ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1MMS:D32:D35

Extra

PDB:
ATOM 1 O3' U A 31 -12.349 -6.822 -63.321 1.00 44.91 O
ATOM 2 P U A 32 -11.820 -6.597 -64.817 1.00 43.63 P
ATOM 3 OP1 U A 32 -12.950 -6.055 -65.619 1.00 45.21 O
ATOM 4 OP2 U A 32 -11.131 -7.845 -65.255 1.00 40.26 O
ATOM 5 O5' U A 32 -10.714 -5.466 -64.618 1.00 33.40 O
ATOM 6 C5' U A 32 -9.461 -5.509 -65.306 1.00 21.92 C
ATOM 7 C4' U A 32 -8.508 -4.519 -64.689 1.00 33.84 C
ATOM 8 O4' U A 32 -7.824 -5.125 -63.563 1.00 30.68 O
ATOM 9 C3' U A 32 -7.392 -4.060 -65.607 1.00 39.61 C
ATOM 10 O3' U A 32 -7.851 -2.983 -66.405 1.00 47.78 O
ATOM 11 C2' U A 32 -6.301 -3.633 -64.635 1.00 38.07 C
ATOM 12 O2' U A 32 -6.517 -2.326 -64.141 1.00 48.19 O
ATOM 13 C1' U A 32 -6.486 -4.647 -63.504 1.00 32.72 C
ATOM 14 N1 U A 32 -5.568 -5.793 -63.608 1.00 23.49 N
ATOM 15 C2 U A 32 -4.251 -5.604 -63.225 1.00 27.40 C
ATOM 16 O2 U A 32 -3.823 -4.541 -62.823 1.00 42.53 O
ATOM 17 N3 U A 32 -3.447 -6.710 -63.335 1.00 31.74 N
ATOM 18 C4 U A 32 -3.809 -7.963 -63.784 1.00 30.45 C
ATOM 19 O4 U A 32 -2.962 -8.863 -63.823 1.00 30.78 O
ATOM 20 C5 U A 32 -5.183 -8.081 -64.168 1.00 19.97 C
ATOM 21 C6 U A 32 -5.995 -7.019 -64.069 1.00 27.83 C
ATOM 22 P A A 33 -7.438 -2.912 -67.949 1.00 45.35 P
ATOM 23 OP1 A A 33 -8.323 -1.906 -68.587 1.00 48.86 O
ATOM 24 OP2 A A 33 -7.390 -4.295 -68.485 1.00 47.07 O
ATOM 25 O5' A A 33 -5.952 -2.353 -67.903 1.00 30.12 O
TER

ATOM 1 O3' A B 34 0.816 -4.734 -62.538 1.00 33.50 O
ATOM 2 P A B 35 0.438 -6.094 -61.782 1.00 32.76 P
ATOM 3 OP1 A B 35 1.532 -7.068 -62.001 1.00 30.14 O
ATOM 4 OP2 A B 35 -0.961 -6.454 -62.137 1.00 17.94 O
ATOM 5 O5' A B 35 0.451 -5.671 -60.253 1.00 42.21 O
ATOM 6 C5' A B 35 1.644 -5.155 -59.645 1.00 32.88 C
ATOM 7 C4' A B 35 1.288 -4.326 -58.440 1.00 36.41 C
ATOM 8 O4' A B 35 0.612 -3.114 -58.860 1.00 29.39 O
ATOM 9 C3' A B 35 0.303 -4.967 -57.481 1.00 36.90 C
ATOM 10 O3' A B 35 0.922 -5.900 -56.613 1.00 33.24 O
ATOM 11 C2' A B 35 -0.287 -3.768 -56.748 1.00 42.63 C
ATOM 12 O2' A B 35 0.470 -3.347 -55.630 1.00 53.18 O
ATOM 13 C1' A B 35 -0.267 -2.692 -57.839 1.00 38.42 C
ATOM 14 N9 A B 35 -1.590 -2.432 -58.407 1.00 27.17 N
ATOM 15 C8 A B 35 -2.195 -1.210 -58.569 1.00 27.28 C
ATOM 16 N7 A B 35 -3.431 -1.285 -59.001 1.00 32.05 N
ATOM 17 C5 A B 35 -3.644 -2.647 -59.160 1.00 25.72 C
ATOM 18 C6 A B 35 -4.765 -3.385 -59.572 1.00 30.69 C
ATOM 19 N6 A B 35 -5.930 -2.832 -59.910 1.00 37.15 N
ATOM 20 N1 A B 35 -4.650 -4.731 -59.619 1.00 26.67 N
ATOM 21 C2 A B 35 -3.484 -5.284 -59.271 1.00 27.74 C
ATOM 22 N3 A B 35 -2.360 -4.697 -58.860 1.00 32.46 N
ATOM 23 C4 A B 35 -2.510 -3.363 -58.824 1.00 28.26 C
ATOM 24 P G B 36 0.286 -7.364 -56.455 1.00 31.77 P
ATOM 25 OP1 G B 36 0.266 -8.020 -57.788 1.00 46.35 O
ATOM 26 OP2 G B 36 -0.973 -7.249 -55.682 1.00 28.82 O
ATOM 27 O5' G B 36 1.337 -8.122 -55.545 1.00 32.87 O
TER

Atoms:
C4: (-3.809,-7.963,-63.784)
N3: (-3.447,-6.710,-63.335)
OP1: (-12.950,-6.055,-65.619)
OP2: (-11.131,-7.845,-65.255)
C2: (-4.251,-5.604,-63.225)
C1': (-6.486,-4.647,-63.504)
C3': (-7.392,-4.060,-65.607)
O5': (-10.714,-5.466,-64.618)
O4': (-7.824,-5.125,-63.563)
C5': (-9.461,-5.509,-65.306)
P: (-11.820,-6.597,-64.817)
C4': (-8.508,-4.519,-64.689)
C2': (-6.301,-3.633,-64.635)
O2': (-6.517,-2.326,-64.141)
N1: (-5.568,-5.793,-63.608)
O4: (-2.962,-8.863,-63.823)
O2: (-3.823,-4.541,-62.823)
C6: (-5.995,-7.019,-64.069)
C5: (-5.183,-8.081,-64.168)
O3': (-7.851,-2.983,-66.405)
OP1: (1.532,-7.068,-62.001)
OP2: (-0.961,-6.454,-62.137)
C3': (0.303,-4.967,-57.481)
C1': (-0.267,-2.692,-57.839)
C5': (1.644,-5.155,-59.645)
O4': (0.612,-3.114,-58.860)
C8: (-2.195,-1.210,-58.569)
O2': (0.470,-3.347,-55.630)
C6: (-4.765,-3.385,-59.572)
C5: (-3.644,-2.647,-59.160)
C4: (-2.510,-3.363,-58.824)
P: (0.438,-6.094,-61.782)
C4': (1.288,-4.326,-58.440)
C2': (-0.287,-3.768,-56.748)
C2: (-3.484,-5.284,-59.271)
N1: (-4.650,-4.731,-59.619)
N3: (-2.360,-4.697,-58.860)
N6: (-5.930,-2.832,-59.910)
N7: (-3.431,-1.285,-59.001)
N9: (-1.590,-2.432,-58.407)
O5': (0.451,-5.671,-60.253)
O3': (0.922,-5.900,-56.613)
Image (generated by PyMOL):
PyMOL image
show in jmol