ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3RG5:A35:A38

Extra

PDB:
ATOM 1 O3' U A 34 37.191 -24.317 -7.029 1.00 41.76 O
ATOM 2 P U A 35 37.290 -24.639 -8.593 1.00 39.99 P
ATOM 3 OP1 U A 35 38.316 -25.697 -8.709 1.00 42.78 O
ATOM 4 OP2 U A 35 37.404 -23.407 -9.380 1.00 43.82 O
ATOM 5 O5' U A 35 35.868 -25.223 -9.012 1.00 42.03 O
ATOM 6 C5' U A 35 35.465 -26.514 -8.564 1.00 39.57 C
ATOM 7 C4' U A 35 34.045 -26.770 -9.042 1.00 38.20 C
ATOM 8 O4' U A 35 33.086 -25.778 -8.563 1.00 36.58 O
ATOM 9 C3' U A 35 33.883 -26.690 -10.553 1.00 39.02 C
ATOM 10 O3' U A 35 34.548 -27.773 -11.201 1.00 41.27 O
ATOM 11 C2' U A 35 32.354 -26.648 -10.669 1.00 37.01 C
ATOM 12 O2' U A 35 31.702 -27.883 -10.565 1.00 38.15 O
ATOM 13 C1' U A 35 31.985 -25.741 -9.474 1.00 37.35 C
ATOM 14 N1 U A 35 31.716 -24.336 -10.001 1.00 36.75 N
ATOM 15 C2 U A 35 30.459 -24.035 -10.516 1.00 36.88 C
ATOM 16 O2 U A 35 29.515 -24.817 -10.545 1.00 34.30 O
ATOM 17 N3 U A 35 30.333 -22.749 -11.004 1.00 39.11 N
ATOM 18 C4 U A 35 31.317 -21.769 -11.044 1.00 38.77 C
ATOM 19 O4 U A 35 31.040 -20.679 -11.501 1.00 38.11 O
ATOM 20 C5 U A 35 32.607 -22.150 -10.515 1.00 39.36 C
ATOM 21 C6 U A 35 32.748 -23.402 -10.028 1.00 38.21 C
ATOM 22 P C A 36 35.357 -27.563 -12.578 1.00 42.34 P
ATOM 23 OP1 C A 36 35.925 -28.873 -12.953 1.00 43.96 O
ATOM 24 OP2 C A 36 36.219 -26.355 -12.514 1.00 41.83 O
ATOM 25 O5' C A 36 34.191 -27.284 -13.608 1.00 40.80 O
TER

ATOM 1 O3' A B 37 26.539 -22.950 -13.660 1.00 42.05 O
ATOM 2 P A B 38 26.542 -21.827 -12.513 1.00 43.87 P
ATOM 3 OP1 A B 38 25.938 -20.655 -13.189 1.00 46.40 O
ATOM 4 OP2 A B 38 27.851 -21.703 -11.855 1.00 40.15 O
ATOM 5 O5' A B 38 25.557 -22.354 -11.389 1.00 43.37 O
ATOM 6 C5' A B 38 24.209 -22.721 -11.692 1.00 44.02 C
ATOM 7 C4' A B 38 23.688 -23.668 -10.622 1.00 43.12 C
ATOM 8 O4' A B 38 24.561 -24.833 -10.576 1.00 42.55 O
ATOM 9 C3' A B 38 23.695 -23.153 -9.191 1.00 42.28 C
ATOM 10 O3' A B 38 22.528 -22.373 -8.927 1.00 45.25 O
ATOM 11 C2' A B 38 23.675 -24.471 -8.414 1.00 40.34 C
ATOM 12 O2' A B 38 22.376 -24.995 -8.241 1.00 40.64 O
ATOM 13 C1' A B 38 24.487 -25.414 -9.299 1.00 38.13 C
ATOM 14 N9 A B 38 25.795 -25.698 -8.682 1.00 36.19 N
ATOM 15 C8 A B 38 26.194 -26.937 -8.248 1.00 34.74 C
ATOM 16 N7 A B 38 27.369 -26.956 -7.691 1.00 32.57 N
ATOM 17 C5 A B 38 27.784 -25.626 -7.745 1.00 32.37 C
ATOM 18 C6 A B 38 28.949 -24.981 -7.301 1.00 32.23 C
ATOM 19 N6 A B 38 29.953 -25.626 -6.697 1.00 31.83 N
ATOM 20 N1 A B 38 29.057 -23.635 -7.481 1.00 33.86 N
ATOM 21 C2 A B 38 28.037 -22.979 -8.082 1.00 32.33 C
ATOM 22 N3 A B 38 26.891 -23.488 -8.542 1.00 30.23 N
ATOM 23 C4 A B 38 26.818 -24.825 -8.334 1.00 33.38 C
ATOM 24 P A B 39 22.508 -21.244 -7.776 1.00 48.08 P
ATOM 25 OP1 A B 39 21.139 -20.688 -7.697 1.00 49.38 O
ATOM 26 OP2 A B 39 23.653 -20.350 -8.043 1.00 47.14 O
ATOM 27 O5' A B 39 22.678 -22.024 -6.412 1.00 46.98 O
TER

Atoms:
C4: (31.317,-21.769,-11.044)
N3: (30.333,-22.749,-11.004)
OP1: (38.316,-25.697,-8.709)
OP2: (37.404,-23.407,-9.380)
C2: (30.459,-24.035,-10.516)
C1': (31.985,-25.741,-9.474)
C3': (33.883,-26.690,-10.553)
O5': (35.868,-25.223,-9.012)
O4': (33.086,-25.778,-8.563)
C5': (35.465,-26.514,-8.564)
P: (37.290,-24.639,-8.593)
C4': (34.045,-26.770,-9.042)
C2': (32.354,-26.648,-10.669)
O2': (31.702,-27.883,-10.565)
N1: (31.716,-24.336,-10.001)
O4: (31.040,-20.679,-11.501)
O2: (29.515,-24.817,-10.545)
C6: (32.748,-23.402,-10.028)
C5: (32.607,-22.150,-10.515)
O3': (34.548,-27.773,-11.201)
OP1: (25.938,-20.655,-13.189)
OP2: (27.851,-21.703,-11.855)
C3': (23.695,-23.153,-9.191)
C1': (24.487,-25.414,-9.299)
C5': (24.209,-22.721,-11.692)
O4': (24.561,-24.833,-10.576)
C8: (26.194,-26.937,-8.248)
O2': (22.376,-24.995,-8.241)
C6: (28.949,-24.981,-7.301)
C5: (27.784,-25.626,-7.745)
C4: (26.818,-24.825,-8.334)
P: (26.542,-21.827,-12.513)
C4': (23.688,-23.668,-10.622)
C2': (23.675,-24.471,-8.414)
C2: (28.037,-22.979,-8.082)
N1: (29.057,-23.635,-7.481)
N3: (26.891,-23.488,-8.542)
N6: (29.953,-25.626,-6.697)
N7: (27.369,-26.956,-7.691)
N9: (25.795,-25.698,-8.682)
O5': (25.557,-22.354,-11.389)
O3': (22.528,-22.373,-8.927)
Image (generated by PyMOL):
PyMOL image
show in jmol