36.543)
OP2: (-0.568,0.609,-37.551)
C3': (-1.206,1.572,-32.880)
C1': (1.119,1.923,-32.564)
C5': (-0.584,-0.645,-33.991)
O4': (0.897,0.526,-32.495)
C8: (2.900,1.461,-34.325)
O2': (-0.289,3.868,-32.982)
C6: (5.524,3.714,-33.677)
C5: (4.401,2.877,-33.814)
C4: (3.375,3.054,-32.900)
P: (-0.403,-0.523,-36.606)
C4': (-0.499,0.227,-32.764)
C2': (-0.081,2.509,-33.309)
C2: (4.448,4.674,-31.867)
N1: (5.515,4.618,-32.674)
N3: (3.337,3.944,-31.894)
N6: (6.595,3.670,-34.474)
N7: (4.087,1.863,-34.711)
N9: (2.404,2.140,-33.237)
O5': (-0.101,0.031,-35.146)
O3': (-1.699,1.962,-31.598)
OP2: (-0.568,0.609,-37.551)
C3': (-1.206,1.572,-32.880)
C1': (1.119,1.923,-32.564)
C5': (-0.584,-0.645,-33.991)
O4': (0.897,0.526,-32.495)
C8: (2.900,1.461,-34.325)
O2': (-0.289,3.868,-32.982)
C6: (5.524,3.714,-33.677)
C5: (4.401,2.877,-33.814)
C4: (3.375,3.054,-32.900)
P: (-0.403,-0.523,-36.606)
C4': (-0.499,0.227,-32.764)
C2': (-0.081,2.509,-33.309)
C2: (4.448,4.674,-31.867)
N1: (5.515,4.618,-32.674)
N3: (3.337,3.944,-31.894)
N6: (6.595,3.670,-34.474)
N7: (4.087,1.863,-34.711)
N9: (2.404,2.140,-33.237)
O5': (-0.101,0.031,-35.146)
O3': (-1.699,1.962,-31.598)
Image (generated by PyMOL):