Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OIJ:C4:C7
Extra
PDB:
ATOM 1 O3' C A 3 19.269 -22.393 22.157 1.00 62.78 O
ATOM 2 P U A 4 19.042 -21.047 22.984 1.00 85.69 P
ATOM 3 OP1 U A 4 20.064 -21.101 24.057 1.00 95.99 O
ATOM 4 OP2 U A 4 17.595 -20.900 23.294 1.00 78.61 O
ATOM 5 O5' U A 4 19.465 -19.956 21.924 1.00 69.46 O
ATOM 6 C5' U A 4 20.827 -19.892 21.526 1.00 61.61 C
ATOM 7 C4' U A 4 21.004 -19.013 20.319 1.00 53.69 C
ATOM 8 O4' U A 4 19.996 -19.373 19.335 1.00 59.26 O
ATOM 9 C3' U A 4 20.842 -17.515 20.579 1.00 60.79 C
ATOM 10 O3' U A 4 21.810 -16.796 19.822 1.00 58.37 O
ATOM 11 C2' U A 4 19.438 -17.207 20.064 1.00 65.39 C
ATOM 12 O2' U A 4 19.214 -15.878 19.627 1.00 59.02 O
ATOM 13 C1' U A 4 19.288 -18.218 18.930 1.00 61.44 C
ATOM 14 N1 U A 4 17.854 -18.493 18.785 1.00 60.46 N
ATOM 15 C2 U A 4 17.261 -18.064 17.620 1.00 60.34 C
ATOM 16 O2 U A 4 17.897 -17.516 16.735 1.00 61.54 O
ATOM 17 N3 U A 4 15.914 -18.304 17.532 1.00 53.16 N
ATOM 18 C4 U A 4 15.136 -18.911 18.492 1.00 64.59 C
ATOM 19 O4 U A 4 13.931 -19.066 18.279 1.00 78.14 O
ATOM 20 C5 U A 4 15.834 -19.321 19.675 1.00 65.86 C
ATOM 21 C6 U A 4 17.142 -19.096 19.787 1.00 60.97 C
ATOM 22 P U A 5 23.076 -16.195 20.591 1.00 55.33 P
ATOM 23 OP1 U A 5 24.120 -15.859 19.589 1.00 45.01 O
ATOM 24 OP2 U A 5 23.403 -17.081 21.755 1.00 57.73 O
ATOM 25 O5' U A 5 22.385 -14.861 21.056 1.00 69.65 O
TER
ATOM 1 O3' C B 6 15.666 -13.497 16.080 1.00 57.39 O
ATOM 2 P A B 7 14.861 -14.698 16.772 1.00 61.69 P
ATOM 3 OP1 A B 7 15.296 -14.763 18.196 1.00 74.92 O
ATOM 4 OP2 A B 7 15.008 -15.896 15.907 1.00 62.02 O
ATOM 5 O5' A B 7 13.379 -14.181 16.592 1.00 60.99 O
ATOM 6 C5' A B 7 12.776 -14.377 15.314 1.00 61.02 C
ATOM 7 C4' A B 7 11.366 -14.907 15.416 1.00 53.96 C
ATOM 8 O4' A B 7 10.622 -14.065 16.335 1.00 58.95 O
ATOM 9 C3' A B 7 10.593 -14.892 14.108 1.00 49.64 C
ATOM 10 O3' A B 7 9.697 -15.988 14.073 1.00 44.15 O
ATOM 11 C2' A B 7 9.798 -13.592 14.179 1.00 54.02 C
ATOM 12 O2' A B 7 8.600 -13.647 13.433 1.00 54.40 O
ATOM 13 C1' A B 7 9.527 -13.465 15.677 1.00 58.04 C
ATOM 14 N9 A B 7 9.450 -12.092 16.179 1.00 46.27 N
ATOM 15 C8 A B 7 8.407 -11.507 16.841 1.00 59.07 C
ATOM 16 N7 A B 7 8.605 -10.255 17.193 1.00 49.89 N
ATOM 17 C5 A B 7 9.870 -9.992 16.733 1.00 58.58 C
ATOM 18 C6 A B 7 10.652 -8.829 16.798 1.00 53.97 C
ATOM 19 N6 A B 7 10.236 -7.701 17.371 1.00 60.55 N
ATOM 20 N1 A B 7 11.887 -8.876 16.247 1.00 55.54 N
ATOM 21 C2 A B 7 12.276 -10.031 15.672 1.00 64.55 C
ATOM 22 N3 A B 7 11.627 -11.201 15.542 1.00 64.82 N
ATOM 23 C4 A B 7 10.409 -11.116 16.106 1.00 64.24 C
ATOM 24 P A B 8 10.210 -17.283 13.303 1.00 72.11 P
ATOM 25 OP1 A B 8 9.217 -18.370 13.529 1.00 45.44 O
ATOM 26 OP2 A B 8 11.595 -17.410 13.813 1.00 63.01 O
ATOM 27 O5' A B 8 10.287 -16.882 11.757 1.00 56.90 O
TER
ATOM 2 P U A 4 19.042 -21.047 22.984 1.00 85.69 P
ATOM 3 OP1 U A 4 20.064 -21.101 24.057 1.00 95.99 O
ATOM 4 OP2 U A 4 17.595 -20.900 23.294 1.00 78.61 O
ATOM 5 O5' U A 4 19.465 -19.956 21.924 1.00 69.46 O
ATOM 6 C5' U A 4 20.827 -19.892 21.526 1.00 61.61 C
ATOM 7 C4' U A 4 21.004 -19.013 20.319 1.00 53.69 C
ATOM 8 O4' U A 4 19.996 -19.373 19.335 1.00 59.26 O
ATOM 9 C3' U A 4 20.842 -17.515 20.579 1.00 60.79 C
ATOM 10 O3' U A 4 21.810 -16.796 19.822 1.00 58.37 O
ATOM 11 C2' U A 4 19.438 -17.207 20.064 1.00 65.39 C
ATOM 12 O2' U A 4 19.214 -15.878 19.627 1.00 59.02 O
ATOM 13 C1' U A 4 19.288 -18.218 18.930 1.00 61.44 C
ATOM 14 N1 U A 4 17.854 -18.493 18.785 1.00 60.46 N
ATOM 15 C2 U A 4 17.261 -18.064 17.620 1.00 60.34 C
ATOM 16 O2 U A 4 17.897 -17.516 16.735 1.00 61.54 O
ATOM 17 N3 U A 4 15.914 -18.304 17.532 1.00 53.16 N
ATOM 18 C4 U A 4 15.136 -18.911 18.492 1.00 64.59 C
ATOM 19 O4 U A 4 13.931 -19.066 18.279 1.00 78.14 O
ATOM 20 C5 U A 4 15.834 -19.321 19.675 1.00 65.86 C
ATOM 21 C6 U A 4 17.142 -19.096 19.787 1.00 60.97 C
ATOM 22 P U A 5 23.076 -16.195 20.591 1.00 55.33 P
ATOM 23 OP1 U A 5 24.120 -15.859 19.589 1.00 45.01 O
ATOM 24 OP2 U A 5 23.403 -17.081 21.755 1.00 57.73 O
ATOM 25 O5' U A 5 22.385 -14.861 21.056 1.00 69.65 O
TER
ATOM 1 O3' C B 6 15.666 -13.497 16.080 1.00 57.39 O
ATOM 2 P A B 7 14.861 -14.698 16.772 1.00 61.69 P
ATOM 3 OP1 A B 7 15.296 -14.763 18.196 1.00 74.92 O
ATOM 4 OP2 A B 7 15.008 -15.896 15.907 1.00 62.02 O
ATOM 5 O5' A B 7 13.379 -14.181 16.592 1.00 60.99 O
ATOM 6 C5' A B 7 12.776 -14.377 15.314 1.00 61.02 C
ATOM 7 C4' A B 7 11.366 -14.907 15.416 1.00 53.96 C
ATOM 8 O4' A B 7 10.622 -14.065 16.335 1.00 58.95 O
ATOM 9 C3' A B 7 10.593 -14.892 14.108 1.00 49.64 C
ATOM 10 O3' A B 7 9.697 -15.988 14.073 1.00 44.15 O
ATOM 11 C2' A B 7 9.798 -13.592 14.179 1.00 54.02 C
ATOM 12 O2' A B 7 8.600 -13.647 13.433 1.00 54.40 O
ATOM 13 C1' A B 7 9.527 -13.465 15.677 1.00 58.04 C
ATOM 14 N9 A B 7 9.450 -12.092 16.179 1.00 46.27 N
ATOM 15 C8 A B 7 8.407 -11.507 16.841 1.00 59.07 C
ATOM 16 N7 A B 7 8.605 -10.255 17.193 1.00 49.89 N
ATOM 17 C5 A B 7 9.870 -9.992 16.733 1.00 58.58 C
ATOM 18 C6 A B 7 10.652 -8.829 16.798 1.00 53.97 C
ATOM 19 N6 A B 7 10.236 -7.701 17.371 1.00 60.55 N
ATOM 20 N1 A B 7 11.887 -8.876 16.247 1.00 55.54 N
ATOM 21 C2 A B 7 12.276 -10.031 15.672 1.00 64.55 C
ATOM 22 N3 A B 7 11.627 -11.201 15.542 1.00 64.82 N
ATOM 23 C4 A B 7 10.409 -11.116 16.106 1.00 64.24 C
ATOM 24 P A B 8 10.210 -17.283 13.303 1.00 72.11 P
ATOM 25 OP1 A B 8 9.217 -18.370 13.529 1.00 45.44 O
ATOM 26 OP2 A B 8 11.595 -17.410 13.813 1.00 63.01 O
ATOM 27 O5' A B 8 10.287 -16.882 11.757 1.00 56.90 O
TER
Atoms:
C4: (15.136,-18.911,18.492)
N3: (15.914,-18.304,17.532)
OP1: (20.064,-21.101,24.057)
OP2: (17.595,-20.900,23.294)
C2: (17.261,-18.064,17.620)
C1': (19.288,-18.218,18.930)
C3': (20.842,-17.515,20.579)
O5': (19.465,-19.956,21.924)
O4': (19.996,-19.373,19.335)
C5': (20.827,-19.892,21.526)
P: (19.042,-21.047,22.984)
C4': (21.004,-19.013,20.319)
C2': (19.438,-17.207,20.064)
O2': (19.214,-15.878,19.627)
N1: (17.854,-18.493,18.785)
O4: (13.931,-19.066,18.279)
O2: (17.897,-17.516,16.735)
C6: (17.142,-19.096,19.787)
C5: (15.834,-19.321,19.675)
O3': (21.810,-16.796,19.822)
N3: (15.914,-18.304,17.532)
OP1: (20.064,-21.101,24.057)
OP2: (17.595,-20.900,23.294)
C2: (17.261,-18.064,17.620)
C1': (19.288,-18.218,18.930)
C3': (20.842,-17.515,20.579)
O5': (19.465,-19.956,21.924)
O4': (19.996,-19.373,19.335)
C5': (20.827,-19.892,21.526)
P: (19.042,-21.047,22.984)
C4': (21.004,-19.013,20.319)
C2': (19.438,-17.207,20.064)
O2': (19.214,-15.878,19.627)
N1: (17.854,-18.493,18.785)
O4: (13.931,-19.066,18.279)
O2: (17.897,-17.516,16.735)
C6: (17.142,-19.096,19.787)
C5: (15.834,-19.321,19.675)
O3': (21.810,-16.796,19.822)
OP1: (15.296,-14.763,18.196)
OP2: (15.008,-15.896,15.907)
C3': (10.593,-14.892,14.108)
C1': (9.527,-13.465,15.677)
C5': (12.776,-14.377,15.314)
O4': (10.622,-14.065,16.335)
C8: (8.407,-11.507,16.841)
O2': (8.600,-13.647,13.433)
C6: (10.652,-8.829,16.798)
C5: (9.870,-9.992,16.733)
C4: (10.409,-11.116,16.106)
P: (14.861,-14.698,16.772)
C4': (11.366,-14.907,15.416)
C2': (9.798,-13.592,14.179)
C2: (12.276,-10.031,15.672)
N1: (11.887,-8.876,16.247)
N3: (11.627,-11.201,15.542)
N6: (10.236,-7.701,17.371)
N7: (8.605,-10.255,17.193)
N9: (9.450,-12.092,16.179)
O5': (13.379,-14.181,16.592)
O3': (9.697,-15.988,14.073)
OP2: (15.008,-15.896,15.907)
C3': (10.593,-14.892,14.108)
C1': (9.527,-13.465,15.677)
C5': (12.776,-14.377,15.314)
O4': (10.622,-14.065,16.335)
C8: (8.407,-11.507,16.841)
O2': (8.600,-13.647,13.433)
C6: (10.652,-8.829,16.798)
C5: (9.870,-9.992,16.733)
C4: (10.409,-11.116,16.106)
P: (14.861,-14.698,16.772)
C4': (11.366,-14.907,15.416)
C2': (9.798,-13.592,14.179)
C2: (12.276,-10.031,15.672)
N1: (11.887,-8.876,16.247)
N3: (11.627,-11.201,15.542)
N6: (10.236,-7.701,17.371)
N7: (8.605,-10.255,17.193)
N9: (9.450,-12.092,16.179)
O5': (13.379,-14.181,16.592)
O3': (9.697,-15.988,14.073)
Image (generated by PyMOL):