ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ4:0988:01233

Extra

PDB:
ATOM 1 O3' U A 987 19.704 72.964 71.759 1.00 68.70 O
ATOM 2 P U A 988 18.158 73.229 71.413 1.00 71.19 P
ATOM 3 OP1 U A 988 17.408 73.565 72.650 1.00 68.91 O
ATOM 4 OP2 U A 988 17.745 72.066 70.590 1.00 73.27 O
ATOM 5 O5' U A 988 18.175 74.526 70.490 1.00 70.42 O
ATOM 6 C5' U A 988 18.461 75.807 71.061 1.00 69.61 C
ATOM 7 C4' U A 988 17.962 76.919 70.169 1.00 68.28 C
ATOM 8 O4' U A 988 16.638 76.606 69.639 1.00 68.56 O
ATOM 9 C3' U A 988 17.808 78.233 70.925 1.00 67.80 C
ATOM 10 O3' U A 988 18.038 79.340 70.062 1.00 65.20 O
ATOM 11 C2' U A 988 16.339 78.192 71.323 1.00 68.74 C
ATOM 12 O2' U A 988 15.805 79.452 71.663 1.00 67.99 O
ATOM 13 C1' U A 988 15.720 77.603 70.055 1.00 69.56 C
ATOM 14 N1 U A 988 14.382 77.004 70.216 1.00 71.62 N
ATOM 15 C2 U A 988 13.276 77.846 70.093 1.00 73.25 C
ATOM 16 O2 U A 988 13.363 79.039 69.838 1.00 73.41 O
ATOM 17 N3 U A 988 12.059 77.238 70.279 1.00 74.74 N
ATOM 18 C4 U A 988 11.826 75.907 70.568 1.00 75.48 C
ATOM 19 O4 U A 988 10.664 75.518 70.723 1.00 76.65 O
ATOM 20 C5 U A 988 13.009 75.097 70.658 1.00 73.72 C
ATOM 21 C6 U A 988 14.215 75.657 70.485 1.00 72.53 C
ATOM 22 P U A 989 19.472 80.055 70.047 1.00 62.76 P
ATOM 23 OP1 U A 989 19.265 81.464 69.621 1.00 64.88 O
ATOM 24 OP2 U A 989 20.385 79.178 69.269 1.00 62.33 O
ATOM 25 O5' U A 989 19.955 80.043 71.566 1.00 61.81 O
TER

ATOM 1 O3' C B1232 10.572 79.984 71.344 1.00 58.58 O
ATOM 2 P A B1233 9.959 80.125 69.872 1.00 59.61 P
ATOM 3 OP1 A B1233 9.855 78.748 69.336 1.00 59.45 O
ATOM 4 OP2 A B1233 10.709 81.152 69.119 1.00 60.46 O
ATOM 5 O5' A B1233 8.498 80.697 70.121 1.00 58.84 O
ATOM 6 C5' A B1233 7.475 79.868 70.685 1.00 56.45 C
ATOM 7 C4' A B1233 6.153 80.585 70.661 1.00 55.74 C
ATOM 8 O4' A B1233 6.206 81.727 71.553 1.00 56.51 O
ATOM 9 C3' A B1233 5.755 81.204 69.335 1.00 56.79 C
ATOM 10 O3' A B1233 5.255 80.251 68.417 1.00 58.24 O
ATOM 11 C2' A B1233 4.712 82.218 69.779 1.00 57.37 C
ATOM 12 O2' A B1233 3.488 81.605 70.138 1.00 55.75 O
ATOM 13 C1' A B1233 5.373 82.764 71.047 1.00 57.41 C
ATOM 14 N9 A B1233 6.197 83.953 70.799 1.00 57.25 N
ATOM 15 C8 A B1233 7.551 84.026 70.563 1.00 56.70 C
ATOM 16 N7 A B1233 7.991 85.249 70.378 1.00 56.12 N
ATOM 17 C5 A B1233 6.852 86.034 70.497 1.00 55.08 C
ATOM 18 C6 A B1233 6.644 87.418 70.402 1.00 54.70 C
ATOM 19 N6 A B1233 7.610 88.298 70.147 1.00 55.72 N
ATOM 20 N1 A B1233 5.389 87.877 70.573 1.00 55.39 N
ATOM 21 C2 A B1233 4.413 86.997 70.816 1.00 55.46 C
ATOM 22 N3 A B1233 4.479 85.675 70.927 1.00 55.37 N
ATOM 23 C4 A B1233 5.741 85.250 70.756 1.00 55.92 C
ATOM 24 P C B1234 5.597 80.406 66.856 1.00 58.95 P
ATOM 25 OP1 C B1234 5.036 79.223 66.159 1.00 58.68 O
ATOM 26 OP2 C B1234 7.039 80.723 66.713 1.00 59.07 O
ATOM 27 O5' C B1234 4.766 81.690 66.415 1.00 59.95 O
TER

Atoms:
C4: (11.826,75.907,70.568)
N3: (12.059,77.238,70.279)
OP1: (17.408,73.565,72.650)
OP2: (17.745,72.066,70.590)
C2: (13.276,77.846,70.093)
C1': (15.720,77.603,70.055)
C3': (17.808,78.233,70.925)
O5': (18.175,74.526,70.490)
O4': (16.638,76.606,69.639)
C5': (18.461,75.807,71.061)
P: (18.158,73.229,71.413)
C4': (17.962,76.919,70.169)
C2': (16.339,78.192,71.323)
O2': (15.805,79.452,71.663)
N1: (14.382,77.004,70.216)
O4: (10.664,75.518,70.723)
O2: (13.363,79.039,69.838)
C6: (14.215,75.657,70.485)
C5: (13.009,75.097,70.658)
O3': (18.038,79.340,70.062)
OP1: (9.855,78.748,69.336)
OP2: (10.709,81.152,69.119)
C3': (5.755,81.204,69.335)
C1': (5.373,82.764,71.047)
C5': (7.475,79.868,70.685)
O4': (6.206,81.727,71.553)
C8: (7.551,84.026,70.563)
O2': (3.488,81.605,70.138)
C6: (6.644,87.418,70.402)
C5: (6.852,86.034,70.497)
C4: (5.741,85.250,70.756)
P: (9.959,80.125,69.872)
C4': (6.153,80.585,70.661)
C2': (4.712,82.218,69.779)
C2: (4.413,86.997,70.816)
N1: (5.389,87.877,70.573)
N3: (4.479,85.675,70.927)
N6: (7.610,88.298,70.147)
N7: (7.991,85.249,70.378)
N9: (6.197,83.953,70.799)
O5': (8.498,80.697,70.121)
O3': (5.255,80.251,68.417)
Image (generated by PyMOL):
PyMOL image
show in jmol