Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Y27:X49:X21
Extra
PDB:
ATOM 1 O3' G A 48 14.429 2.166 56.379 1.00 51.39 O
ATOM 2 P U A 49 13.577 0.832 56.660 1.00 51.03 P
ATOM 3 OP1 U A 49 12.776 1.081 57.879 1.00 51.04 O
ATOM 4 OP2 U A 49 14.500 -0.323 56.640 1.00 51.28 O
ATOM 5 O5' U A 49 12.580 0.731 55.406 1.00 51.12 O
ATOM 6 C5' U A 49 11.184 0.442 55.539 1.00 50.88 C
ATOM 7 C4' U A 49 10.883 -1.046 55.437 1.00 50.54 C
ATOM 8 O4' U A 49 11.782 -1.689 54.502 1.00 50.23 O
ATOM 9 C3' U A 49 11.035 -1.794 56.762 1.00 50.63 C
ATOM 10 O3' U A 49 9.774 -2.046 57.447 1.00 51.03 O
ATOM 11 C2' U A 49 11.837 -3.061 56.426 1.00 50.33 C
ATOM 12 O2' U A 49 11.218 -4.265 56.837 1.00 50.21 O
ATOM 13 C1' U A 49 11.980 -3.029 54.904 1.00 50.16 C
ATOM 14 N1 U A 49 13.333 -3.519 54.468 1.00 50.06 N
ATOM 15 C2 U A 49 13.518 -4.868 54.202 1.00 49.96 C
ATOM 16 O2 U A 49 12.635 -5.707 54.282 1.00 49.89 O
ATOM 17 N3 U A 49 14.795 -5.214 53.823 1.00 50.00 N
ATOM 18 C4 U A 49 15.888 -4.371 53.691 1.00 50.03 C
ATOM 19 O4 U A 49 16.971 -4.831 53.343 1.00 49.92 O
ATOM 20 C5 U A 49 15.625 -2.984 53.991 1.00 50.08 C
ATOM 21 C6 U A 49 14.387 -2.622 54.361 1.00 50.13 C
ATOM 22 P A A 50 8.385 -2.490 56.769 1.00 51.13 P
ATOM 23 OP1 A A 50 7.454 -2.798 57.877 1.00 51.09 O
ATOM 24 OP2 A A 50 8.649 -3.521 55.738 1.00 50.90 O
ATOM 25 O5' A A 50 7.864 -1.147 56.073 1.00 50.96 O
TER
ATOM 1 O3' U B 20 14.373 -8.607 51.321 1.00 45.46 O
ATOM 2 P A B 21 15.631 -8.890 52.266 1.00 45.45 P
ATOM 3 OP1 A B 21 15.746 -10.352 52.462 1.00 45.81 O
ATOM 4 OP2 A B 21 15.559 -7.994 53.440 1.00 45.34 O
ATOM 5 O5' A B 21 16.838 -8.417 51.335 1.00 45.56 O
ATOM 6 C5' A B 21 17.072 -9.029 50.067 1.00 45.14 C
ATOM 7 C4' A B 21 18.122 -8.244 49.304 1.00 45.07 C
ATOM 8 O4' A B 21 17.564 -6.958 48.952 1.00 44.59 O
ATOM 9 C3' A B 21 19.416 -7.958 50.067 1.00 45.35 C
ATOM 10 O3' A B 21 20.554 -8.225 49.234 1.00 46.24 O
ATOM 11 C2' A B 21 19.296 -6.484 50.462 1.00 44.99 C
ATOM 12 O2' A B 21 20.549 -5.830 50.532 1.00 44.79 O
ATOM 13 C1' A B 21 18.435 -5.917 49.332 1.00 44.46 C
ATOM 14 N9 A B 21 17.607 -4.777 49.722 1.00 44.24 N
ATOM 15 C8 A B 21 16.291 -4.812 50.099 1.00 44.17 C
ATOM 16 N7 A B 21 15.790 -3.638 50.399 1.00 44.16 N
ATOM 17 C5 A B 21 16.850 -2.769 50.207 1.00 44.18 C
ATOM 18 C6 A B 21 16.974 -1.369 50.357 1.00 44.18 C
ATOM 19 N6 A B 21 15.967 -0.583 50.752 1.00 44.16 N
ATOM 20 N1 A B 21 18.174 -0.805 50.084 1.00 44.23 N
ATOM 21 C2 A B 21 19.184 -1.594 49.682 1.00 44.22 C
ATOM 22 N3 A B 21 19.187 -2.919 49.509 1.00 44.21 N
ATOM 23 C4 A B 21 17.981 -3.453 49.788 1.00 44.20 C
ATOM 24 P U B 22 21.255 -9.669 49.237 1.00 46.66 P
ATOM 25 OP1 U B 22 21.214 -10.188 50.624 1.00 46.30 O
ATOM 26 OP2 U B 22 22.562 -9.548 48.549 1.00 46.53 O
ATOM 27 O5' U B 22 20.236 -10.532 48.336 1.00 46.88 O
TER
ATOM 2 P U A 49 13.577 0.832 56.660 1.00 51.03 P
ATOM 3 OP1 U A 49 12.776 1.081 57.879 1.00 51.04 O
ATOM 4 OP2 U A 49 14.500 -0.323 56.640 1.00 51.28 O
ATOM 5 O5' U A 49 12.580 0.731 55.406 1.00 51.12 O
ATOM 6 C5' U A 49 11.184 0.442 55.539 1.00 50.88 C
ATOM 7 C4' U A 49 10.883 -1.046 55.437 1.00 50.54 C
ATOM 8 O4' U A 49 11.782 -1.689 54.502 1.00 50.23 O
ATOM 9 C3' U A 49 11.035 -1.794 56.762 1.00 50.63 C
ATOM 10 O3' U A 49 9.774 -2.046 57.447 1.00 51.03 O
ATOM 11 C2' U A 49 11.837 -3.061 56.426 1.00 50.33 C
ATOM 12 O2' U A 49 11.218 -4.265 56.837 1.00 50.21 O
ATOM 13 C1' U A 49 11.980 -3.029 54.904 1.00 50.16 C
ATOM 14 N1 U A 49 13.333 -3.519 54.468 1.00 50.06 N
ATOM 15 C2 U A 49 13.518 -4.868 54.202 1.00 49.96 C
ATOM 16 O2 U A 49 12.635 -5.707 54.282 1.00 49.89 O
ATOM 17 N3 U A 49 14.795 -5.214 53.823 1.00 50.00 N
ATOM 18 C4 U A 49 15.888 -4.371 53.691 1.00 50.03 C
ATOM 19 O4 U A 49 16.971 -4.831 53.343 1.00 49.92 O
ATOM 20 C5 U A 49 15.625 -2.984 53.991 1.00 50.08 C
ATOM 21 C6 U A 49 14.387 -2.622 54.361 1.00 50.13 C
ATOM 22 P A A 50 8.385 -2.490 56.769 1.00 51.13 P
ATOM 23 OP1 A A 50 7.454 -2.798 57.877 1.00 51.09 O
ATOM 24 OP2 A A 50 8.649 -3.521 55.738 1.00 50.90 O
ATOM 25 O5' A A 50 7.864 -1.147 56.073 1.00 50.96 O
TER
ATOM 1 O3' U B 20 14.373 -8.607 51.321 1.00 45.46 O
ATOM 2 P A B 21 15.631 -8.890 52.266 1.00 45.45 P
ATOM 3 OP1 A B 21 15.746 -10.352 52.462 1.00 45.81 O
ATOM 4 OP2 A B 21 15.559 -7.994 53.440 1.00 45.34 O
ATOM 5 O5' A B 21 16.838 -8.417 51.335 1.00 45.56 O
ATOM 6 C5' A B 21 17.072 -9.029 50.067 1.00 45.14 C
ATOM 7 C4' A B 21 18.122 -8.244 49.304 1.00 45.07 C
ATOM 8 O4' A B 21 17.564 -6.958 48.952 1.00 44.59 O
ATOM 9 C3' A B 21 19.416 -7.958 50.067 1.00 45.35 C
ATOM 10 O3' A B 21 20.554 -8.225 49.234 1.00 46.24 O
ATOM 11 C2' A B 21 19.296 -6.484 50.462 1.00 44.99 C
ATOM 12 O2' A B 21 20.549 -5.830 50.532 1.00 44.79 O
ATOM 13 C1' A B 21 18.435 -5.917 49.332 1.00 44.46 C
ATOM 14 N9 A B 21 17.607 -4.777 49.722 1.00 44.24 N
ATOM 15 C8 A B 21 16.291 -4.812 50.099 1.00 44.17 C
ATOM 16 N7 A B 21 15.790 -3.638 50.399 1.00 44.16 N
ATOM 17 C5 A B 21 16.850 -2.769 50.207 1.00 44.18 C
ATOM 18 C6 A B 21 16.974 -1.369 50.357 1.00 44.18 C
ATOM 19 N6 A B 21 15.967 -0.583 50.752 1.00 44.16 N
ATOM 20 N1 A B 21 18.174 -0.805 50.084 1.00 44.23 N
ATOM 21 C2 A B 21 19.184 -1.594 49.682 1.00 44.22 C
ATOM 22 N3 A B 21 19.187 -2.919 49.509 1.00 44.21 N
ATOM 23 C4 A B 21 17.981 -3.453 49.788 1.00 44.20 C
ATOM 24 P U B 22 21.255 -9.669 49.237 1.00 46.66 P
ATOM 25 OP1 U B 22 21.214 -10.188 50.624 1.00 46.30 O
ATOM 26 OP2 U B 22 22.562 -9.548 48.549 1.00 46.53 O
ATOM 27 O5' U B 22 20.236 -10.532 48.336 1.00 46.88 O
TER
Atoms:
C4: (15.888,-4.371,53.691)
N3: (14.795,-5.214,53.823)
OP1: (12.776,1.081,57.879)
OP2: (14.500,-0.323,56.640)
C2: (13.518,-4.868,54.202)
C1': (11.980,-3.029,54.904)
C3': (11.035,-1.794,56.762)
O5': (12.580,0.731,55.406)
O4': (11.782,-1.689,54.502)
C5': (11.184,0.442,55.539)
P: (13.577,0.832,56.660)
C4': (10.883,-1.046,55.437)
C2': (11.837,-3.061,56.426)
O2': (11.218,-4.265,56.837)
N1: (13.333,-3.519,54.468)
O4: (16.971,-4.831,53.343)
O2: (12.635,-5.707,54.282)
C6: (14.387,-2.622,54.361)
C5: (15.625,-2.984,53.991)
O3': (9.774,-2.046,57.447)
N3: (14.795,-5.214,53.823)
OP1: (12.776,1.081,57.879)
OP2: (14.500,-0.323,56.640)
C2: (13.518,-4.868,54.202)
C1': (11.980,-3.029,54.904)
C3': (11.035,-1.794,56.762)
O5': (12.580,0.731,55.406)
O4': (11.782,-1.689,54.502)
C5': (11.184,0.442,55.539)
P: (13.577,0.832,56.660)
C4': (10.883,-1.046,55.437)
C2': (11.837,-3.061,56.426)
O2': (11.218,-4.265,56.837)
N1: (13.333,-3.519,54.468)
O4: (16.971,-4.831,53.343)
O2: (12.635,-5.707,54.282)
C6: (14.387,-2.622,54.361)
C5: (15.625,-2.984,53.991)
O3': (9.774,-2.046,57.447)
OP1: (15.746,-10.352,52.462)
OP2: (15.559,-7.994,53.440)
C3': (19.416,-7.958,50.067)
C1': (18.435,-5.917,49.332)
C5': (17.072,-9.029,50.067)
O4': (17.564,-6.958,48.952)
C8: (16.291,-4.812,50.099)
O2': (20.549,-5.830,50.532)
C6: (16.974,-1.369,50.357)
C5: (16.850,-2.769,50.207)
C4: (17.981,-3.453,49.788)
P: (15.631,-8.890,52.266)
C4': (18.122,-8.244,49.304)
C2': (19.296,-6.484,50.462)
C2: (19.184,-1.594,49.682)
N1: (18.174,-0.805,50.084)
N3: (19.187,-2.919,49.509)
N6: (15.967,-0.583,50.752)
N7: (15.790,-3.638,50.399)
N9: (17.607,-4.777,49.722)
O5': (16.838,-8.417,51.335)
O3': (20.554,-8.225,49.234)
OP2: (15.559,-7.994,53.440)
C3': (19.416,-7.958,50.067)
C1': (18.435,-5.917,49.332)
C5': (17.072,-9.029,50.067)
O4': (17.564,-6.958,48.952)
C8: (16.291,-4.812,50.099)
O2': (20.549,-5.830,50.532)
C6: (16.974,-1.369,50.357)
C5: (16.850,-2.769,50.207)
C4: (17.981,-3.453,49.788)
P: (15.631,-8.890,52.266)
C4': (18.122,-8.244,49.304)
C2': (19.296,-6.484,50.462)
C2: (19.184,-1.594,49.682)
N1: (18.174,-0.805,50.084)
N3: (19.187,-2.919,49.509)
N6: (15.967,-0.583,50.752)
N7: (15.790,-3.638,50.399)
N9: (17.607,-4.777,49.722)
O5': (16.838,-8.417,51.335)
O3': (20.554,-8.225,49.234)
Image (generated by PyMOL):