Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01318:02047
Extra
PDB:
ATOM 1 O3' A A1317 49.828 121.213 78.752 1.00 32.24 O
ATOM 2 P U A1318 50.948 122.356 78.724 1.00 33.12 P
ATOM 3 OP1 U A1318 51.411 122.555 77.328 1.00 33.19 O
ATOM 4 OP2 U A1318 51.913 121.925 79.772 1.00 31.88 O
ATOM 5 O5' U A1318 50.220 123.696 79.182 1.00 31.91 O
ATOM 6 C5' U A1318 49.713 123.858 80.520 1.00 33.64 C
ATOM 7 C4' U A1318 50.448 124.975 81.233 1.00 34.57 C
ATOM 8 O4' U A1318 51.796 124.563 81.540 1.00 35.00 O
ATOM 9 C3' U A1318 50.687 126.250 80.443 1.00 34.84 C
ATOM 10 O3' U A1318 49.522 127.058 80.458 1.00 34.59 O
ATOM 11 C2' U A1318 51.805 126.925 81.234 1.00 34.90 C
ATOM 12 O2' U A1318 51.306 127.686 82.312 1.00 36.57 O
ATOM 13 C1' U A1318 52.563 125.721 81.803 1.00 34.45 C
ATOM 14 N1 U A1318 53.952 125.512 81.358 1.00 34.03 N
ATOM 15 C2 U A1318 54.908 126.394 81.829 1.00 33.25 C
ATOM 16 O2 U A1318 54.633 127.358 82.523 1.00 34.46 O
ATOM 17 N3 U A1318 56.195 126.107 81.457 1.00 30.79 N
ATOM 18 C4 U A1318 56.615 125.062 80.677 1.00 30.09 C
ATOM 19 O4 U A1318 57.820 124.872 80.525 1.00 28.50 O
ATOM 20 C5 U A1318 55.569 124.223 80.194 1.00 30.82 C
ATOM 21 C6 U A1318 54.307 124.469 80.540 1.00 31.99 C
ATOM 22 P C A1319 49.161 127.958 79.187 1.00 32.79 P
ATOM 23 OP1 C A1319 50.081 129.115 79.181 1.00 34.43 O
ATOM 24 OP2 C A1319 47.701 128.181 79.248 1.00 31.39 O
ATOM 25 O5' C A1319 49.501 127.038 77.934 1.00 31.37 O
TER
ATOM 1 O3' A B2046 59.963 127.970 84.600 1.00 47.86 O
ATOM 2 P A B2047 58.534 127.469 84.051 1.00 45.13 P
ATOM 3 OP1 A B2047 58.593 127.591 82.574 1.00 45.69 O
ATOM 4 OP2 A B2047 57.446 128.152 84.794 1.00 47.15 O
ATOM 5 O5' A B2047 58.482 125.920 84.434 1.00 46.55 O
ATOM 6 C5' A B2047 59.439 124.985 83.890 1.00 45.73 C
ATOM 7 C4' A B2047 59.357 123.656 84.610 1.00 45.08 C
ATOM 8 O4' A B2047 58.117 122.967 84.249 1.00 43.16 O
ATOM 9 C3' A B2047 60.483 122.684 84.253 1.00 45.41 C
ATOM 10 O3' A B2047 60.870 121.913 85.393 1.00 48.56 O
ATOM 11 C2' A B2047 59.817 121.770 83.238 1.00 44.20 C
ATOM 12 O2' A B2047 60.443 120.513 83.081 1.00 41.97 O
ATOM 13 C1' A B2047 58.427 121.649 83.848 1.00 43.65 C
ATOM 14 N9 A B2047 57.443 121.162 82.884 1.00 45.37 N
ATOM 15 C8 A B2047 56.859 121.816 81.829 1.00 45.93 C
ATOM 16 N7 A B2047 56.099 121.046 81.086 1.00 45.57 N
ATOM 17 C5 A B2047 56.169 119.807 81.709 1.00 44.13 C
ATOM 18 C6 A B2047 55.612 118.562 81.398 1.00 43.23 C
ATOM 19 N6 A B2047 54.875 118.330 80.314 1.00 43.23 N
ATOM 20 N1 A B2047 55.858 117.539 82.237 1.00 43.68 N
ATOM 21 C2 A B2047 56.636 117.753 83.299 1.00 43.17 C
ATOM 22 N3 A B2047 57.240 118.866 83.684 1.00 43.83 N
ATOM 23 C4 A B2047 56.964 119.872 82.836 1.00 44.71 C
ATOM 24 P G B2048 62.422 121.550 85.614 1.00 50.05 P
ATOM 25 OP1 G B2048 63.138 122.844 85.744 1.00 52.95 O
ATOM 26 OP2 G B2048 62.858 120.577 84.572 1.00 48.57 O
ATOM 27 O5' G B2048 62.458 120.807 87.022 1.00 48.32 O
TER
ATOM 2 P U A1318 50.948 122.356 78.724 1.00 33.12 P
ATOM 3 OP1 U A1318 51.411 122.555 77.328 1.00 33.19 O
ATOM 4 OP2 U A1318 51.913 121.925 79.772 1.00 31.88 O
ATOM 5 O5' U A1318 50.220 123.696 79.182 1.00 31.91 O
ATOM 6 C5' U A1318 49.713 123.858 80.520 1.00 33.64 C
ATOM 7 C4' U A1318 50.448 124.975 81.233 1.00 34.57 C
ATOM 8 O4' U A1318 51.796 124.563 81.540 1.00 35.00 O
ATOM 9 C3' U A1318 50.687 126.250 80.443 1.00 34.84 C
ATOM 10 O3' U A1318 49.522 127.058 80.458 1.00 34.59 O
ATOM 11 C2' U A1318 51.805 126.925 81.234 1.00 34.90 C
ATOM 12 O2' U A1318 51.306 127.686 82.312 1.00 36.57 O
ATOM 13 C1' U A1318 52.563 125.721 81.803 1.00 34.45 C
ATOM 14 N1 U A1318 53.952 125.512 81.358 1.00 34.03 N
ATOM 15 C2 U A1318 54.908 126.394 81.829 1.00 33.25 C
ATOM 16 O2 U A1318 54.633 127.358 82.523 1.00 34.46 O
ATOM 17 N3 U A1318 56.195 126.107 81.457 1.00 30.79 N
ATOM 18 C4 U A1318 56.615 125.062 80.677 1.00 30.09 C
ATOM 19 O4 U A1318 57.820 124.872 80.525 1.00 28.50 O
ATOM 20 C5 U A1318 55.569 124.223 80.194 1.00 30.82 C
ATOM 21 C6 U A1318 54.307 124.469 80.540 1.00 31.99 C
ATOM 22 P C A1319 49.161 127.958 79.187 1.00 32.79 P
ATOM 23 OP1 C A1319 50.081 129.115 79.181 1.00 34.43 O
ATOM 24 OP2 C A1319 47.701 128.181 79.248 1.00 31.39 O
ATOM 25 O5' C A1319 49.501 127.038 77.934 1.00 31.37 O
TER
ATOM 1 O3' A B2046 59.963 127.970 84.600 1.00 47.86 O
ATOM 2 P A B2047 58.534 127.469 84.051 1.00 45.13 P
ATOM 3 OP1 A B2047 58.593 127.591 82.574 1.00 45.69 O
ATOM 4 OP2 A B2047 57.446 128.152 84.794 1.00 47.15 O
ATOM 5 O5' A B2047 58.482 125.920 84.434 1.00 46.55 O
ATOM 6 C5' A B2047 59.439 124.985 83.890 1.00 45.73 C
ATOM 7 C4' A B2047 59.357 123.656 84.610 1.00 45.08 C
ATOM 8 O4' A B2047 58.117 122.967 84.249 1.00 43.16 O
ATOM 9 C3' A B2047 60.483 122.684 84.253 1.00 45.41 C
ATOM 10 O3' A B2047 60.870 121.913 85.393 1.00 48.56 O
ATOM 11 C2' A B2047 59.817 121.770 83.238 1.00 44.20 C
ATOM 12 O2' A B2047 60.443 120.513 83.081 1.00 41.97 O
ATOM 13 C1' A B2047 58.427 121.649 83.848 1.00 43.65 C
ATOM 14 N9 A B2047 57.443 121.162 82.884 1.00 45.37 N
ATOM 15 C8 A B2047 56.859 121.816 81.829 1.00 45.93 C
ATOM 16 N7 A B2047 56.099 121.046 81.086 1.00 45.57 N
ATOM 17 C5 A B2047 56.169 119.807 81.709 1.00 44.13 C
ATOM 18 C6 A B2047 55.612 118.562 81.398 1.00 43.23 C
ATOM 19 N6 A B2047 54.875 118.330 80.314 1.00 43.23 N
ATOM 20 N1 A B2047 55.858 117.539 82.237 1.00 43.68 N
ATOM 21 C2 A B2047 56.636 117.753 83.299 1.00 43.17 C
ATOM 22 N3 A B2047 57.240 118.866 83.684 1.00 43.83 N
ATOM 23 C4 A B2047 56.964 119.872 82.836 1.00 44.71 C
ATOM 24 P G B2048 62.422 121.550 85.614 1.00 50.05 P
ATOM 25 OP1 G B2048 63.138 122.844 85.744 1.00 52.95 O
ATOM 26 OP2 G B2048 62.858 120.577 84.572 1.00 48.57 O
ATOM 27 O5' G B2048 62.458 120.807 87.022 1.00 48.32 O
TER
Atoms:
C4: (56.615,125.062,80.677)
N3: (56.195,126.107,81.457)
OP1: (51.411,122.555,77.328)
OP2: (51.913,121.925,79.772)
C2: (54.908,126.394,81.829)
C1': (52.563,125.721,81.803)
C3': (50.687,126.250,80.443)
O5': (50.220,123.696,79.182)
O4': (51.796,124.563,81.540)
C5': (49.713,123.858,80.520)
P: (50.948,122.356,78.724)
C4': (50.448,124.975,81.233)
C2': (51.805,126.925,81.234)
O2': (51.306,127.686,82.312)
N1: (53.952,125.512,81.358)
O4: (57.820,124.872,80.525)
O2: (54.633,127.358,82.523)
C6: (54.307,124.469,80.540)
C5: (55.569,124.223,80.194)
O3': (49.522,127.058,80.458)
N3: (56.195,126.107,81.457)
OP1: (51.411,122.555,77.328)
OP2: (51.913,121.925,79.772)
C2: (54.908,126.394,81.829)
C1': (52.563,125.721,81.803)
C3': (50.687,126.250,80.443)
O5': (50.220,123.696,79.182)
O4': (51.796,124.563,81.540)
C5': (49.713,123.858,80.520)
P: (50.948,122.356,78.724)
C4': (50.448,124.975,81.233)
C2': (51.805,126.925,81.234)
O2': (51.306,127.686,82.312)
N1: (53.952,125.512,81.358)
O4: (57.820,124.872,80.525)
O2: (54.633,127.358,82.523)
C6: (54.307,124.469,80.540)
C5: (55.569,124.223,80.194)
O3': (49.522,127.058,80.458)
OP1: (58.593,127.591,82.574)
OP2: (57.446,128.152,84.794)
C3': (60.483,122.684,84.253)
C1': (58.427,121.649,83.848)
C5': (59.439,124.985,83.890)
O4': (58.117,122.967,84.249)
C8: (56.859,121.816,81.829)
O2': (60.443,120.513,83.081)
C6: (55.612,118.562,81.398)
C5: (56.169,119.807,81.709)
C4: (56.964,119.872,82.836)
P: (58.534,127.469,84.051)
C4': (59.357,123.656,84.610)
C2': (59.817,121.770,83.238)
C2: (56.636,117.753,83.299)
N1: (55.858,117.539,82.237)
N3: (57.240,118.866,83.684)
N6: (54.875,118.330,80.314)
N7: (56.099,121.046,81.086)
N9: (57.443,121.162,82.884)
O5': (58.482,125.920,84.434)
O3': (60.870,121.913,85.393)
OP2: (57.446,128.152,84.794)
C3': (60.483,122.684,84.253)
C1': (58.427,121.649,83.848)
C5': (59.439,124.985,83.890)
O4': (58.117,122.967,84.249)
C8: (56.859,121.816,81.829)
O2': (60.443,120.513,83.081)
C6: (55.612,118.562,81.398)
C5: (56.169,119.807,81.709)
C4: (56.964,119.872,82.836)
P: (58.534,127.469,84.051)
C4': (59.357,123.656,84.610)
C2': (59.817,121.770,83.238)
C2: (56.636,117.753,83.299)
N1: (55.858,117.539,82.237)
N3: (57.240,118.866,83.684)
N6: (54.875,118.330,80.314)
N7: (56.099,121.046,81.086)
N9: (57.443,121.162,82.884)
O5': (58.482,125.920,84.434)
O3': (60.870,121.913,85.393)
Image (generated by PyMOL):