Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21329:21498
Extra
PDB:
ATOM 1 O3' A A1328 -109.362 -73.316 43.384 1.00121.98 O
ATOM 2 P U A1329 -108.651 -71.896 43.091 1.00101.33 P
ATOM 3 OP1 U A1329 -109.587 -70.818 43.514 1.00101.71 O
ATOM 4 OP2 U A1329 -108.199 -71.936 41.674 1.00101.03 O
ATOM 5 O5' U A1329 -107.385 -71.923 44.072 1.00100.54 O
ATOM 6 C5' U A1329 -106.294 -72.816 43.838 1.00100.06 C
ATOM 7 C4' U A1329 -104.989 -72.314 44.438 1.00 99.14 C
ATOM 8 O4' U A1329 -104.510 -71.167 43.687 1.00 98.54 O
ATOM 9 C3' U A1329 -105.058 -71.870 45.897 1.00 99.13 C
ATOM 10 O3' U A1329 -103.878 -72.285 46.575 1.00 98.55 O
ATOM 11 C2' U A1329 -105.080 -70.350 45.800 1.00 98.76 C
ATOM 12 O2' U A1329 -104.581 -69.693 46.937 1.00 98.33 O
ATOM 13 C1' U A1329 -104.200 -70.117 44.583 1.00 98.11 C
ATOM 14 N1 U A1329 -104.430 -68.824 43.896 1.00 97.93 N
ATOM 15 C2 U A1329 -103.447 -67.858 43.961 1.00 97.11 C
ATOM 16 O2 U A1329 -102.414 -68.036 44.571 1.00 96.54 O
ATOM 17 N3 U A1329 -103.707 -66.686 43.292 1.00 97.01 N
ATOM 18 C4 U A1329 -104.845 -66.376 42.582 1.00 97.65 C
ATOM 19 O4 U A1329 -104.985 -65.286 42.026 1.00 97.52 O
ATOM 20 C5 U A1329 -105.799 -67.428 42.555 1.00 98.47 C
ATOM 21 C6 U A1329 -105.569 -68.578 43.194 1.00 98.58 C
ATOM 22 P A A1330 -103.883 -73.659 47.402 1.00 99.64 P
ATOM 23 OP1 A A1330 -102.525 -74.244 47.294 1.00 98.99 O
ATOM 24 OP2 A A1330 -105.044 -74.452 46.918 1.00100.53 O
ATOM 25 O5' A A1330 -104.156 -73.174 48.894 1.00 99.78 O
TER
ATOM 1 O3' A B1497 -99.833 -66.201 42.581 1.00 92.70 O
ATOM 2 P A B1498 -100.092 -65.060 43.675 1.00 82.75 P
ATOM 3 OP1 A B1498 -101.548 -64.883 43.807 1.00 83.57 O
ATOM 4 OP2 A B1498 -99.283 -63.891 43.268 1.00 82.04 O
ATOM 5 O5' A B1498 -99.500 -65.733 45.003 1.00 82.56 O
ATOM 6 C5' A B1498 -100.358 -66.257 46.021 1.00 83.20 C
ATOM 7 C4' A B1498 -99.654 -67.275 46.899 1.00 83.06 C
ATOM 8 O4' A B1498 -100.197 -67.201 48.256 1.00 83.41 O
ATOM 9 C3' A B1498 -99.828 -68.729 46.476 1.00 83.50 C
ATOM 10 O3' A B1498 -98.721 -69.486 46.949 1.00 83.09 O
ATOM 11 C2' A B1498 -101.067 -69.115 47.272 1.00 84.35 C
ATOM 12 O2' A B1498 -101.317 -70.503 47.407 1.00 84.86 O
ATOM 13 C1' A B1498 -100.751 -68.458 48.600 1.00 84.07 C
ATOM 14 N9 A B1498 -101.943 -68.256 49.421 1.00 84.77 N
ATOM 15 C8 A B1498 -103.167 -67.878 48.923 1.00 85.38 C
ATOM 16 N7 A B1498 -104.105 -67.818 49.829 1.00 85.99 N
ATOM 17 C5 A B1498 -103.461 -68.229 50.991 1.00 85.79 C
ATOM 18 C6 A B1498 -103.936 -68.376 52.308 1.00 86.23 C
ATOM 19 N6 A B1498 -105.220 -68.125 52.617 1.00 86.99 N
ATOM 20 N1 A B1498 -103.052 -68.789 53.262 1.00 85.89 N
ATOM 21 C2 A B1498 -101.783 -69.030 52.888 1.00 85.16 C
ATOM 22 N3 A B1498 -101.229 -68.927 51.674 1.00 84.70 N
ATOM 23 C4 A B1498 -102.129 -68.517 50.759 1.00 85.04 C
ATOM 24 P U B1499 -97.981 -70.547 45.991 1.00 91.75 P
ATOM 25 OP1 U B1499 -97.469 -71.630 46.865 1.00 91.81 O
ATOM 26 OP2 U B1499 -97.030 -69.789 45.152 1.00 91.01 O
ATOM 27 O5' U B1499 -99.146 -71.118 45.080 1.00 92.51 O
TER
ATOM 2 P U A1329 -108.651 -71.896 43.091 1.00101.33 P
ATOM 3 OP1 U A1329 -109.587 -70.818 43.514 1.00101.71 O
ATOM 4 OP2 U A1329 -108.199 -71.936 41.674 1.00101.03 O
ATOM 5 O5' U A1329 -107.385 -71.923 44.072 1.00100.54 O
ATOM 6 C5' U A1329 -106.294 -72.816 43.838 1.00100.06 C
ATOM 7 C4' U A1329 -104.989 -72.314 44.438 1.00 99.14 C
ATOM 8 O4' U A1329 -104.510 -71.167 43.687 1.00 98.54 O
ATOM 9 C3' U A1329 -105.058 -71.870 45.897 1.00 99.13 C
ATOM 10 O3' U A1329 -103.878 -72.285 46.575 1.00 98.55 O
ATOM 11 C2' U A1329 -105.080 -70.350 45.800 1.00 98.76 C
ATOM 12 O2' U A1329 -104.581 -69.693 46.937 1.00 98.33 O
ATOM 13 C1' U A1329 -104.200 -70.117 44.583 1.00 98.11 C
ATOM 14 N1 U A1329 -104.430 -68.824 43.896 1.00 97.93 N
ATOM 15 C2 U A1329 -103.447 -67.858 43.961 1.00 97.11 C
ATOM 16 O2 U A1329 -102.414 -68.036 44.571 1.00 96.54 O
ATOM 17 N3 U A1329 -103.707 -66.686 43.292 1.00 97.01 N
ATOM 18 C4 U A1329 -104.845 -66.376 42.582 1.00 97.65 C
ATOM 19 O4 U A1329 -104.985 -65.286 42.026 1.00 97.52 O
ATOM 20 C5 U A1329 -105.799 -67.428 42.555 1.00 98.47 C
ATOM 21 C6 U A1329 -105.569 -68.578 43.194 1.00 98.58 C
ATOM 22 P A A1330 -103.883 -73.659 47.402 1.00 99.64 P
ATOM 23 OP1 A A1330 -102.525 -74.244 47.294 1.00 98.99 O
ATOM 24 OP2 A A1330 -105.044 -74.452 46.918 1.00100.53 O
ATOM 25 O5' A A1330 -104.156 -73.174 48.894 1.00 99.78 O
TER
ATOM 1 O3' A B1497 -99.833 -66.201 42.581 1.00 92.70 O
ATOM 2 P A B1498 -100.092 -65.060 43.675 1.00 82.75 P
ATOM 3 OP1 A B1498 -101.548 -64.883 43.807 1.00 83.57 O
ATOM 4 OP2 A B1498 -99.283 -63.891 43.268 1.00 82.04 O
ATOM 5 O5' A B1498 -99.500 -65.733 45.003 1.00 82.56 O
ATOM 6 C5' A B1498 -100.358 -66.257 46.021 1.00 83.20 C
ATOM 7 C4' A B1498 -99.654 -67.275 46.899 1.00 83.06 C
ATOM 8 O4' A B1498 -100.197 -67.201 48.256 1.00 83.41 O
ATOM 9 C3' A B1498 -99.828 -68.729 46.476 1.00 83.50 C
ATOM 10 O3' A B1498 -98.721 -69.486 46.949 1.00 83.09 O
ATOM 11 C2' A B1498 -101.067 -69.115 47.272 1.00 84.35 C
ATOM 12 O2' A B1498 -101.317 -70.503 47.407 1.00 84.86 O
ATOM 13 C1' A B1498 -100.751 -68.458 48.600 1.00 84.07 C
ATOM 14 N9 A B1498 -101.943 -68.256 49.421 1.00 84.77 N
ATOM 15 C8 A B1498 -103.167 -67.878 48.923 1.00 85.38 C
ATOM 16 N7 A B1498 -104.105 -67.818 49.829 1.00 85.99 N
ATOM 17 C5 A B1498 -103.461 -68.229 50.991 1.00 85.79 C
ATOM 18 C6 A B1498 -103.936 -68.376 52.308 1.00 86.23 C
ATOM 19 N6 A B1498 -105.220 -68.125 52.617 1.00 86.99 N
ATOM 20 N1 A B1498 -103.052 -68.789 53.262 1.00 85.89 N
ATOM 21 C2 A B1498 -101.783 -69.030 52.888 1.00 85.16 C
ATOM 22 N3 A B1498 -101.229 -68.927 51.674 1.00 84.70 N
ATOM 23 C4 A B1498 -102.129 -68.517 50.759 1.00 85.04 C
ATOM 24 P U B1499 -97.981 -70.547 45.991 1.00 91.75 P
ATOM 25 OP1 U B1499 -97.469 -71.630 46.865 1.00 91.81 O
ATOM 26 OP2 U B1499 -97.030 -69.789 45.152 1.00 91.01 O
ATOM 27 O5' U B1499 -99.146 -71.118 45.080 1.00 92.51 O
TER
Atoms:
C4: (-104.845,-66.376,42.582)
N3: (-103.707,-66.686,43.292)
OP1: (-109.587,-70.818,43.514)
OP2: (-108.199,-71.936,41.674)
C2: (-103.447,-67.858,43.961)
C1': (-104.200,-70.117,44.583)
C3': (-105.058,-71.870,45.897)
O5': (-107.385,-71.923,44.072)
O4': (-104.510,-71.167,43.687)
C5': (-106.294,-72.816,43.838)
P: (-108.651,-71.896,43.091)
C4': (-104.989,-72.314,44.438)
C2': (-105.080,-70.350,45.800)
O2': (-104.581,-69.693,46.937)
N1: (-104.430,-68.824,43.896)
O4: (-104.985,-65.286,42.026)
O2: (-102.414,-68.036,44.571)
C6: (-105.569,-68.578,43.194)
C5: (-105.799,-67.428,42.555)
O3': (-103.878,-72.285,46.575)
N3: (-103.707,-66.686,43.292)
OP1: (-109.587,-70.818,43.514)
OP2: (-108.199,-71.936,41.674)
C2: (-103.447,-67.858,43.961)
C1': (-104.200,-70.117,44.583)
C3': (-105.058,-71.870,45.897)
O5': (-107.385,-71.923,44.072)
O4': (-104.510,-71.167,43.687)
C5': (-106.294,-72.816,43.838)
P: (-108.651,-71.896,43.091)
C4': (-104.989,-72.314,44.438)
C2': (-105.080,-70.350,45.800)
O2': (-104.581,-69.693,46.937)
N1: (-104.430,-68.824,43.896)
O4: (-104.985,-65.286,42.026)
O2: (-102.414,-68.036,44.571)
C6: (-105.569,-68.578,43.194)
C5: (-105.799,-67.428,42.555)
O3': (-103.878,-72.285,46.575)
OP1: (-101.548,-64.883,43.807)
OP2: (-99.283,-63.891,43.268)
C3': (-99.828,-68.729,46.476)
C1': (-100.751,-68.458,48.600)
C5': (-100.358,-66.257,46.021)
O4': (-100.197,-67.201,48.256)
C8: (-103.167,-67.878,48.923)
O2': (-101.317,-70.503,47.407)
C6: (-103.936,-68.376,52.308)
C5: (-103.461,-68.229,50.991)
C4: (-102.129,-68.517,50.759)
P: (-100.092,-65.060,43.675)
C4': (-99.654,-67.275,46.899)
C2': (-101.067,-69.115,47.272)
C2: (-101.783,-69.030,52.888)
N1: (-103.052,-68.789,53.262)
N3: (-101.229,-68.927,51.674)
N6: (-105.220,-68.125,52.617)
N7: (-104.105,-67.818,49.829)
N9: (-101.943,-68.256,49.421)
O5': (-99.500,-65.733,45.003)
O3': (-98.721,-69.486,46.949)
OP2: (-99.283,-63.891,43.268)
C3': (-99.828,-68.729,46.476)
C1': (-100.751,-68.458,48.600)
C5': (-100.358,-66.257,46.021)
O4': (-100.197,-67.201,48.256)
C8: (-103.167,-67.878,48.923)
O2': (-101.317,-70.503,47.407)
C6: (-103.936,-68.376,52.308)
C5: (-103.461,-68.229,50.991)
C4: (-102.129,-68.517,50.759)
P: (-100.092,-65.060,43.675)
C4': (-99.654,-67.275,46.899)
C2': (-101.067,-69.115,47.272)
C2: (-101.783,-69.030,52.888)
N1: (-103.052,-68.789,53.262)
N3: (-101.229,-68.927,51.674)
N6: (-105.220,-68.125,52.617)
N7: (-104.105,-67.818,49.829)
N9: (-101.943,-68.256,49.421)
O5': (-99.500,-65.733,45.003)
O3': (-98.721,-69.486,46.949)
Image (generated by PyMOL):