Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:C48:C20
Extra
PDB:
ATOM 1 O3' G A 47 -1.546 -19.272 -83.890 1.00 77.04 O
ATOM 2 P U A 48 -0.757 -19.025 -85.271 1.00 78.07 P
ATOM 3 OP1 U A 48 0.217 -17.931 -85.030 1.00 72.50 O
ATOM 4 OP2 U A 48 -1.777 -18.846 -86.331 1.00 79.03 O
ATOM 5 O5' U A 48 0.016 -20.401 -85.492 1.00 77.32 O
ATOM 6 C5' U A 48 1.359 -20.420 -85.969 1.00 73.94 C
ATOM 7 C4' U A 48 1.836 -21.827 -86.251 1.00 77.67 C
ATOM 8 O4' U A 48 1.683 -22.630 -85.048 1.00 76.65 O
ATOM 9 C3' U A 48 1.076 -22.563 -87.353 1.00 81.36 C
ATOM 10 O3' U A 48 1.958 -23.448 -88.059 1.00 77.96 O
ATOM 11 C2' U A 48 0.057 -23.381 -86.567 1.00 82.24 C
ATOM 12 O2' U A 48 -0.417 -24.530 -87.238 1.00 83.18 O
ATOM 13 C1' U A 48 0.854 -23.746 -85.317 1.00 78.56 C
ATOM 14 N1 U A 48 0.022 -24.007 -84.117 1.00 77.28 N
ATOM 15 C2 U A 48 -0.179 -25.326 -83.756 1.00 78.53 C
ATOM 16 O2 U A 48 0.288 -26.258 -84.387 1.00 79.89 O
ATOM 17 N3 U A 48 -0.950 -25.519 -82.634 1.00 75.92 N
ATOM 18 C4 U A 48 -1.528 -24.546 -81.844 1.00 73.13 C
ATOM 19 O4 U A 48 -2.198 -24.878 -80.863 1.00 69.46 O
ATOM 20 C5 U A 48 -1.271 -23.205 -82.278 1.00 72.42 C
ATOM 21 C6 U A 48 -0.523 -22.988 -83.368 1.00 72.65 C
ATOM 22 P A A 49 3.556 -23.377 -87.852 1.00 89.06 P
ATOM 23 OP1 A A 49 4.158 -24.351 -88.794 1.00 92.30 O
ATOM 24 OP2 A A 49 3.823 -23.538 -86.400 1.00 83.83 O
ATOM 25 O5' A A 49 3.914 -21.896 -88.312 1.00 79.04 O
TER
ATOM 1 O3' U B 19 1.966 -28.548 -81.053 1.00 70.41 O
ATOM 2 P A B 20 0.557 -29.309 -80.899 1.00 66.95 P
ATOM 3 OP1 A B 20 0.851 -30.760 -80.829 1.00 61.16 O
ATOM 4 OP2 A B 20 -0.326 -28.815 -81.980 1.00 70.77 O
ATOM 5 O5' A B 20 0.027 -28.796 -79.489 1.00 66.65 O
ATOM 6 C5' A B 20 0.247 -29.554 -78.303 1.00 64.89 C
ATOM 7 C4' A B 20 -0.548 -29.011 -77.140 1.00 69.30 C
ATOM 8 O4' A B 20 -0.082 -27.670 -76.832 1.00 70.38 O
ATOM 9 C3' A B 20 -2.051 -28.894 -77.379 1.00 68.19 C
ATOM 10 O3' A B 20 -2.747 -29.119 -76.155 1.00 72.88 O
ATOM 11 C2' A B 20 -2.212 -27.437 -77.793 1.00 68.17 C
ATOM 12 O2' A B 20 -3.498 -26.901 -77.567 1.00 72.04 O
ATOM 13 C1' A B 20 -1.155 -26.753 -76.933 1.00 66.15 C
ATOM 14 N9 A B 20 -0.640 -25.513 -77.513 1.00 64.79 N
ATOM 15 C8 A B 20 0.379 -25.381 -78.423 1.00 66.11 C
ATOM 16 N7 A B 20 0.611 -24.141 -78.770 1.00 65.48 N
ATOM 17 C5 A B 20 -0.319 -23.413 -78.042 1.00 60.52 C
ATOM 18 C6 A B 20 -0.585 -22.037 -77.969 1.00 60.40 C
ATOM 19 N6 A B 20 0.092 -21.121 -78.664 1.00 61.34 N
ATOM 20 N1 A B 20 -1.579 -21.634 -77.147 1.00 62.69 N
ATOM 21 C2 A B 20 -2.252 -22.560 -76.451 1.00 63.16 C
ATOM 22 N3 A B 20 -2.094 -23.881 -76.437 1.00 62.74 N
ATOM 23 C4 A B 20 -1.099 -24.245 -77.263 1.00 61.61 C
ATOM 24 P U B 21 -3.685 -30.413 -75.991 1.00 88.85 P
ATOM 25 OP1 U B 21 -4.268 -30.703 -77.323 1.00 82.79 O
ATOM 26 OP2 U B 21 -4.601 -30.147 -74.854 1.00 81.38 O
ATOM 27 O5' U B 21 -2.646 -31.551 -75.595 1.00 76.70 O
TER
ATOM 2 P U A 48 -0.757 -19.025 -85.271 1.00 78.07 P
ATOM 3 OP1 U A 48 0.217 -17.931 -85.030 1.00 72.50 O
ATOM 4 OP2 U A 48 -1.777 -18.846 -86.331 1.00 79.03 O
ATOM 5 O5' U A 48 0.016 -20.401 -85.492 1.00 77.32 O
ATOM 6 C5' U A 48 1.359 -20.420 -85.969 1.00 73.94 C
ATOM 7 C4' U A 48 1.836 -21.827 -86.251 1.00 77.67 C
ATOM 8 O4' U A 48 1.683 -22.630 -85.048 1.00 76.65 O
ATOM 9 C3' U A 48 1.076 -22.563 -87.353 1.00 81.36 C
ATOM 10 O3' U A 48 1.958 -23.448 -88.059 1.00 77.96 O
ATOM 11 C2' U A 48 0.057 -23.381 -86.567 1.00 82.24 C
ATOM 12 O2' U A 48 -0.417 -24.530 -87.238 1.00 83.18 O
ATOM 13 C1' U A 48 0.854 -23.746 -85.317 1.00 78.56 C
ATOM 14 N1 U A 48 0.022 -24.007 -84.117 1.00 77.28 N
ATOM 15 C2 U A 48 -0.179 -25.326 -83.756 1.00 78.53 C
ATOM 16 O2 U A 48 0.288 -26.258 -84.387 1.00 79.89 O
ATOM 17 N3 U A 48 -0.950 -25.519 -82.634 1.00 75.92 N
ATOM 18 C4 U A 48 -1.528 -24.546 -81.844 1.00 73.13 C
ATOM 19 O4 U A 48 -2.198 -24.878 -80.863 1.00 69.46 O
ATOM 20 C5 U A 48 -1.271 -23.205 -82.278 1.00 72.42 C
ATOM 21 C6 U A 48 -0.523 -22.988 -83.368 1.00 72.65 C
ATOM 22 P A A 49 3.556 -23.377 -87.852 1.00 89.06 P
ATOM 23 OP1 A A 49 4.158 -24.351 -88.794 1.00 92.30 O
ATOM 24 OP2 A A 49 3.823 -23.538 -86.400 1.00 83.83 O
ATOM 25 O5' A A 49 3.914 -21.896 -88.312 1.00 79.04 O
TER
ATOM 1 O3' U B 19 1.966 -28.548 -81.053 1.00 70.41 O
ATOM 2 P A B 20 0.557 -29.309 -80.899 1.00 66.95 P
ATOM 3 OP1 A B 20 0.851 -30.760 -80.829 1.00 61.16 O
ATOM 4 OP2 A B 20 -0.326 -28.815 -81.980 1.00 70.77 O
ATOM 5 O5' A B 20 0.027 -28.796 -79.489 1.00 66.65 O
ATOM 6 C5' A B 20 0.247 -29.554 -78.303 1.00 64.89 C
ATOM 7 C4' A B 20 -0.548 -29.011 -77.140 1.00 69.30 C
ATOM 8 O4' A B 20 -0.082 -27.670 -76.832 1.00 70.38 O
ATOM 9 C3' A B 20 -2.051 -28.894 -77.379 1.00 68.19 C
ATOM 10 O3' A B 20 -2.747 -29.119 -76.155 1.00 72.88 O
ATOM 11 C2' A B 20 -2.212 -27.437 -77.793 1.00 68.17 C
ATOM 12 O2' A B 20 -3.498 -26.901 -77.567 1.00 72.04 O
ATOM 13 C1' A B 20 -1.155 -26.753 -76.933 1.00 66.15 C
ATOM 14 N9 A B 20 -0.640 -25.513 -77.513 1.00 64.79 N
ATOM 15 C8 A B 20 0.379 -25.381 -78.423 1.00 66.11 C
ATOM 16 N7 A B 20 0.611 -24.141 -78.770 1.00 65.48 N
ATOM 17 C5 A B 20 -0.319 -23.413 -78.042 1.00 60.52 C
ATOM 18 C6 A B 20 -0.585 -22.037 -77.969 1.00 60.40 C
ATOM 19 N6 A B 20 0.092 -21.121 -78.664 1.00 61.34 N
ATOM 20 N1 A B 20 -1.579 -21.634 -77.147 1.00 62.69 N
ATOM 21 C2 A B 20 -2.252 -22.560 -76.451 1.00 63.16 C
ATOM 22 N3 A B 20 -2.094 -23.881 -76.437 1.00 62.74 N
ATOM 23 C4 A B 20 -1.099 -24.245 -77.263 1.00 61.61 C
ATOM 24 P U B 21 -3.685 -30.413 -75.991 1.00 88.85 P
ATOM 25 OP1 U B 21 -4.268 -30.703 -77.323 1.00 82.79 O
ATOM 26 OP2 U B 21 -4.601 -30.147 -74.854 1.00 81.38 O
ATOM 27 O5' U B 21 -2.646 -31.551 -75.595 1.00 76.70 O
TER
Atoms:
C4: (-1.528,-24.546,-81.844)
N3: (-0.950,-25.519,-82.634)
OP1: (0.217,-17.931,-85.030)
OP2: (-1.777,-18.846,-86.331)
C2: (-0.179,-25.326,-83.756)
C1': (0.854,-23.746,-85.317)
C3': (1.076,-22.563,-87.353)
O5': (0.016,-20.401,-85.492)
O4': (1.683,-22.630,-85.048)
C5': (1.359,-20.420,-85.969)
P: (-0.757,-19.025,-85.271)
C4': (1.836,-21.827,-86.251)
C2': (0.057,-23.381,-86.567)
O2': (-0.417,-24.530,-87.238)
N1: (0.022,-24.007,-84.117)
O4: (-2.198,-24.878,-80.863)
O2: (0.288,-26.258,-84.387)
C6: (-0.523,-22.988,-83.368)
C5: (-1.271,-23.205,-82.278)
O3': (1.958,-23.448,-88.059)
N3: (-0.950,-25.519,-82.634)
OP1: (0.217,-17.931,-85.030)
OP2: (-1.777,-18.846,-86.331)
C2: (-0.179,-25.326,-83.756)
C1': (0.854,-23.746,-85.317)
C3': (1.076,-22.563,-87.353)
O5': (0.016,-20.401,-85.492)
O4': (1.683,-22.630,-85.048)
C5': (1.359,-20.420,-85.969)
P: (-0.757,-19.025,-85.271)
C4': (1.836,-21.827,-86.251)
C2': (0.057,-23.381,-86.567)
O2': (-0.417,-24.530,-87.238)
N1: (0.022,-24.007,-84.117)
O4: (-2.198,-24.878,-80.863)
O2: (0.288,-26.258,-84.387)
C6: (-0.523,-22.988,-83.368)
C5: (-1.271,-23.205,-82.278)
O3': (1.958,-23.448,-88.059)
OP1: (0.851,-30.760,-80.829)
OP2: (-0.326,-28.815,-81.980)
C3': (-2.051,-28.894,-77.379)
C1': (-1.155,-26.753,-76.933)
C5': (0.247,-29.554,-78.303)
O4': (-0.082,-27.670,-76.832)
C8: (0.379,-25.381,-78.423)
O2': (-3.498,-26.901,-77.567)
C6: (-0.585,-22.037,-77.969)
C5: (-0.319,-23.413,-78.042)
C4: (-1.099,-24.245,-77.263)
P: (0.557,-29.309,-80.899)
C4': (-0.548,-29.011,-77.140)
C2': (-2.212,-27.437,-77.793)
C2: (-2.252,-22.560,-76.451)
N1: (-1.579,-21.634,-77.147)
N3: (-2.094,-23.881,-76.437)
N6: (0.092,-21.121,-78.664)
N7: (0.611,-24.141,-78.770)
N9: (-0.640,-25.513,-77.513)
O5': (0.027,-28.796,-79.489)
O3': (-2.747,-29.119,-76.155)
OP2: (-0.326,-28.815,-81.980)
C3': (-2.051,-28.894,-77.379)
C1': (-1.155,-26.753,-76.933)
C5': (0.247,-29.554,-78.303)
O4': (-0.082,-27.670,-76.832)
C8: (0.379,-25.381,-78.423)
O2': (-3.498,-26.901,-77.567)
C6: (-0.585,-22.037,-77.969)
C5: (-0.319,-23.413,-78.042)
C4: (-1.099,-24.245,-77.263)
P: (0.557,-29.309,-80.899)
C4': (-0.548,-29.011,-77.140)
C2': (-2.212,-27.437,-77.793)
C2: (-2.252,-22.560,-76.451)
N1: (-1.579,-21.634,-77.147)
N3: (-2.094,-23.881,-76.437)
N6: (0.092,-21.121,-78.664)
N7: (0.611,-24.141,-78.770)
N9: (-0.640,-25.513,-77.513)
O5': (0.027,-28.796,-79.489)
O3': (-2.747,-29.119,-76.155)
Image (generated by PyMOL):